Mercurial > repos > fubar > jbrowse2

annotate 4f27993eab7751041e8c72047be3ea53_0.bw @ 7:b04fd993b31e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
author fubar
date Wed, 17 Jan 2024 07:50:52 +0000
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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2 <!DOCTYPE HTML>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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3 <html lang="en">
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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4 <!--js-app.mako-->
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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5 <head>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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6 <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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8 <!-- Set meta description -->
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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10 <meta name="description" content="Log in to Galaxy to get access to more tools and resources. Register now for a free account." />
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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12 <title>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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13 Galaxy
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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14 | ToolFactoryDev
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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15 </title>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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17 <link rel="index" href="/"/>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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19 <link href="/static/dist/base.css?v=1704404015" media="screen" rel="stylesheet" type="text/css" />
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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20 <link href="/static/style/jquery-ui/smoothness/jquery-ui.css?v=1704404015" media="screen" rel="stylesheet" type="text/css" />
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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21 </head>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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23 <body scroll="no" class="full-content">
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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24 <!-- Provide mount point for application -->
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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25 <main>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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26 <div id="app"></div>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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27 </main>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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30 <noscript>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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31 <div class="overlay overlay-background noscript-overlay">
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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32 <div>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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33 <h3 class="title">Javascript Required for Galaxy</h3>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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34 <div>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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35 The Galaxy analysis interface requires a browser with Javascript enabled.<br>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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36 Please enable Javascript and refresh this page.
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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37 </div>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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38 </div>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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39 </div>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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40 </noscript>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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43 <script src="/static/dist/libs.bundled.js?v=1704404015" type="text/javascript"></script>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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44 <script src="/static/dist/analysis.bundled.js?v=1704404015" type="text/javascript"></script>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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48 <script type="text/javascript">
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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49 console.debug("Initializing javascript application:", "app");
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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51 // js-app.mako
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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52 var options = {"root": "/", "user": {"id": null, "total_disk_usage": 0.0, "nice_total_disk_usage": "0 bytes", "quota_percent": null}, "config": {"enable_notification_system": false, "welcome_directory": "plugins/welcome_page/new_user/static/topics/", "enable_celery_tasks": false, "admin_tool_recommendations_path": "/evol/galaxytf23.1.3/config/tool_recommendations_overwrite.yml", "version_extra": null, "tool_training_recommendations_api_url": "https://training.galaxyproject.org/training-material/api/top-tools.json", "expose_user_email": false, "simplified_workflow_run_ui_job_cache": "off", "toolbox_auto_sort": true, "is_admin_user": false, "message_box_class": "info", "show_welcome_with_login": true, "default_locale": "auto", "visualizations_visible": true, "interactivetools_enable": false, "ga_code": null, "allow_user_creation": false, "enable_account_interface": true, "nginx_upload_path": null, "quota_url": "https://galaxyproject.org/support/account-quotas/", "matomo_site_id": null, "object_store_ids_allowing_selection": [], "wiki_url": "https://galaxyproject.org/", "fixed_delegated_auth": false, "use_remote_user": null, "brand": "ToolFactoryDev", "screencasts_url": "https://www.youtube.com/c/galaxyproject", "helpsite_url": "https://help.galaxyproject.org/", "object_store_allows_id_selection": false, "enable_tool_recommendations": false, "oidc": {}, "plausible_domain": null, "simplified_workflow_run_ui": "prefer", "aws_estimate": false, "user_library_import_dir_available": false, "ftp_upload_site": null, "quota_source_labels": [], "tool_recommendation_model_path": "https://github.com/galaxyproject/galaxy-test-data/raw/master/tool_recommendation_model_v_0.2.hdf5", "enable_quotas": false, "markdown_to_pdf_available": false, "post_user_logout_href": "/root/login?is_logout_redirect=true", "enable_unique_workflow_defaults": false, "enable_oidc": false, "citations_export_message_html": "When writing up your analysis, remember to include all references that should be cited in order to completely describe your work. Also, please remember to <a href=\"https://galaxyproject.org/citing-galaxy\">cite Galaxy<\/a>.", "single_user": false, "python": [3, 10], "enable_beacon_integration": false, "logo_src": "/static/toolfactorylogo.png", "enable_tool_source_display": false, "require_login": true, "datatypes_disable_auto": false, "inactivity_box_content": "Your account has not been activated yet. Feel free to browse around and see what's available, but you won't be able to upload data or run jobs until you have verified your email address.", "mailing_join_addr": null, "topk_recommendations": 20, "terms_url": null, "logo_url": "/", "server_startttime": 1704404015, "panel_views": {"default": {"id": "default", "model_class": "type", "name": "Full Tool Panel", "description": "Galaxy's fully configured toolbox panel with all sections, tools, and configured workflows loaded.", "view_type": "default", "searchable": true}, "ontology:edam_operations": {"id": "ontology:edam_operations", "model_class": "EdamToolPanelView", "name": "EDAM Operations", "description": "Tools are grouped using annotated EDAM operation information (if available).", "view_type": "ontology", "searchable": true}, "ontology:edam_topics": {"id": "ontology:edam_topics", "model_class": "EdamToolPanelView", "name": "EDAM Topics", "description": "Tools are grouped using annotated EDAM topic information (if available).", "view_type": "ontology", "searchable": true}}, "message_box_visible": false, "cookie_domain": null, "allow_user_dataset_purge": true, "file_sources_configured": false, "overwrite_model_recommendations": false, "upload_from_form_button": "always-off", "message_box_content": null, "prefer_custos_login": false, "version_minor": "3", "support_url": "https://galaxyproject.org/support/", "registration_warning_message": "Please register only one account - we provide this service free of charge and have limited computational resources. Multi-accounts are tracked and will be subjected to account termination and data deletion.", "select_type_workflow_threshold": -1, "release_doc_base_url": "https://docs.galaxyproject.org/en/release_", "plausible_server": null, "lims_doc_url": "https://usegalaxy.org/u/rkchak/p/sts", "tool_training_recommendations_link": "https://training.galaxyproject.org/training-material/by-tool/{training_tool_identifier}.html", "citation_url": "https://galaxyproject.org/citing-galaxy", "matomo_server": null, "chunk_upload_size": 10485760, "welcome_url": "/static/welcome.html", "logo_src_secondary": null, "has_user_tool_filters": true, "remote_user_logout_href": null, "version_major": "23.1", "server_mail_configured": false, "default_panel_view": "default", "tool_training_recommendations": true, "simplified_workflow_run_ui_target_history": "prefer_current", "enable_beta_markdown_export": false, "allow_user_impersonation": false, "themes": {}, "active_view": "analysis", "enable_webhooks": true, "show_inactivity_warning": false, "tool_shed_urls": ["https://toolshed.g2.bx.psu.edu/"], "tool_dynamic_configs": ["/evol/galaxytf23.1.3/local_tools/local_tool_conf.xml"], "stored_workflow_menu_entries": []}, "params": {"redirect": "/datasets/cc4287507a7e4aae/display/4f27993eab7751041e8c72047be3ea53_0.bw"}, "session_csrf_token": "a403b55f14053e4e", "redirect": "/datasets/cc4287507a7e4aae/display/4f27993eab7751041e8c72047be3ea53_0.bw"};
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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53 var bootstrapped = {};
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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54
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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55 config.set({
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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56 options: options,
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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57 bootstrapped: bootstrapped,
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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58 form_input_auto_focus: false
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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59 });
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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60 </script>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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64 <script type="text/javascript">
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66 var sentry = {};
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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67
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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68 config.set({
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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69 sentry: sentry
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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70 });
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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72 </script>
b04fd993b31e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 53a108d8153c955044ae7eb8cb06bdcfd0036717
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