jbrowse2: x/static/js/1822.2cbe112a.chunk.js.map comparison

comparison x/static/js/1822.2cbe112a.chunk.js.map @ 127:fbabf7498471 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 116b1a4bbd62251ad552306df2dc8aa8f46c6721

author	fubar
date	Mon, 07 Oct 2024 02:11:55 +0000
parents	49f3d3878413
children

comparison

equal deleted inserted replaced

126:fd0fc6fdc7c5	127:fbabf7498471
	1 {"version":3,"file":"static/js/1822.2cbe112a.chunk.js","mappings":"kNAcA,SAASA,EAAYC,GACnB,MAAMC,EAAWD,EAAIE,MAAMF,EAAIG,YAAY,KAAO,GAClD,OAAOF,EAASC,MAAM,EAAGD,EAASE,YAAY,KAChD,CAUe,MAAMC,UAA2BC,EAAAA,uBAC9C,oBAA6B,CAC3B,gBACA,gBACA,kBAGF,iBAAaC,GACX,MAAMC,EAAgBC,KAAKD,cAC3B,IAAKA,EACH,MAAM,IAAIE,MAAM,8BAElB,IAAIC,EAAWF,KAAKG,QAAQ,eAY5B,OAXKD,GAAUE,SAEbF,EADgBF,KAAKG,QAAQ,WACVE,KAAIC,IAAS,CAC9BC,KAAM,gBACNC,OAAQjB,EAAYe,GACpBG,eAAgB,CACdjB,IAAKc,QAKJI,QAAQC,IACbT,EAASG,KAAIO,UACX,MAAMC,SAAqBd,EAAce,IACtCD,YACH,MAAO,CACLL,OAAQM,EAAKC,MAAQF,EAAYG,MAC9BF,EACHD,cACD,IAGP,CAGA,iBAAaI,CAAYC,GACvB,MAAMC,QAAiBnB,KAAKF,cACtBsB,QAAiBV,QAAQC,IAC7BQ,EAASd,KAAIgB,GAAKA,EAAER,YAAYI,YAAYC,MAE9C,MAAO,IAAI,IAAII,IAAIF,EAASG,QAC9B,CAEA,oBAAaC,CAAeN,GAC1B,MAAMC,QAAiBnB,KAAKF,cACtB2B,SACGf,QAAQC,IAEbQ,EAASd,KAAIqB,GAAOA,EAAIb,YAAYW,iBAAiBN,OAEvDS,QAAOC,KAAOA,IAGhB,MAAO,CAAEC,UAFQC,EAAAA,EAAAA,KAAIL,EAAMpB,KAAI0B,GAAKA,EAAEF,YAEnBG,UADFC,EAAAA,EAAAA,KAAIR,EAAMpB,KAAI0B,GAAKA,EAAEC,YAExC,CAEOE,WAAAA,CAAYC,EAAgBjB,EAAsB,CAAC,GACxD,OAAOkB,EAAAA,EAAAA,mBAA0BxB,UAC/B,MAAMO,QAAiBnB,KAAKF,eAC5BuC,EAAAA,EAAAA,MACKlB,EAASd,KAAIqB,GACdA,EAAIb,YAAYqB,YAAYC,EAAQjB,GAAMoB,MACxCjC,EAAAA,EAAAA,IAAIkC,GAEFA,EAAEC,IAAI,UACFD,EACA,IAAIE,EAAAA,cAAc,IACbF,EAAEG,SACLC,SAAU,GAAGjB,EAAIlB,UAAU+B,EAAEvB,OAC7BR,OAAQkB,EAAIlB,eAKxBoC,UAAUC,EAAS,GACpB3B,EAAK4B,OACV,CAGA,uCAAMC,CAAkCC,GACtC,MAAO,CAAEC,eAAgB,EAC3B,CAIA,gBAAMC,GAEJ,aADuBlD,KAAKF,eACZO,KAAI,EAAGQ,cAAaL,SAAQO,UAASoC,MAAW,CAC9DpC,KAAMP,EACN4C,OAAQrC,KACLoC,KAEP,CAEOE,aAAAA,GAAuB,E","sources":["../../../plugins/wiggle/src/MultiWiggleAdapter/MultiWiggleAdapter.ts"],"sourcesContent":["import {\n BaseFeatureDataAdapter,\n BaseOptions,\n} from '@jbrowse/core/data_adapters/BaseAdapter'\nimport { AugmentedRegion as Region } from '@jbrowse/core/util/types'\nimport { ObservableCreate } from '@jbrowse/core/util/rxjs'\nimport { SimpleFeature, Feature, min, max } from '@jbrowse/core/util'\nimport { merge } from 'rxjs'\nimport { map } from 'rxjs/operators'\n\ninterface WiggleOptions extends BaseOptions {\n resolution?: number\n}\n\nfunction getFilename(uri: string) {\n const filename = uri.slice(uri.lastIndexOf('/') + 1)\n return filename.slice(0, filename.lastIndexOf('.'))\n}\n\ninterface AdapterEntry {\n dataAdapter: BaseFeatureDataAdapter\n source: string\n [key: string]: unknown\n}\n\ntype MaybeStats = { scoreMin: number; scoreMax: number } \| undefined\n\nexport default class MultiWiggleAdapter extends BaseFeatureDataAdapter {\n public static capabilities = [\n 'hasResolution',\n 'hasLocalStats',\n 'hasGlobalStats',\n ]\n\n public async getAdapters(): Promise<AdapterEntry[]> {\n const getSubAdapter = this.getSubAdapter\n if (!getSubAdapter) {\n throw new Error('no getSubAdapter available')\n }\n let subConfs = this.getConf('subadapters')\n if (!subConfs?.length) {\n const entries = this.getConf('bigWigs') as string[]\n subConfs = entries.map(entry => ({\n type: 'BigWigAdapter',\n source: getFilename(entry),\n bigWigLocation: {\n uri: entry,\n },\n }))\n }\n\n return Promise.all(\n subConfs.map(async (conf: any) => {\n const dataAdapter = (await getSubAdapter(conf))\n .dataAdapter as BaseFeatureDataAdapter\n return {\n source: conf.name \|\| dataAdapter.id,\n ...conf,\n dataAdapter,\n }\n }),\n )\n }\n\n // note: can't really have dis-agreeing refNames\n public async getRefNames(opts?: BaseOptions) {\n const adapters = await this.getAdapters()\n const allNames = await Promise.all(\n adapters.map(a => a.dataAdapter.getRefNames(opts)),\n )\n return [...new Set(allNames.flat())]\n }\n\n public async getGlobalStats(opts?: BaseOptions) {\n const adapters = await this.getAdapters()\n const stats = (\n (await Promise.all(\n // @ts-expect-error\n adapters.map(adp => adp.dataAdapter.getGlobalStats?.(opts)),\n )) as MaybeStats[]\n ).filter(f => !!f)\n const scoreMin = min(stats.map(s => s.scoreMin))\n const scoreMax = max(stats.map(s => s.scoreMax))\n return { scoreMin, scoreMax }\n }\n\n public getFeatures(region: Region, opts: WiggleOptions = {}) {\n return ObservableCreate<Feature>(async observer => {\n const adapters = await this.getAdapters()\n merge(\n ...adapters.map(adp =>\n adp.dataAdapter.getFeatures(region, opts).pipe(\n map(p =>\n // add source field if it does not exist\n p.get('source')\n ? p\n : new SimpleFeature({\n ...p.toJSON(),\n uniqueId: `${adp.source}-${p.id()}`,\n source: adp.source,\n }),\n ),\n ),\n ),\n ).subscribe(observer)\n }, opts.signal)\n }\n\n // always render bigwig instead of calculating a feature density for it\n async getMultiRegionFeatureDensityStats(_regions: Region[]) {\n return { featureDensity: 0 }\n }\n\n // in another adapter type, this could be dynamic depending on region or\n // something, but it is static for this particular multi-wiggle adapter type\n async getSources() {\n const adapters = await this.getAdapters()\n return adapters.map(({ dataAdapter, source, name, ...rest }) => ({\n name: source,\n __name: name,\n ...rest,\n }))\n }\n\n public freeResources(): void {}\n}\n"],"names":["getFilename","uri","filename","slice","lastIndexOf","MultiWiggleAdapter","BaseFeatureDataAdapter","getAdapters","getSubAdapter","this","Error","subConfs","getConf","length","map","entry","type","source","bigWigLocation","Promise","all","async","dataAdapter","conf","name","id","getRefNames","opts","adapters","allNames","a","Set","flat","getGlobalStats","stats","adp","filter","f","scoreMin","min","s","scoreMax","max","getFeatures","region","ObservableCreate","merge","pipe","p","get","SimpleFeature","toJSON","uniqueId","subscribe","observer","signal","getMultiRegionFeatureDensityStats","_regions","featureDensity","getSources","rest","__name","freeResources"],"sourceRoot":""}

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p\n : new SimpleFeature({\n ...p.toJSON(),\n uniqueId: `${adp.source}-${p.id()}`,\n source: adp.source,\n }),\n ),\n ),\n ),\n ).subscribe(observer)\n }, opts.signal)\n }\n\n // always render bigwig instead of calculating a feature density for it\n async getMultiRegionFeatureDensityStats(_regions: Region[]) {\n return { featureDensity: 0 }\n }\n\n // in another adapter type, this could be dynamic depending on region or\n // something, but it is static for this particular multi-wiggle adapter type\n async getSources() {\n const adapters = await this.getAdapters()\n return adapters.map(({ dataAdapter, source, name, ...rest }) => ({\n name: source,\n __name: name,\n ...rest,\n }))\n }\n\n public freeResources(): void {}\n}\n"],"names":["getFilename","uri","filename","slice","lastIndexOf","MultiWiggleAdapter","BaseFeatureDataAdapter","getAdapters","getSubAdapter","this","Error","subConfs","getConf","length","map","entry","type","source","bigWigLocation","Promise","all","async","dataAdapter","conf","name","id","getRefNames","opts","adapters","allNames","a","Set","flat","getGlobalStats","stats","adp","filter","f","scoreMin","min","s","scoreMax","max","getFeatures","region","ObservableCreate","merge","pipe","p","get","SimpleFeature","toJSON","uniqueId","subscribe","observer","signal","getMultiRegionFeatureDensityStats","_regions","featureDensity","getSources","rest","__name","freeResources"],"sourceRoot":""}

Mercurial > repos > fubar > jbrowse2

comparison x/static/js/1822.2cbe112a.chunk.js.map @ 127:fbabf7498471 draft