Mercurial > repos > fubar > clustalw

diff clustalw-76de6971a0de/rgclustal/tool_dependencies.xml @ 1:cf59a9ae0efe draft

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From test toolshed - appears to install fine.
author fubar
date Sun, 01 Dec 2013 19:57:03 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/clustalw-76de6971a0de/rgclustal/tool_dependencies.xml	Sun Dec 01 19:57:03 2013 -0500
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+<?xml version="1.0" encoding="UTF-8"?>
+<tool_dependency>
+    <package name="clustalw" version="2.1">
+        <install version="1.0"> 
+           <actions>
+                <action type="download_by_url">http://www.clustal.org/download/current/clustalw-2.1.tar.gz</action>
+                <action type="shell_command">./configure &amp;&amp; make</action>
+                <action type="move_file"><source>src/clustalw2</source><destination>$INSTALL_DIR</destination></action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
+                </action>
+           </actions>
+        </install>
+        <readme>Installs clustalw from http://www.clustal.org/download/current/clustalw-2.1.tar.gz
+       </readme>
+    </package>
+</tool_dependency>
+
+