Mercurial > repos > fubar > egapx_runner
view ui/assets/config/process_resources.config @ 5:6effccc966d0 draft
planemo upload for repository https://github.com/ncbi/egapx commit 9e59da535540cb4d5c1c412bb2b0969744dfb0b0
author | fubar |
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date | Sun, 04 Aug 2024 01:59:37 +0000 |
parents | d9c5c5b87fec |
children |
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// Part of nextflow config describing resource requirements for EGAPx processes // We rely on labels to define 3 tiers of processes - default, big, and huge. // Make sure that executor you use supports job memory and CPU requirements process { memory = 60.GB cpus = 7 time = 6.h errorStrategy = 'retry' maxRetries = 3 withLabel: 'big_job' { memory = 120.GB cpus = 15 } withLabel: 'huge_job' { memory = 200.GB cpus = 31 } withLabel: 'long_job' { time = 16.h } } profiles { stubrun { process { memory = 1.GB cpus = 1 time = 1.h withLabel: 'big_job' { memory = 1.GB cpus = 1 } withLabel: 'huge_job' { memory = 1.GB cpus = 1 } withLabel: 'long_job' { time = 1.h } } } }