Mercurial > repos > fubar > jbrowse2

comparison jbrowse2.xml @ 103:dc3fe98e7b37 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit a1537aea75fc902d0e38c0b7c698830a939648b1-dirty
author fubar
date Sat, 22 Jun 2024 06:17:01 +0000
parents e4ba5f1da6ef
children a074cd6b5905
comparison
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102:099370690407 103:dc3fe98e7b37
223 <type>${track.data_format.jbstyle.track_style.display}</type> 223 <type>${track.data_format.jbstyle.track_style.display}</type>
224 #if str($track.data_format.jbstyle.track_style.display) in ["LinearBasicDisplay", "LinearVariantDisplay"]: 224 #if str($track.data_format.jbstyle.track_style.display) in ["LinearBasicDisplay", "LinearVariantDisplay"]:
225 <trackShowLabels>${track.data_format.jbstyle.track_style.show_labels}</trackShowLabels> 225 <trackShowLabels>${track.data_format.jbstyle.track_style.show_labels}</trackShowLabels>
226 <trackShowDescriptions>${track.data_format.jbstyle.track_style.show_descriptions}</trackShowDescriptions> 226 <trackShowDescriptions>${track.data_format.jbstyle.track_style.show_descriptions}</trackShowDescriptions>
227 #end if 227 #end if
228 228 #else if str($track.data_format.data_format_select) == "bigwig":
229 <type>${track.data_format.jbstyle.track_style.display}</type>
230 <color>${track.data_format.jbstyle.track_style.color}</color>
231 <autoscale>${track.data_format.jbstyle.track_style.autoscale}</autoscale>
232 <resolution>${track.data_format.jbstyle.track_style.resolution}</resolution>
233 <summaryScoreMode>${track.data_format.jbstyle.track_style.summaryScoreMode}</summaryScoreMode>
234 <filled>${track.data_format.jbstyle.track_style.filled}</filled>
235 <scaleType>${track.data_format.jbstyle.track_style.scaleType}</scaleType>
236 <displayCrossHatches>${track.data_format.jbstyle.track_style.displayCrossHatches}</displayCrossHatches>
237 <minScore>${track.data_format.jbstyle.track_style.minScore}</minScore>
238 <maxScore>${track.data_format.jbstyle.track_style.maxScore}</maxScore>
229 #end if 239 #end if
230 #if str($track.data_format.data_format_select) in ["bam", "cram"]: 240 #if str($track.data_format.data_format_select) in ["bam", "cram"]:
231 <type>LinearAlignmentsDisplay</type> 241 <type>LinearAlignmentsDisplay</type>
232 #end if 242 #end if
233 #if str($track.data_format.data_format_select) in ["hic", "cool", "mcool", "scool"]: 243 #if str($track.data_format.data_format_select) in ["hic", "cool", "mcool", "scool"]: