Mercurial > repos > fubar > jbrowse2
diff macros.xml @ 112:56f9a6e0fe80 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 566509061b742b73c8dd1a1db6813fbf6a7a3792
author | bgruening |
---|---|
date | Thu, 04 Jul 2024 08:40:21 +0000 |
parents | 5d1259b88c27 |
children | 878c27dfea9d |
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--- a/macros.xml Tue Jul 02 05:08:17 2024 +0000 +++ b/macros.xml Thu Jul 04 08:40:21 2024 +0000 @@ -108,7 +108,7 @@ <param name="zipOut" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Create a zip archive for downloading rather than viewing" help="Default is to make an interactive browser appear when the 'eye' icon is activated"/> <param name="defaultLocation" type="text" value="" label="Subset to display to new users" help="Initial subset to be shown for users who have never visited the browser before. Example: 'ctgA:1234..5678"/> <param name="session_name" type="text" value="New JBrowse2 session" label="Session name" help="Displayed at the top of the window"/> - <param name="bpPerPx" type="integer" value="50" label="Base pairs per display pixel for default view" help="Make the default window show more or less BP of sequence. For some reason not automatable in JB2, sorry"/> + <param name="bpPerPx" type="integer" min="1" value="50" label="Base pairs per display pixel for default view" help="Make the default window show more or less BP of sequence. For some reason not automatable in JB2, sorry"/> <param name="enableAnalytics" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Enable analytics" help="Will send usage data to Google Analytics, see https://github.com/GMOD/jbrowse-components/issues/1166"/> <param name="primary_color" type="color" value="#0D233F" label="Primary color"> <sanitizer> @@ -240,7 +240,8 @@ <option value="LinearPileupDisplay">LinearPileupDisplay - good for dense tracks at scale</option> <option value="LinearArcDisplay">LinearArcDisplay</option> </param> - <param name="usebedscore" type="boolean" truevalue="true" falsevalue="false" checked="true" label="Use column 5 as a score for the display if bed format"/> + <param name="usebedscore" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Use column 5 as a score for the display if bed format" + help="The *Bigwig extremes to bed features* tool generates bed files with scores 1 or -1. This option renders them red and blue"/> </section> </xml> <xml name="track_styling_feature">