Mercurial > repos > fubar > jbrowse2dev

comparison jbrowse2/jbrowse2.xml @ 9:6a41f87b5d7f draft

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Uploaded
author fubar
date Fri, 05 Jan 2024 05:06:21 +0000
parents 234cf4490901
children 0db895a99532
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8:1e6128ccc82b 9:6a41f87b5d7f
397 ===================== 397 =====================
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399 A JBrowse2 history item can be opened by viewing it (the "eye" icon). 399 A JBrowse2 history item can be opened by viewing it (the "eye" icon).
400 They can also be downloaded as archives ("floppy disk" icon) to share and for local viewing. 400 They can also be downloaded as archives ("floppy disk" icon) to share and for local viewing.
401 One extra step is required before they can be viewed. A local python web server must be started using a script included in each archive. 401 One extra step is required before they can be viewed. A local python web server must be started using a script included in each archive.
402 Unpack the archive (tar -xvzf [filename].tgz) and the first level directory will contain a file named "servejb2.py" 402 Unzip the archive (*unzip [filename].zip*) and change to the first level directory. It contains a file named "servejb2.py"
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404 Assuming you have python3 installed, running 404 Assuming you have python3 installed, running:
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406 *python3 servjb2.py* 406 *python3 servjb2.py*
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408 will serve the unarchived JBrowse2 configuration, so it can be browsed by pointing a web browser to localhost:8080 408 will serve the unarchived JBrowse2 configuration, so it can be browsed by pointing a web browser to localhost:8080
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