Mercurial > repos > fubar > jbrowse2

comparison jbrowse2.py @ 83:746eae952c18 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 2dad2139324940fbff8aa089a72641800211e2d9-dirty
author fubar
date Wed, 03 Apr 2024 02:47:22 +0000
parents e9bcbed05108
children 3b2ff9864995
comparison
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82:c22c34695f1a 83:746eae952c18
1086 categ = trackData["category"] 1086 categ = trackData["category"]
1087 useuri = trackData["useuri"].lower() == "yes" 1087 useuri = trackData["useuri"].lower() == "yes"
1088 if useuri: 1088 if useuri:
1089 url = data 1089 url = data
1090 else: 1090 else:
1091 url = tId 1091 url = tId + '.gz'
1092 dest = "%s/%s" % (self.outdir, url) 1092 dest = "%s/%s" % (self.outdir, url)
1093 self._sort_bed(data, dest) 1093 self._sort_bed(data, dest)
1094 trackDict = { 1094 trackDict = {
1095 "type": "FeatureTrack", 1095 "type": "FeatureTrack",
1096 "trackId": tId, 1096 "trackId": tId,