Mercurial > repos > fubar > jbrowse2

comparison jbrowse2.xml @ 45:0ec526d2d8c1 draft

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planemo upload for repository https://github.com/usegalaxy-eu/temporary-tools/tree/master/jbrowse2 commit 015c77d802595a85f78739ee2316b452c519c796-dirty
author fubar
date Fri, 01 Mar 2024 05:15:41 +0000
parents 7e14b3f1f8e1
children 4181e97c70a7
comparison
equal deleted inserted replaced
44:bea0916e1080 45:0ec526d2d8c1
100 #for $track in $tg.data_tracks: 100 #for $track in $tg.data_tracks:
101 <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}"> 101 <track cat="${tg.category}" format="${track.data_format.data_format_select}" visibility="${track.data_format.track_visibility}">
102 #if $track.data_format.data_format_select != "sparql": 102 #if $track.data_format.data_format_select != "sparql":
103 <files> 103 <files>
104 #for $dataset in $track.data_format.annotation: 104 #for $dataset in $track.data_format.annotation:
105 #if $dataset:
105 <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.name}"> 106 <trackFile path="${dataset}" ext="${dataset.ext}" label="${dataset.name}">
106 <metadata> 107 <metadata>
107 <dataset id="${__app__.security.encode_id($dataset.id)}" hid="${dataset.hid}" 108 <dataset id="${__app__.security.encode_id($dataset.id)}" hid="${dataset.hid}"
108 size="${dataset.get_size(nice_size=True)}" 109 size="${dataset.get_size(nice_size=True)}"
109 edam_format="${dataset.datatype.edam_format}" 110 edam_format="${dataset.datatype.edam_format}"
134 tool_id="${dataset.creating_job.tool_id}" 135 tool_id="${dataset.creating_job.tool_id}"
135 tool_version="${dataset.creating_job.tool_version}" 136 tool_version="${dataset.creating_job.tool_version}"
136 /> 137 />
137 </metadata> 138 </metadata>
138 </trackFile> 139 </trackFile>
140 #end if
139 141
140 #end for 142 #end for
141 </files> 143 </files>
142 #else 144 #else
143 <track cat="${tg.category}" format="sparql" visibility="off"> 145 <track cat="${tg.category}" format="sparql" visibility="off">