--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/ui/assets/config/executor/ncbi-sge.config	Sat Aug 03 11:16:53 2024 +0000
@@ -0,0 +1,29 @@
+// This is an example of SGE executor configuration
+// It is specific for internal NCBI use, you need to supply -P and -A parameters specific to your HPC
+// account. Keep -V, maybe adjust osverfull parameters (set to use Alma Linux 8)
+// This configuration uses binaries setup directly on network accessible drive. We currently don't support
+// such configurations for third party, use docker or singularity for this. Uncomment corresponding line below
+//docker.enabled = true
+//singularity.enabled = true
+process {
+    executor = 'sge'
+    clusterOptions = "-m n -V -P progressive -w n -A annotations-euk -l express=TRUE,h_vmem=INFINITY,m_core=12,osverfull='8*'"
+}
+env.GP_HOME="/netmnt/vast01/egapx/bin/"
+env.PATH = "/netmnt/vast01/egapx/bin:/netmnt/vast01/egapx/bin/gp:/netmnt/vast01/egapx/bin/third-party/STAR/bin/Linux_x86_64:\$PATH"
+process {
+    memory = 60.GB
+    time = 3.h
+
+    withLabel: 'big_job' {
+        memory = 120.GB
+    }
+
+    withLabel: 'huge_job' {
+        memory = 200.GB
+    }
+
+    withLabel: 'long_job' {
+        time = 6.h
+    }
+}