view seqrequester/src/Makefile.boilermake @ 1:1085e094cf5f draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/microsatbed commit 7ceb6658309a7ababe622b5d92e729e5470e22f0-dirty
author fubar
date Sat, 13 Jul 2024 12:39:06 +0000
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# -*- Makefile -*-
#
# boilermake: A reusable, but flexible, boilerplate Makefile.
#
# Copyright 2008, 2009, 2010 Dan Moulding, Alan T. DeKok
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program.  If not, see <http://www.gnu.org/licenses/>.

#
# Significantly modified for Marbl projects.  Get the original from
#   https://github.com/dmoulding/boilermake
#


#
#  Set paths for building and installing.  If DESTDIR is defined,
#  use that, otherwise, use the directory just above us.
#
#  We used to use "OSTYPE-MACHINETYPE" instead of "build" to allow
#  multi-platform builds.  We now make the user set DESTDIR for that
#  functionality.  The three variables are now just diagnostic info with some
#  historical baggage (but even more was removed, like "Power Macintosh"
#  detection).
#
ifeq "$(strip ${DESTDIR})" ""
  BUILD_DIR    := $(realpath ..)/build/obj
  TARGET_DIR   := $(realpath ..)/build
else
  BUILD_DIR    := $(DESTDIR)/build/obj
  TARGET_DIR   := $(DESTDIR)/build
endif

OSTYPE      :=                      $(shell echo `uname`)
OSVERSION   :=                      $(shell echo `uname -r`))
MACHINETYPE := $(subst x86_64,amd64,$(shell echo `uname -m`))

#
# Define the source file extensions that we know how to handle.
#
C_SRC_EXTS   := %.c
CXX_SRC_EXTS := %.C %.cc %.cp %.cpp %.CPP %.cxx %.c++
JAVA_EXTS    := %.jar %.tar
ALL_SRC_EXTS := ${C_SRC_EXTS} ${CXX_SRC_EXTS} ${JAVA_EXTS}

#
# Initialize internal variables.
#
ALL_TGTS  :=
DIR_STACK :=
TGT_STACK :=

########################################
#
#  The single entry point to create all the targets and rules and everything.
#
#    $(eval $(call BOILERMAKE))
#
########################################

define BOILERMAKE

  # Add a new target rule for each user-defined target.
  $(foreach TGT,${ALL_TGTS},\
    $(eval $(call ADD_TARGET_RULE,${TGT})))

  # Add pattern rule(s) for creating compiled object code from C source.
  $(foreach TGT,${ALL_TGTS},\
    $(foreach EXT,${C_SRC_EXTS},\
      $(eval $(call ADD_OBJECT_RULE,${BUILD_DIR}/$(call CANONICAL_PATH,${TGT}),\
               ${EXT},$${COMPILE_C_CMDS}))))

  # Add pattern rule(s) for creating compiled object code from C++ source.
  $(foreach TGT,${ALL_TGTS},\
    $(foreach EXT,${CXX_SRC_EXTS},\
      $(eval $(call ADD_OBJECT_RULE,${BUILD_DIR}/$(call CANONICAL_PATH,${TGT}),\
               ${EXT},$${COMPILE_CXX_CMDS}))))

  # Add "clean" rules to remove all build-generated files.
  $(foreach TGT,${ALL_TGTS},\
    $(eval $(call ADD_CLEAN_RULE,${TGT})))

  # Include generated rules that define additional (header) dependencies
  # (but don't complain if that file doesn't exist).
  $(foreach TGT,${ALL_TGTS},\
    $(eval -include ${${TGT}_DEPS}))

  # Define more targets to copy files to the target directory.
  $(call ADD_FILE_COPY_RULES,${EXECUTABLES},executable)
  $(call ADD_FILE_COPY_RULES,${FILES},)
endef


############################################################
#
#  boilermake internal functions below.
#
############################################################

#
#  Adds a new rule and phony target for cleaning the specified target
#  (removing its build-generated files).  Use with EVAL.
#
define ADD_CLEAN_RULE
  doclean: doclean-${1}
  .PHONY: doclean-${1}
  doclean-${1}:
		$$(strip rm -f ${TARGET_DIR}/${1} $${${1}_OBJS:%.o=%.[doP]})
		$${${1}_POSTCLEAN}
endef

#  ADD_FILE_COPY_RULES adds rules to copy source files directly to the
#  TARGET_DIR and optionally make them executable.  A rule to remove the
#  copied file (on 'make clean') is also added.  It expects a list of files
#  to copy and their destination:
#
#    EXECUTABLES += scripts/a         -> bin/b       #  These go in main.mk
#
#    FILES       += scripts/module/c  -> lib/site_perl/module/d \
#                   data/e            -> share/data/f
#
#    $(call ADD_FILE_COPY_RULES,${EXECS},)           #  These go in Makefile!
#    $(call ADD_FILE_COPY_RULES,${FILES},)
#
#  Source locations are relative to the submakefile location, and destination
#  locations are relative to TARGET_DIR (e.g., 'build/'.  Destination
#  directories are created if needed.
#
#  If the second parameter is the "executable", then the copied file is made
#  executable.
#
#  ADD_FILE_COPY_RULE does the work of adding the rules, copying the first
#  parameter to the second parameter and setting +x if the third parameter is
#  "executable".
#
#  MAKE_FILE_COPY_LIST strips whitespace from around the 'file copy' operator
#  '->' in the user-supplied file-copy-list.  It works by first squashing
#  adjacent white space to a single space, then replacing adjacent whitespace
#  with nothing.
#
#  (The $\ at the end of some of these lines serve to eat up whitespace
#   before the continued line.)
#
define MAKE_FILE_COPY_LIST
  $(subst         $  ->$ ,->,$\
          $(subst $ -> $ ,->,$\
                  $(strip ${1})))
endef

define ADD_FILE_COPY_RULE
  doall: $${TARGET_DIR}/$2
  ifeq ($3,executable)
  $${TARGET_DIR}/$2: $1
		@mkdir -p $$(dir $${TARGET_DIR}/$2)
		cp -pf $1 $${TARGET_DIR}/$2
		chmod +x $${TARGET_DIR}/$2
  else
  $${TARGET_DIR}/$2: $1
		@mkdir -p $$(dir $${TARGET_DIR}/$2)
		cp -pf $1 $${TARGET_DIR}/$2
  endif
  doclean: doclean-$1
  .PHONY: doclean-$1
  doclean-$1:
		rm -f $${TARGET_DIR}/$2
endef

define ADD_FILE_COPY_RULES
  $(foreach R,$(call MAKE_FILE_COPY_LIST,$1),\
            $(eval $(call ADD_FILE_COPY_RULE,$(firstword $(subst ->, ,${R})),$\
                                             $(lastword  $(subst ->, ,${R})),$2)))
endef

#  Adds a pattern rule for building object files from source files with the
#  filename extension specified in the second argument. The first argument
#  must be the name of the base directory where the object files should
#  reside (such that the portion of the path after the base directory will
#  match the path to corresponding source files). The third argument must
#  contain the rules used to compile the source files into object code form.
#  Use with EVAL.
#
define ADD_OBJECT_RULE
  ${1}/%.o: ${2} ${VERSION_H}
		${3}
endef

#  Adds a new target to the Makefile.  Targets are executable files unless
#  they end with '.a'.  Use with EVAL.
#
define ADD_TARGET_RULE
  ifeq "$$(suffix ${1})" ".a"
    # Add a target for creating a static library.
    $${TARGET_DIR}/${1}: $${${1}_OBJS}
			@mkdir -p $$(dir $$@)
			$$(strip $${AR} $${ARFLAGS} $$@ $${${1}_OBJS})
			$${${1}_POSTMAKE}
  else
    # Add a target for linking an executable. First, attempt to select the
    # appropriate front-end to use for linking. This might not choose the
    # right one (e.g. if linking with a C++ static library, but all other
    # sources are C sources), so the user makefile is allowed to specify a
    # linker to be used for each target.
    ifeq "$$(strip $${${1}_LINKER})" ""
      # No linker was explicitly specified to be used for this target. If
      # there are any C++ sources for this target, use the C++ compiler.
      # For all other targets, default to using the C compiler.
      ifneq "$$(strip $$(filter $${CXX_SRC_EXTS},$${${1}_SOURCES}))" ""
        ${1}_LINKER = $${CXX}
      else
        ${1}_LINKER = $${CC}
      endif
    endif

    $${TARGET_DIR}/${1}: $${${1}_OBJS} $${${1}_PREREQS}
			@mkdir -p $$(dir $$@)
			$$(strip $${${1}_LINKER} -o $$@ $${LDFLAGS} $${${1}_LDFLAGS} $${${1}_OBJS} $${${1}_LDLIBS} $${LDLIBS})
			$${${1}_POSTMAKE}
  endif
endef

# COMPILE_C_CMDS - Commands for compiling C source code.
define COMPILE_C_CMDS
	@mkdir -p $(dir $@)
	$(strip ${CC} -o $@ -c -MD ${CFLAGS} ${SRC_CFLAGS} ${SRC_INCDIRS} ${SYS_INCDIRS} ${SRC_DEFS} $<)
	@cp ${@:%$(suffix $@)=%.d} ${@:%$(suffix $@)=%.P}; \
	 sed -e 's/#.*//' -e 's/^[^:]*: *//' -e 's/ *\\$$//' \
	     -e '/^$$/ d' -e 's/$$/ :/' < ${@:%$(suffix $@)=%.d} \
	     >> ${@:%$(suffix $@)=%.P}; \
	 rm -f ${@:%$(suffix $@)=%.d}
endef

# COMPILE_CXX_CMDS - Commands for compiling C++ source code.
define COMPILE_CXX_CMDS
	@mkdir -p $(dir $@)
	$(strip ${CXX} -o $@ -c -MD ${CXXFLAGS} ${SRC_CXXFLAGS} ${SRC_INCDIRS} ${SYS_INCDIRS} ${SRC_DEFS} $<)
	@cp ${@:%$(suffix $@)=%.d} ${@:%$(suffix $@)=%.P}; \
	 sed -e 's/#.*//' -e 's/^[^:]*: *//' -e 's/ *\\$$//' \
	     -e '/^$$/ d' -e 's/$$/ :/' < ${@:%$(suffix $@)=%.d} \
	     >> ${@:%$(suffix $@)=%.P}; \
	 rm -f ${@:%$(suffix $@)=%.d}
endef

# INCLUDE_SUBMAKEFILE - Parameterized "function" that includes a new
#   "submakefile" fragment into the overall Makefile. It also recursively
#   includes all submakefiles of the specified submakefile fragment.
#
#   USE WITH EVAL
#
define INCLUDE_SUBMAKEFILE
  # Initialize all variables that can be defined by a makefile fragment, then
  # include the specified makefile fragment.
  TARGET        :=
  TGT_LDFLAGS   :=
  TGT_LDLIBS    :=
  TGT_LINKER    :=
  TGT_PREREQS   :=

  SOURCES       :=
  SRC_CFLAGS    :=
  SRC_CXXFLAGS  :=
  SRC_DEFS      :=
  SRC_INCDIRS   :=

  SYS_INCDIRS   :=

  SUBMAKEFILES  :=

  # A directory stack is maintained so that the correct paths are used as we
  # recursively include all submakefiles. Get the makefile's directory and
  # push it onto the stack.
  DIR := $(call CANONICAL_PATH,$(dir ${1}))
  DIR_STACK := $$(call PUSH,$${DIR_STACK},$${DIR})

  include ${1}

  # Initialize internal local variables.
  OBJS :=

  # Determine which target this makefile's variables apply to. A stack is
  # used to keep track of which target is the "current" target as we
  # recursively include other submakefiles.
  ifneq "$$(strip $${TARGET})" ""
    # This makefile defined a new target. Target variables defined by this
    # makefile apply to this new target. Initialize the target's variables.

    ifeq "$$(suffix $${TARGET})" ".a"
      TGT := $$(addprefix lib/, $$(strip $${TARGET}))
    else
      TGT := $$(addprefix bin/, $$(strip $${TARGET}))
    endif
    ALL_TGTS += $${TGT}
    $${TGT}_DEPS      :=
    $${TGT}_LDFLAGS   := $${TGT_LDFLAGS}
    $${TGT}_LDLIBS    := $${TGT_LDLIBS}
    $${TGT}_LINKER    := $${TGT_LINKER}
    $${TGT}_OBJS      :=
    $${TGT}_PREREQS   := $$(addprefix $${TARGET_DIR}/lib/,$${TGT_PREREQS})
  else
    # The values defined by this makefile apply to the the "current" target
    # as determined by which target is at the top of the stack.
    TGT := $$(strip $$(call PEEK,$${TGT_STACK}))
    $${TGT}_LDFLAGS   += $${TGT_LDFLAGS}
    $${TGT}_LDLIBS    += $${TGT_LDLIBS}
    $${TGT}_PREREQS   += $${TGT_PREREQS}
  endif

  # Push the current target onto the target stack.
  TGT_STACK := $$(call PUSH,$${TGT_STACK},$${TGT})

  ifneq "$$(strip $${SOURCES})" ""
    # This makefile builds one or more objects from source. Validate the
    # specified sources against the supported source file types.
    BAD_SRCS := $$(strip $$(filter-out $${ALL_SRC_EXTS},$${SOURCES}))
    ifneq "$${BAD_SRCS}" ""
      $$(error Unsupported source file(s) found in ${1} [$${BAD_SRCS}])
    endif

    # Qualify and canonicalize paths.
    SOURCES     := $$(call QUALIFY_PATH,$${DIR},$${SOURCES})
    SOURCES     := $$(call CANONICAL_PATH,$${SOURCES})
    SRC_INCDIRS := $$(call QUALIFY_PATH,$${DIR},$${SRC_INCDIRS})
    SRC_INCDIRS := $$(call CANONICAL_PATH,$${SRC_INCDIRS})
    SYS_INCDIRS := $$(call QUALIFY_PATH,$${DIR},$${SYS_INCDIRS})
    SYS_INCDIRS := $$(call CANONICAL_PATH,$${SYS_INCDIRS})

    # Save the list of source files for this target.
    $${TGT}_SOURCES += $${SOURCES}

    # Convert the source file names to their corresponding object file
    # names.
    OBJS := $$(addprefix $${BUILD_DIR}/$$(call CANONICAL_PATH,$${TGT})/,\
              $$(addsuffix .o,$$(basename $${SOURCES})))

    # Add the objects to the current target's list of objects, and create
    # target-specific variables for the objects based on any source
    # variables that were defined.
    $${TGT}_OBJS += $${OBJS}
    $${TGT}_DEPS += $${OBJS:%.o=%.P}
    $${OBJS}: SRC_CFLAGS   := $${SRC_CFLAGS}
    $${OBJS}: SRC_CXXFLAGS := $${SRC_CXXFLAGS}
    $${OBJS}: SRC_DEFS     := $$(addprefix -D,$${SRC_DEFS})
    $${OBJS}: SRC_INCDIRS  := $$(addprefix -iquote,$${SRC_INCDIRS})
    $${OBJS}: SYS_INCDIRS  := $$(addprefix -isystem,$${SYS_INCDIRS})
  endif

  ifneq "$$(strip $${SUBMAKEFILES})" ""
    # This makefile has submakefiles. Recursively include them.
    $$(foreach MK,$${SUBMAKEFILES},\
      $$(eval $$(call INCLUDE_SUBMAKEFILE,\
                $$(call CANONICAL_PATH,\
                  $$(call QUALIFY_PATH,$${DIR},$${MK})))))
  endif

  # Reset the "current" target to it's previous value.
  TGT_STACK := $$(call POP,$${TGT_STACK})
  TGT := $$(call PEEK,$${TGT_STACK})

  # Reset the "current" directory to it's previous value.
  DIR_STACK := $$(call POP,$${DIR_STACK})
  DIR := $$(call PEEK,$${DIR_STACK})
endef


# MIN - Parameterized "function" that results in the minimum lexical value of
#   the two values given.
#define MIN
#$(firstword $(sort ${1} ${2}))
#endef

# PEEK - Parameterized "function" that results in the value at the top of the
#   specified colon-delimited stack.
define PEEK
$(lastword $(subst :, ,${1}))
endef

# POP - Parameterized "function" that pops the top value off of the specified
#   colon-delimited stack, and results in the new value of the stack. Note that
#   the popped value cannot be obtained using this function; use peek for that.
define POP
${1:%:$(lastword $(subst :, ,${1}))=%}
endef

# PUSH - Parameterized "function" that pushes a value onto the specified colon-
#   delimited stack, and results in the new value of the stack.
define PUSH
${2:%=${1}:%}
endef

# CANONICAL_PATH - Given one or more paths, converts the paths to the canonical
#   form. The canonical form is the path, relative to the project's top-level
#   directory (the directory from which "make" is run), and without
#   any "./" or "../" sequences. For paths that are not  located below the
#   top-level directory, the canonical form is the absolute path (i.e. from
#   the root of the filesystem) also without "./" or "../" sequences.
define CANONICAL_PATH
$(patsubst ${CURDIR}/%,%,$(abspath ${1}))
endef

# QUALIFY_PATH - Given a "root" directory and one or more paths, qualifies the
#   paths using the "root" directory (i.e. appends the root directory name to
#   the paths) except for paths that are absolute.
define QUALIFY_PATH
$(addprefix ${1}/,$(filter-out /%,${2})) $(filter /%,${2})
endef