diff jbrowse2.xml @ 127:fbabf7498471 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 116b1a4bbd62251ad552306df2dc8aa8f46c6721
author fubar
date Mon, 07 Oct 2024 02:11:55 +0000
parents 49f3d3878413
children 1efcc387bef4
line wrap: on
line diff
--- a/jbrowse2.xml	Sun Oct 06 07:16:36 2024 +0000
+++ b/jbrowse2.xml	Mon Oct 07 02:11:55 2024 +0000
@@ -666,8 +666,11 @@
                     <has_archive_member path="merlinlastz.maf_6.sorted.bed.gz.tbi"/>
                     <has_archive_member path="merlin.blastxml_7.gz"/>
                     <has_archive_member path="dm3test.cool_9.hic"/>
-                    <has_archive_member path="peach-grape-map.paf_10"/>
+                    <has_archive_member path="peach-grape-map.paf_10.pif.gz"/>
+                    <has_archive_member path="peach-grape-map.paf_10.pif.gz.tbi"/>
                     <has_archive_member path="arabgrapepeach.paf_11"/>
+                    <has_archive_member path="arabgrapepeach.paf_11.pif.gz"/>
+                    <has_archive_member path="arabgrapepeach.paf_11.pif.gz.tbi"/>
                     <has_archive_member path="Merlin.fa.gz.fai"/>
                     <has_archive_member path="dm3.fa.fa.gz.fai"/>
                     <has_archive_member path="Ppersica1.fa.fa.gz"/>
@@ -677,7 +680,9 @@
                     <has_archive_member path="Vvinifera1.fa.fa.gz"/>
                     <has_archive_member path="Vvinifera1.fa.fa.gz.gzi"/>
                     <has_archive_member path="config.json">
-                        <has_json_property_with_text property="name" text="Merlin"/>
+                        <has_json_property_with_text property="type" text="PairwiseIndexedPAFAdapter"/>
+                        <has_json_property_with_text property="uri" text="peach-grape-map.paf_10.pif.gz.tbi"/>
+                        <has_json_property_with_text property="uri" text="peach-grape-map.paf_10.pif.gz"/>
                     </has_archive_member>
                 </assert_contents>
             </output>