# HG changeset patch
# User fubar
# Date 1721196513 0
# Node ID 264d79548d1914328299c303a8e9b512854c7ca9
# Parent ee773bbde3c3d498b56c79fa88baae8d3085b634
planemo upload for repository https://github.com/fubar2/microsatbed commit d952bc313f408735456747c3d33e09a3170c8f59-dirty
diff -r ee773bbde3c3 -r 264d79548d19 find_str.py
--- a/find_str.py Wed Jul 17 05:08:00 2024 +0000
+++ b/find_str.py Wed Jul 17 06:08:33 2024 +0000
@@ -27,12 +27,12 @@
ssrs = pytrf.STRFinder(
name,
seq,
- 2,
- 1,
- 2,
- 2,
- 2,
- 2,
+ args.monomin,
+ args.dimin,
+ args.trimin,
+ args.tetramin,
+ args.pentamin,
+ args.hexamin,
)
else:
ssrs = pytrf.STRFinder(
diff -r ee773bbde3c3 -r 264d79548d19 microsatbed.xml
--- a/microsatbed.xml Wed Jul 17 05:08:00 2024 +0000
+++ b/microsatbed.xml Wed Jul 17 06:08:33 2024 +0000
@@ -12,9 +12,9 @@
@@ -80,26 +85,17 @@
-
-
-
-
-
-
+
+
+
+
+
+
-
-
-
-
-
-
-
Comma separated values
-
-
-
-
-
-
+
+
+
+
+
+
@@ -135,12 +131,13 @@
-
-
-
-
-
+
+
+
+
+
+
@@ -151,8 +148,13 @@
-
+
+
+
+
+
+
@@ -163,13 +165,13 @@
-
-
-
-
-
-
+
+
+
+
+
+
diff -r ee773bbde3c3 -r 264d79548d19 test-data/bed_sample
--- a/test-data/bed_sample Wed Jul 17 05:08:00 2024 +0000
+++ b/test-data/bed_sample Wed Jul 17 06:08:33 2024 +0000
@@ -1,437 +1,823 @@
-hpat1 46 52 TAT_2 6
+hpat1 0 4 AA_2 4
+hpat1 8 12 GA_2 4
+hpat1 13 17 AC_2 4
+hpat1 18 22 AA_2 4
+hpat1 41 45 AA_2 4
+hpat1 45 49 AT_2 4
+hpat1 91 95 TT_2 4
hpat1 99 105 GAG_2 6
-hpat1 111 115 AT_2 4
+hpat1 110 114 TA_2 4
hpat1 120 126 ATG_2 6
+hpat1 129 133 AA_2 4
+hpat1 140 144 TT_2 4
hpat1 147 151 TA_2 4
+hpat1 169 173 AT_2 4
+hpat1 213 217 AA_2 4
hpat1 223 227 AT_2 4
+hpat1 234 238 TT_2 4
hpat1 247 253 TAG_2 6
+hpat1 278 282 AA_2 4
hpat1 283 289 CAT_2 6
+hpat1 290 294 TT_2 4
+hpat1 300 306 GTT_2 6
hpat1 307 311 CT_2 4
+hpat1 311 315 TT_2 4
hpat1 332 336 TA_2 4
hpat1 341 349 AG_4 8
hpat1 350 356 ATA_2 6
+hpat1 368 376 TTTC_2 8
hpat1 381 387 TA_3 6
-hpat1 421 427 TGA_2 6
+hpat1 420 426 ATG_2 6
hpat1 470 474 AG_2 4
hpat1 474 480 ACA_2 6
+hpat1 480 484 GG_2 4
+hpat1 505 509 TT_2 4
hpat1 509 529 ATTT_5 20
hpat1 530 534 GA_2 4
+hpat1 539 543 TT_2 4
hpat1 544 548 CT_2 4
+hpat1 548 552 TT_2 4
+hpat1 596 600 CT_2 4
+hpat1 601 607 CCT_2 6
+hpat1 620 624 TC_2 4
hpat1 661 665 GC_2 4
hpat1 665 671 CAC_2 6
-hpat1 696 700 AG_2 4
+hpat1 681 685 TT_2 4
+hpat1 688 692 TT_2 4
+hpat1 692 698 TAG_2 6
+hpat1 702 706 GG_2 4
+hpat1 708 712 TC_2 4
hpat1 729 733 TC_2 4
hpat1 748 752 AT_2 4
hpat1 752 760 CTGC_2 8
-hpat1 790 794 TG_2 4
-hpat1 801 805 GC_2 4
-hpat1 839 843 GA_2 4
+hpat1 789 793 GT_2 4
+hpat1 800 804 CG_2 4
+hpat1 838 842 AG_2 4
+hpat1 855 861 AA_3 6
+hpat1 861 867 ATA_2 6
hpat1 879 885 TGG_2 6
hpat1 887 891 CA_2 4
hpat1 893 897 TA_2 4
hpat1 932 938 AGG_2 6
hpat1 939 945 CAG_2 6
+hpat1 975 979 CC_2 4
hpat1 980 984 TC_2 4
+hpat1 988 992 AA_2 4
+hpat1 996 1000 AA_2 4
hpat1 1011 1017 GTG_2 6
hpat1 1036 1042 GCT_2 6
hpat1 1056 1060 AG_2 4
hpat1 1098 1102 GA_2 4
hpat1 1131 1135 AG_2 4
hpat1 1145 1149 TC_2 4
+hpat1 1149 1157 AA_4 8
hpat1 1157 1165 TAAA_2 8
+hpat1 1200 1208 AATA_2 8
hpat1 1210 1218 TAAA_2 8
hpat1 1225 1229 TC_2 4
+hpat1 1243 1247 AA_2 4
hpat1 1253 1261 CTAA_2 8
+hpat1 1279 1283 TT_2 4
hpat1 1293 1299 GCA_2 6
hpat1 1312 1318 GT_3 6
hpat1 1320 1324 AC_2 4
-hpat1 1341 1347 GAA_2 6
+hpat1 1339 1345 AAG_2 6
+hpat1 1397 1401 CC_2 4
hpat1 1402 1408 ATG_2 6
hpat1 1422 1426 TG_2 4
+hpat1 1456 1460 TT_2 4
hpat1 1476 1480 AT_2 4
+hpat1 1480 1488 TTTC_2 8
+hpat1 1494 1500 TTC_2 6
hpat1 1501 1509 GTTT_2 8
hpat1 1526 1532 GAT_2 6
-hpat1 1539 1543 CT_2 4
+hpat1 1538 1542 TC_2 4
+hpat1 1544 1548 AA_2 4
+hpat1 1554 1558 AA_2 4
+hpat1 1564 1568 TC_2 4
+hpat1 1572 1576 AC_2 4
hpat1 1587 1591 AG_2 4
hpat1 1602 1606 TA_2 4
hpat1 1618 1624 AT_3 6
hpat1 1642 1646 AT_2 4
+hpat1 1648 1652 TT_2 4
+hpat1 1664 1670 AA_3 6
+hpat1 1673 1677 CC_2 4
+hpat1 1681 1687 TGG_2 6
+hpat1 1708 1712 GA_2 4
hpat1 1717 1721 AG_2 4
+hpat1 1727 1731 AA_2 4
hpat1 1733 1739 AGG_2 6
-hpat1 1763 1767 CA_2 4
+hpat1 1743 1747 AA_2 4
+hpat1 1749 1757 TCAA_2 8
+hpat1 1762 1766 AC_2 4
hpat1 1780 1784 CA_2 4
hpat1 1793 1797 TC_2 4
+hpat1 1799 1803 GG_2 4
+hpat1 1805 1809 TT_2 4
+hpat1 1821 1825 AA_2 4
hpat1 1829 1833 TC_2 4
hpat1 1836 1842 TG_3 6
hpat1 1855 1861 CAG_2 6
hpat1 1870 1876 GTG_2 6
-hpat1 1901 1907 CAG_2 6
+hpat1 1900 1906 GCA_2 6
hpat1 1907 1915 AGGC_2 8
+hpat1 1945 1949 AA_2 4
+hpat1 1949 1955 CC_3 6
+hpat1 1962 1966 CC_2 4
+hpat1 1967 1971 CC_2 4
+hpat1 1973 1977 CC_2 4
+hpat1 1986 1990 AA_2 4
+hpat1 1994 1998 AA_2 4
hpat1 1998 2004 CAG_2 6
hpat1 2008 2014 TGG_2 6
+hpat1 2017 2021 GC_2 4
hpat1 2039 2045 AGG_2 6
+hpat1 2054 2058 GA_2 4
hpat1 2071 2077 AGG_2 6
hpat1 2124 2128 AG_2 4
+hpat1 2142 2150 AA_4 8
hpat1 2150 2162 CAAAAA_2 12
hpat1 2162 2166 CA_2 4
+hpat1 2172 2176 AG_2 4
+hpat1 2179 2183 CC_2 4
+hpat1 2205 2209 AG_2 4
+hpat1 2212 2216 CC_2 4
+hpat1 2221 2227 AA_3 6
+hpat1 2236 2240 TT_2 4
+hpat1 2240 2244 TC_2 4
+hpat1 2256 2260 AC_2 4
hpat1 2261 2267 AGG_2 6
hpat1 2267 2271 GT_2 4
+hpat1 2276 2280 TT_2 4
+hpat1 2305 2309 CC_2 4
hpat1 2319 2323 AT_2 4
-hpat1 2354 2358 AT_2 4
+hpat1 2353 2357 TA_2 4
+hpat1 2361 2365 AA_2 4
hpat1 2377 2381 AT_2 4
-hpat1 2438 2448 GAGCA_2 10
-hpat1 2456 2460 AG_2 4
+hpat1 2403 2407 TT_2 4
+hpat1 2407 2411 GG_2 4
+hpat1 2437 2441 AG_2 4
+hpat1 2442 2446 AG_2 4
+hpat1 2455 2459 GA_2 4
hpat1 2463 2467 GA_2 4
+hpat1 2468 2472 GT_2 4
hpat1 2502 2506 GA_2 4
-hpat1 2513 2517 CA_2 4
+hpat1 2509 2515 GCA_2 6
+hpat1 2537 2541 CT_2 4
+hpat1 2558 2562 TC_2 4
hpat1 2566 2570 AG_2 4
-hpat1 2651 2655 TA_2 4
+hpat1 2650 2656 AT_3 6
+hpat1 2660 2666 GTT_2 6
hpat1 2678 2684 GT_3 6
-hpat1 2695 2701 GCA_2 6
+hpat1 2690 2696 TTG_2 6
+hpat1 2696 2702 CAG_2 6
+hpat1 2703 2707 CA_2 4
+hpat1 2733 2737 AA_2 4
+hpat1 2737 2743 CC_3 6
+hpat1 2748 2758 GGGCT_2 10
hpat1 2797 2801 GA_2 4
hpat1 2829 2833 GA_2 4
+hpat1 2833 2843 CCAGC_2 10
hpat1 2863 2867 TA_2 4
+hpat1 2868 2874 AA_3 6
+hpat1 2877 2881 AA_2 4
hpat1 2893 2899 TGG_2 6
hpat1 2899 2903 CA_2 4
hpat1 2912 2916 TC_2 4
hpat1 2924 2930 AGG_2 6
hpat1 2932 2936 GA_2 4
+hpat1 2939 2943 GA_2 4
+hpat1 2957 2963 GG_3 6
hpat1 2964 2968 AG_2 4
hpat1 2981 2985 GA_2 4
+hpat1 2987 2993 CCA_2 6
hpat1 3014 3018 AG_2 4
hpat1 3028 3032 TC_2 4
+hpat1 3033 3037 AA_2 4
hpat1 3037 3052 CAAAA_3 15
+hpat1 3055 3059 CC_2 4
hpat1 3086 3090 CT_2 4
+hpat1 3099 3103 CC_2 4
hpat1 3124 3128 TG_2 4
hpat1 3143 3151 GAAG_2 8
+hpat1 3153 3159 CCT_2 6
hpat1 3165 3169 AG_2 4
+hpat1 3179 3183 GA_2 4
hpat1 3198 3204 ACT_2 6
+hpat1 3211 3215 CC_2 4
hpat1 3215 3219 TC_2 4
hpat1 3229 3233 AT_2 4
+hpat1 3235 3247 TT_6 12
hpat1 3260 3264 CT_2 4
hpat1 3265 3269 TC_2 4
+hpat1 3284 3288 GG_2 4
hpat1 3288 3292 CA_2 4
hpat1 3293 3297 TC_2 4
+hpat1 3310 3314 CT_2 4
+hpat1 3318 3322 CC_2 4
+hpat1 3334 3338 TC_2 4
hpat1 3347 3351 TC_2 4
hpat1 3373 3377 GT_2 4
+hpat1 3392 3396 TT_2 4
+hpat1 3418 3422 TT_2 4
+hpat1 3460 3466 AGT_2 6
hpat1 3473 3477 TC_2 4
+hpat1 3479 3483 CC_2 4
+hpat1 3550 3554 TT_2 4
hpat1 3572 3582 GTCTG_2 10
hpat1 3583 3587 CT_2 4
+hpat1 3588 3592 CC_2 4
hpat1 3593 3597 CT_2 4
+hpat1 3600 3604 TC_2 4
+hpat1 3627 3631 TT_2 4
hpat1 3635 3639 AG_2 4
hpat1 3639 3643 GA_2 4
hpat1 3643 3649 GT_3 6
+hpat1 3650 3654 CC_2 4
+hpat1 3697 3703 GCT_2 6
+hpat1 3703 3707 CC_2 4
hpat1 3714 3720 GAA_2 6
+hpat1 3720 3726 AA_3 6
hpat1 3729 3735 TC_3 6
hpat1 3735 3739 TG_2 4
+hpat1 3762 3766 CC_2 4
hpat1 3773 3777 TG_2 4
hpat1 3777 3781 AG_2 4
+hpat1 3795 3801 CCA_2 6
+hpat1 3814 3818 GG_2 4
hpat1 3826 3830 GT_2 4
-hpat1 3857 3863 CAG_2 6
+hpat1 3838 3842 CC_2 4
+hpat1 3845 3853 AA_4 8
+hpat1 3856 3862 GCA_2 6
hpat1 3876 3880 GC_2 4
hpat1 3881 3885 CA_2 4
hpat1 3905 3915 GAGGG_2 10
+hpat1 3938 3942 GG_2 4
hpat1 3944 3950 AG_3 6
hpat1 3950 3954 GC_2 4
+hpat1 3962 3968 GGC_2 6
+hpat1 3971 3975 CC_2 4
hpat1 3994 3998 CT_2 4
+hpat1 4026 4030 TG_2 4
+hpat1 4034 4038 GG_2 4
+hpat1 4045 4049 AA_2 4
+hpat1 4050 4054 CA_2 4
+hpat1 4057 4061 CC_2 4
+hpat1 4071 4075 CC_2 4
+hpat1 4081 4085 GG_2 4
hpat1 4086 4090 AG_2 4
+hpat1 4093 4099 GGA_2 6
hpat1 4108 4112 AG_2 4
hpat1 4112 4116 GA_2 4
-hpat1 4125 4131 AGG_2 6
+hpat1 4116 4128 GGCAGG_2 12
hpat1 4149 4155 AGG_2 6
-hpat1 4188 4196 TCCT_2 8
+hpat1 4162 4166 TC_2 4
+hpat1 4186 4190 TC_2 4
+hpat1 4198 4202 CC_2 4
+hpat1 4216 4220 GG_2 4
hpat1 4227 4231 GA_2 4
-hpat1 4285 4289 TG_2 4
-hpat1 4315 4325 GTTTT_2 10
+hpat1 4238 4242 TC_2 4
+hpat1 4284 4288 GT_2 4
+hpat1 4291 4295 CC_2 4
+hpat1 4310 4325 GTTTT_3 15
+hpat1 4327 4331 TT_2 4
hpat1 4332 4336 GA_2 4
hpat1 4337 4341 AG_2 4
hpat1 4380 4384 TC_2 4
-hpat1 4387 4391 AC_2 4
+hpat1 4386 4390 CA_2 4
hpat1 4399 4403 GC_2 4
-hpat1 4499 4503 AG_2 4
+hpat1 4421 4425 TC_2 4
+hpat1 4435 4439 CT_2 4
+hpat1 4465 4471 CCA_2 6
+hpat1 4482 4488 TT_3 6
+hpat1 4491 4495 TT_2 4
+hpat1 4495 4501 TAG_2 6
hpat1 4590 4594 AT_2 4
hpat1 4601 4605 TG_2 4
+hpat1 4611 4615 CA_2 4
+hpat1 4623 4627 TT_2 4
hpat1 4627 4631 GT_2 4
-hpat1 4633 4637 AG_2 4
+hpat1 4632 4636 GA_2 4
+hpat1 4657 4661 AA_2 4
+hpat1 4666 4670 CA_2 4
hpat1 4671 4675 CT_2 4
-hpat1 4681 4687 CAG_2 6
+hpat1 4678 4682 TC_2 4
+hpat1 4698 4704 AA_3 6
hpat1 4712 4716 CT_2 4
hpat1 4722 4726 AG_2 4
hpat1 4727 4731 TG_2 4
+hpat1 4733 4739 AGC_2 6
+hpat1 4746 4750 GG_2 4
hpat1 4763 4767 CT_2 4
hpat1 4783 4787 CT_2 4
-hpat1 4794 4800 ATC_2 6
+hpat1 4793 4799 CAT_2 6
+hpat1 4799 4803 CC_2 4
hpat1 4804 4812 AGGC_2 8
hpat1 4831 4835 AG_2 4
+hpat1 4839 4843 GG_2 4
+hpat1 4845 4849 GG_2 4
hpat1 4851 4855 TG_2 4
hpat1 4860 4864 TG_2 4
hpat1 4874 4878 GA_2 4
+hpat1 4883 4887 CA_2 4
hpat1 4906 4910 GC_2 4
hpat1 4914 4918 TC_2 4
hpat1 4926 4932 TCC_2 6
hpat1 4938 4942 AG_2 4
+hpat1 4946 4950 GG_2 4
+hpat1 4954 4958 GA_2 4
hpat1 4968 4974 GCA_2 6
+hpat1 4978 4982 AA_2 4
hpat1 4985 4991 TAT_2 6
+hpat1 4995 5003 TCCC_2 8
hpat1 5027 5031 AC_2 4
hpat1 5033 5037 AT_2 4
-hpat1 5054 5058 CT_2 4
+hpat1 5053 5057 TC_2 4
hpat1 5104 5108 CA_2 4
hpat1 5113 5117 AT_2 4
-hpat1 5138 5142 GA_2 4
-hpat1 5174 5178 TG_2 4
-hpat1 5200 5204 AG_2 4
+hpat1 5137 5141 AG_2 4
+hpat1 5155 5159 GG_2 4
+hpat1 5160 5164 GG_2 4
+hpat1 5173 5177 GT_2 4
+hpat1 5188 5192 TG_2 4
+hpat1 5199 5203 GA_2 4
+hpat1 5209 5213 GG_2 4
hpat1 5214 5220 AGC_2 6
+hpat1 5253 5257 GA_2 4
+hpat1 5265 5269 AA_2 4
+hpat1 5280 5284 CA_2 4
hpat1 5301 5305 AG_2 4
+hpat1 5357 5363 GAA_2 6
+hpat1 5375 5379 GG_2 4
hpat1 5387 5391 AC_2 4
+hpat1 5395 5399 GG_2 4
hpat1 5412 5416 AG_2 4
-hpat1 5444 5448 TG_2 4
+hpat1 5443 5447 GT_2 4
+hpat1 5450 5454 CC_2 4
+hpat1 5459 5465 ATG_2 6
+hpat1 5470 5476 TT_3 6
+hpat1 5477 5481 TT_2 4
+hpat1 5483 5487 TT_2 4
+hpat1 5488 5492 GA_2 4
hpat1 5502 5506 CT_2 4
hpat1 5509 5515 CA_3 6
hpat1 5532 5536 AG_2 4
hpat1 5555 5559 CT_2 4
-hpat1 5562 5566 TG_2 4
+hpat1 5561 5565 GT_2 4
+hpat1 5580 5584 AA_2 4
+hpat1 5585 5589 CC_2 4
+hpat1 5591 5595 CC_2 4
hpat1 5601 5607 CAC_2 6
+hpat1 5610 5614 CC_2 4
hpat1 5618 5624 ACT_2 6
+hpat1 5645 5649 GG_2 4
+hpat1 5680 5686 CAA_2 6
+hpat1 5697 5701 CC_2 4
+hpat1 5709 5713 GG_2 4
+hpat1 5718 5722 GG_2 4
+hpat1 5736 5740 CC_2 4
hpat1 5749 5753 CT_2 4
+hpat1 5760 5764 AC_2 4
+hpat1 5779 5783 CA_2 4
+hpat1 5785 5789 GA_2 4
hpat1 5797 5801 GC_2 4
+hpat1 5812 5816 GG_2 4
hpat1 5826 5830 AG_2 4
+hpat1 5853 5857 CC_2 4
hpat1 5876 5880 AG_2 4
+hpat1 5885 5889 TT_2 4
hpat1 5894 5898 TG_2 4
hpat1 5901 5905 AG_2 4
-hpat1 5907 5913 CAG_2 6
-hpat1 5913 5919 CTG_2 6
+hpat1 5906 5912 GCA_2 6
+hpat1 5912 5918 GCT_2 6
+hpat1 5947 5951 TC_2 4
+hpat1 5984 5988 CA_2 4
hpat1 6013 6017 AG_2 4
hpat1 6021 6025 AG_2 4
hpat1 6039 6043 TC_2 4
+hpat1 6054 6058 TG_2 4
+hpat1 6070 6074 GA_2 4
hpat1 6087 6091 GA_2 4
hpat1 6106 6112 AGC_2 6
+hpat1 6123 6127 CC_2 4
hpat1 6129 6137 TGGA_2 8
hpat1 6138 6142 GC_2 4
hpat1 6148 6156 TGGA_2 8
hpat1 6164 6172 CAGA_2 8
-hpat1 6201 6205 AG_2 4
+hpat1 6200 6204 GA_2 4
hpat1 6207 6211 CA_2 4
hpat1 6219 6223 GT_2 4
+hpat1 6273 6277 CC_2 4
hpat1 6280 6286 ACC_2 6
-hpat1 6313 6319 AGC_2 6
+hpat1 6312 6318 CAG_2 6
+hpat1 6318 6322 CA_2 4
+hpat1 6345 6349 GG_2 4
hpat1 6355 6359 AG_2 4
-hpat1 6397 6401 TC_2 4
+hpat1 6361 6365 CC_2 4
+hpat1 6390 6394 CC_2 4
+hpat1 6396 6400 CT_2 4
+hpat1 6407 6413 CTT_2 6
+hpat1 6429 6433 CC_2 4
hpat1 6434 6438 AC_2 4
hpat1 6456 6460 TG_2 4
+hpat1 6498 6506 AA_4 8
hpat1 6517 6521 AT_2 4
hpat1 6555 6559 AT_2 4
+hpat1 6559 6565 AAC_2 6
hpat1 6572 6576 AC_2 4
-hpat1 6586 6592 TA_3 6
+hpat1 6585 6593 AT_4 8
hpat1 6611 6615 AC_2 4
+hpat1 6621 6625 AT_2 4
+hpat1 6626 6630 AA_2 4
+hpat1 6635 6639 TT_2 4
+hpat1 6640 6644 AA_2 4
hpat1 6646 6650 TA_2 4
hpat1 6677 6685 TATT_2 8
-hpat1 6696 6702 TCA_2 6
+hpat1 6686 6690 AA_2 4
+hpat1 6695 6701 ATC_2 6
+hpat1 6718 6722 AT_2 4
hpat1 6732 6736 CA_2 4
+hpat1 6756 6762 TAA_2 6
hpat1 6765 6771 AGC_2 6
hpat1 6771 6777 CAG_2 6
hpat1 6783 6789 AC_3 6
-hpat1 6891 6899 CTAA_2 8
+hpat1 6792 6796 AA_2 4
+hpat1 6799 6803 AA_2 4
+hpat1 6806 6810 AG_2 4
+hpat1 6833 6837 TT_2 4
+hpat1 6880 6884 TT_2 4
+hpat1 6889 6897 AACT_2 8
+hpat1 6902 6906 AT_2 4
hpat1 6906 6910 GA_2 4
hpat1 6923 6927 TA_2 4
+hpat1 6976 6980 AA_2 4
hpat1 7000 7004 TG_2 4
hpat1 7012 7018 GTA_2 6
hpat1 7018 7022 AC_2 4
+hpat1 7036 7040 CC_2 4
hpat1 7044 7048 AG_2 4
hpat1 7050 7054 TG_2 4
+hpat1 7061 7067 TCA_2 6
hpat1 7069 7073 CA_2 4
hpat1 7075 7079 GA_2 4
hpat1 7083 7089 AGA_2 6
+hpat1 7095 7099 AA_2 4
hpat1 7115 7119 GA_2 4
hpat1 7126 7130 AG_2 4
+hpat1 7143 7147 TT_2 4
+hpat1 7152 7156 CC_2 4
hpat1 7177 7183 TGG_2 6
hpat1 7184 7188 TG_2 4
hpat1 7206 7210 TC_2 4
-hpat1 7228 7234 TCA_2 6
+hpat1 7219 7223 GG_2 4
+hpat1 7223 7229 AAT_2 6
+hpat1 7229 7235 CAT_2 6
hpat1 7238 7250 GAAAAA_2 12
+hpat1 7289 7293 CT_2 4
+hpat1 7312 7316 AA_2 4
+hpat1 7340 7346 TTA_2 6
+hpat1 7349 7355 ATT_2 6
+hpat1 7379 7385 TT_3 6
+hpat1 7409 7413 TT_2 4
hpat1 7417 7421 TG_2 4
-hpat1 7484 7490 TCA_2 6
+hpat1 7437 7441 TT_2 4
+hpat1 7443 7447 CT_2 4
+hpat1 7462 7466 TT_2 4
+hpat1 7483 7489 ATC_2 6
hpat1 7497 7501 TC_2 4
-hpat1 7506 7512 CTC_2 6
+hpat1 7505 7509 TC_2 4
+hpat1 7527 7533 TGC_2 6
+hpat1 7558 7562 TT_2 4
hpat1 7562 7566 GA_2 4
+hpat1 7566 7570 AA_2 4
hpat1 7586 7592 GCC_2 6
-hpat1 7606 7610 TA_2 4
-hpat1 7610 7616 GAA_2 6
+hpat1 7598 7602 TA_2 4
+hpat1 7605 7609 AT_2 4
+hpat1 7609 7615 AGA_2 6
hpat1 7621 7631 ATAAA_2 10
+hpat1 7642 7648 AA_3 6
+hpat1 7663 7667 AA_2 4
hpat1 7671 7675 CG_2 4
+hpat1 7712 7716 TT_2 4
+hpat1 7725 7729 AA_2 4
hpat1 7748 7752 AG_2 4
hpat1 7763 7769 TGG_2 6
hpat1 7803 7811 AGGC_2 8
hpat1 7834 7838 GA_2 4
hpat1 7852 7856 AG_2 4
-hpat1 7864 7870 TC_3 6
+hpat1 7863 7871 CT_4 8
+hpat1 7874 7878 AA_2 4
+hpat1 7882 7886 AA_2 4
hpat1 7913 7917 TG_2 4
hpat1 7930 7934 GA_2 4
hpat1 7970 7974 GA_2 4
+hpat1 7997 8001 CC_2 4
hpat1 8002 8006 TC_2 4
+hpat1 8010 8014 AA_2 4
hpat1 8016 8022 ACA_2 6
-hpat1 8031 8035 TG_2 4
+hpat1 8030 8034 GT_2 4
hpat1 8039 8043 CA_2 4
-hpat1 8110 8116 GTG_2 6
+hpat1 8079 8083 GA_2 4
+hpat1 8096 8100 AA_2 4
+hpat1 8109 8113 TG_2 4
hpat1 8120 8124 GA_2 4
+hpat1 8125 8129 TG_2 4
+hpat1 8150 8154 AA_2 4
hpat1 8168 8172 TC_2 4
+hpat1 8172 8184 AA_6 12
+hpat1 8186 8192 AA_3 6
hpat1 8223 8227 GA_2 4
hpat1 8256 8260 AG_2 4
hpat1 8270 8274 TC_2 4
hpat1 8302 8314 GA_6 12
-hpat1 8316 8324 GAAA_2 8
+hpat1 8314 8326 AAGA_3 12
hpat1 8333 8339 ATT_2 6
hpat1 8377 8381 TG_2 4
hpat1 8381 8385 TA_2 4
hpat1 8395 8399 GA_2 4
-hpat1 8406 8416 GCACA_2 10
-hpat1 8416 8422 CA_3 6
+hpat1 8405 8415 AGCAC_2 10
+hpat1 8415 8423 AC_4 8
+hpat1 8424 8428 TC_2 4
hpat1 8444 8448 GT_2 4
-hpat1 8485 8489 CT_2 4
+hpat1 8480 8488 ACTC_2 8
hpat1 8508 8512 TC_2 4
hpat1 8523 8527 AG_2 4
hpat1 8541 8545 CA_2 4
+hpat1 8567 8571 AC_2 4
hpat1 8583 8591 AGGC_2 8
hpat1 8614 8618 GA_2 4
hpat1 8646 8650 TC_2 4
+hpat1 8654 8658 AA_2 4
+hpat1 8662 8668 AA_3 6
hpat1 8679 8685 TGG_2 6
hpat1 8685 8689 CG_2 4
+hpat1 8725 8729 GA_2 4
+hpat1 8743 8755 GGAGGT_2 12
hpat1 8766 8770 GA_2 4
+hpat1 8792 8796 GG_2 4
hpat1 8808 8812 CT_2 4
+hpat1 8815 8825 AA_5 10
hpat1 8827 8845 AGAAAA_3 18
hpat1 8852 8856 AG_2 4
hpat1 8881 8885 TC_2 4
hpat1 8890 8894 GT_2 4
-hpat1 8916 8922 GCT_2 6
+hpat1 8915 8921 TGC_2 6
hpat1 8923 8927 AC_2 4
hpat1 8927 8933 ATC_2 6
hpat1 8933 8937 TA_2 4
+hpat1 8945 8949 AA_2 4
+hpat1 8954 8958 TT_2 4
+hpat1 8966 8974 TT_4 8
+hpat1 8975 8979 TT_2 4
hpat1 8979 8983 GA_2 4
hpat1 8984 8988 AG_2 4
+hpat1 8988 8992 TT_2 4
hpat1 9025 9029 TC_2 4
hpat1 9041 9045 TC_2 4
-hpat1 9068 9076 TCCT_2 8
+hpat1 9047 9051 CC_2 4
+hpat1 9066 9070 TC_2 4
+hpat1 9079 9085 CCT_2 6
hpat1 9108 9117 CAC_3 9
+hpat1 9127 9131 TT_2 4
+hpat1 9134 9138 TT_2 4
hpat1 9143 9147 GA_2 4
+hpat1 9154 9158 TC_2 4
hpat1 9159 9163 AT_2 4
hpat1 9175 9179 TC_2 4
-hpat1 9238 9242 TG_2 4
+hpat1 9237 9241 GT_2 4
+hpat1 9244 9250 CCA_2 6
+hpat1 9271 9275 TT_2 4
+hpat1 9275 9279 AA_2 4
hpat1 9304 9308 TA_2 4
hpat1 9353 9359 AGT_2 6
hpat1 9361 9365 GA_2 4
hpat1 9380 9386 TGT_2 6
+hpat1 9388 9392 CC_2 4
hpat1 9393 9397 TC_2 4
-hpat1 9406 9410 TA_2 4
+hpat1 9401 9405 AA_2 4
+hpat1 9405 9411 AT_3 6
+hpat1 9414 9418 AA_2 4
hpat1 9430 9439 TGG_3 9
+hpat1 9457 9461 TC_2 4
hpat1 9461 9467 AGG_2 6
+hpat1 9476 9480 GA_2 4
+hpat1 9494 9506 GGAGGT_2 12
+hpat1 9517 9521 GA_2 4
hpat1 9534 9538 CT_2 4
hpat1 9565 9569 TC_2 4
-hpat1 9574 9599 CAAAA_5 25
-hpat1 9648 9652 CA_2 4
+hpat1 9569 9573 AA_2 4
+hpat1 9573 9598 ACAAA_5 25
+hpat1 9606 9614 AA_4 8
+hpat1 9625 9629 AA_2 4
+hpat1 9631 9635 AA_2 4
+hpat1 9637 9641 AA_2 4
+hpat1 9643 9647 AA_2 4
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hpat1 9652 9656 AC_2 4
hpat1 9660 9666 GTA_2 6
hpat1 9666 9670 CA_2 4
+hpat1 9674 9678 AA_2 4
hpat1 9685 9689 TG_2 4
-hpat1 9694 9698 CA_2 4
-hpat1 9762 9768 CTT_2 6
+hpat1 9693 9697 AC_2 4
+hpat1 9707 9711 AA_2 4
+hpat1 9712 9716 AA_2 4
+hpat1 9741 9745 TT_2 4
+hpat1 9760 9766 TTC_2 6
hpat1 9769 9773 CA_2 4
hpat1 9775 9783 TAAA_2 8
hpat1 9790 9794 AG_2 4
hpat1 9813 9817 GT_2 4
hpat1 9839 9843 GA_2 4
-hpat1 9852 9858 GT_3 6
-hpat1 9883 9887 TC_2 4
-hpat1 9917 9921 TA_2 4
+hpat1 9851 9857 TG_3 6
+hpat1 9882 9886 CT_2 4
+hpat1 9916 9920 AT_2 4
+hpat1 9934 9940 GCA_2 6
hpat1 9952 9960 TACA_2 8
+hpat1 9972 9978 TCA_2 6
+hpat1 10000 10004 AA_2 4
hpat1 10024 10028 AC_2 4
hpat1 10030 10034 GC_2 4
+hpat1 10040 10046 TTG_2 6
hpat1 10054 10058 CT_2 4
hpat1 10058 10064 TCT_2 6
+hpat1 10084 10090 ATT_2 6
+hpat1 10097 10101 TT_2 4
+hpat1 10115 10119 AA_2 4
hpat1 10162 10168 ACA_2 6
+hpat1 10181 10185 GG_2 4
hpat1 10200 10204 AG_2 4
hpat1 10222 10228 CTT_2 6
+hpat1 10236 10240 CT_2 4
hpat1 10248 10258 TGAAA_2 10
+hpat1 10266 10270 GG_2 4
+hpat1 10287 10291 GG_2 4
hpat1 10303 10307 CA_2 4
+hpat1 10309 10313 AA_2 4
+hpat1 10322 10328 AA_3 6
hpat1 10369 10373 TG_2 4
+hpat1 10398 10404 GGT_2 6
hpat1 10414 10418 AT_2 4
+hpat1 10444 10448 AA_2 4
hpat1 10448 10454 GA_3 6
+hpat1 10460 10464 GA_2 4
+hpat1 10466 10472 GCA_2 6
+hpat1 10476 10480 CC_2 4
+hpat1 10486 10490 AA_2 4
+hpat1 10497 10501 TT_2 4
hpat1 10501 10505 GA_2 4
-hpat1 10511 10515 AT_2 4
+hpat1 10510 10514 TA_2 4
+hpat1 10515 10521 TTC_2 6
+hpat1 10525 10529 AA_2 4
hpat1 10557 10561 GA_2 4
+hpat1 10565 10573 AATT_2 8
hpat1 10585 10589 AG_2 4
hpat1 10590 10594 CA_2 4
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hpat1 10628 10632 AT_2 4
+hpat1 10640 10644 AC_2 4
+hpat1 10645 10649 AA_2 4
+hpat1 10672 10676 AA_2 4
+hpat1 10679 10683 AT_2 4
+hpat1 10685 10691 AA_3 6
+hpat1 10703 10707 AC_2 4
+hpat1 10708 10712 GG_2 4
hpat1 10717 10723 AGT_2 6
hpat1 10732 10736 TC_2 4
+hpat1 10743 10753 GGTTT_2 10
hpat1 10767 10773 TGG_2 6
hpat1 10776 10780 AG_2 4
+hpat1 10782 10792 TTCAT_2 10
hpat1 10795 10799 AG_2 4
-hpat1 10806 10810 GA_2 4
+hpat1 10799 10807 AAAG_2 8
+hpat1 10807 10811 AG_2 4
+hpat1 10856 10864 TTTG_2 8
hpat1 10879 10885 AGA_2 6
hpat1 10899 10903 CA_2 4
-hpat1 10931 10935 CT_2 4
-hpat1 10953 10959 CTG_2 6
-hpat1 10975 10979 GA_2 4
-hpat1 10992 10998 AGG_2 6
+hpat1 10915 10919 AA_2 4
+hpat1 10930 10934 TC_2 4
+hpat1 10935 10941 AAG_2 6
+hpat1 10948 10954 TTC_2 6
+hpat1 10960 10964 AA_2 4
+hpat1 10970 10976 TTG_2 6
+hpat1 10978 10984 AA_3 6
+hpat1 10990 10996 GGA_2 6
+hpat1 11005 11015 TGAAG_2 10
+hpat1 11023 11027 TT_2 4
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hpat1 11048 11052 CT_2 4
hpat1 11055 11059 GT_2 4
+hpat1 11067 11073 ATT_2 6
hpat1 11077 11081 CA_2 4
-hpat1 11115 11119 GA_2 4
-hpat1 11144 11148 CA_2 4
+hpat1 11086 11090 CT_2 4
+hpat1 11114 11118 AG_2 4
+hpat1 11128 11132 TT_2 4
+hpat1 11132 11140 CCTC_2 8
+hpat1 11143 11147 AC_2 4
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hpat1 11174 11178 GA_2 4
+hpat1 11187 11193 ATT_2 6
+hpat1 11196 11200 AA_2 4
hpat1 11210 11216 CAT_2 6
+hpat1 11235 11239 AA_2 4
hpat1 11271 11275 CA_2 4
hpat1 11277 11281 TA_2 4
hpat1 11283 11287 AG_2 4
hpat1 11292 11296 TG_2 4
+hpat1 11298 11302 CC_2 4
+hpat1 11315 11319 AA_2 4
+hpat1 11320 11324 AA_2 4
hpat1 11342 11346 CA_2 4
hpat1 11346 11350 GT_2 4
-hpat1 11353 11357 AG_2 4
+hpat1 11352 11356 GA_2 4
+hpat1 11356 11360 GG_2 4
+hpat1 11387 11391 AA_2 4
+hpat1 11426 11430 TG_2 4
hpat1 11432 11440 CTGT_2 8
hpat1 11462 11468 GAA_2 6
-hpat1 11509 11513 TC_2 4
+hpat1 11470 11474 AA_2 4
+hpat1 11508 11512 CT_2 4
+hpat1 11540 11544 TT_2 4
hpat1 11557 11561 AT_2 4
-hpat1 11604 11610 CTG_2 6
+hpat1 11563 11571 TT_4 8
+hpat1 11576 11580 AC_2 4
+hpat1 11585 11589 GT_2 4
+hpat1 11603 11609 GCT_2 6
+hpat1 11614 11620 AA_3 6
hpat1 11622 11634 AGGGAA_2 12
-hpat1 11652 11664 CAA_4 12
-hpat1 11684 11690 CAA_2 6
-hpat1 11690 11698 ACAA_2 8
+hpat1 11634 11642 TT_4 8
+hpat1 11643 11647 AA_2 4
+hpat1 11650 11662 AAC_4 12
+hpat1 11662 11666 AA_2 4
+hpat1 11667 11671 CC_2 4
+hpat1 11675 11679 AA_2 4
+hpat1 11682 11688 AAC_2 6
+hpat1 11688 11696 AAAC_2 8
+hpat1 11696 11702 AA_3 6
hpat1 11703 11707 AG_2 4
hpat1 11707 11713 GAA_2 6
+hpat1 11718 11722 AC_2 4
hpat1 11729 11733 TG_2 4
hpat1 11733 11739 ACT_2 6
+hpat1 11747 11751 GG_2 4
+hpat1 11756 11760 AG_2 4
+hpat1 11780 11784 TT_2 4
hpat1 11789 11793 TG_2 4
+hpat1 11796 11800 TC_2 4
hpat1 11822 11826 AT_2 4
hpat1 11828 11832 CT_2 4
-hpat1 11894 11900 ATC_2 6
-hpat1 11900 11908 TATC_2 8
+hpat1 11834 11838 TT_2 4
+hpat1 11862 11866 TT_2 4
+hpat1 11882 11886 TT_2 4
+hpat1 11889 11897 TATC_2 8
+hpat1 11897 11909 ATCT_3 12
hpat1 11916 11924 ATCT_2 8
+hpat1 11943 11947 AG_2 4
hpat1 11973 11977 GT_2 4
hpat1 11984 11988 CT_2 4
+hpat1 11995 11999 AA_2 4
+hpat1 12001 12005 AG_2 4
hpat1 12005 12009 CT_2 4
-hpat1 12025 12029 CA_2 4
-hpat1 12057 12061 TG_2 4
+hpat1 12018 12022 TC_2 4
+hpat1 12022 12032 CATCA_2 10
+hpat1 12048 12052 AA_2 4
+hpat1 12056 12060 GT_2 4
+hpat1 12070 12078 CATG_2 8
hpat1 12089 12093 AC_2 4
hpat1 12104 12112 GTAA_2 8
hpat1 12124 12128 AC_2 4
hpat1 12138 12142 TG_2 4
hpat1 12152 12156 TC_2 4
hpat1 12171 12175 TA_2 4
+hpat1 12180 12184 AG_2 4
hpat1 12194 12204 GA_5 10
hpat1 12206 12210 AT_2 4
+hpat1 12217 12221 AA_2 4
+hpat1 12224 12228 AA_2 4
+hpat1 12242 12246 CC_2 4
+hpat1 12252 12256 AA_2 4
hpat1 12266 12270 CT_2 4
+hpat1 12272 12276 TT_2 4
+hpat1 12276 12280 AA_2 4
hpat1 12282 12286 TC_2 4
hpat1 12322 12326 CA_2 4
hpat1 12327 12331 CT_2 4
+hpat1 12335 12339 CA_2 4
hpat1 12343 12347 AC_2 4
hpat1 12388 12397 CTC_3 9
+hpat1 12401 12405 TT_2 4
hpat1 12442 12446 TG_2 4
hpat1 12452 12458 TC_3 6
+hpat1 12473 12477 TC_2 4
hpat1 12480 12484 CT_2 4
-hpat1 12496 12502 GAA_2 6
+hpat1 12485 12497 CCTCTG_2 12
+hpat1 12509 12513 CC_2 4
hpat1 12514 12520 TC_3 6
+hpat1 12554 12558 CC_2 4
hpat1 12563 12571 TCCT_2 8
hpat1 12577 12585 TGTC_2 8
hpat1 12588 12592 CT_2 4
+hpat1 12593 12597 TT_2 4
hpat1 12618 12622 TC_2 4
hpat1 12624 12628 AG_2 4
hpat1 12634 12642 TG_4 8
@@ -439,57 +825,100 @@
hpat1 12664 12668 TC_2 4
hpat1 12668 12672 TG_2 4
hpat1 12674 12680 AT_3 6
+hpat1 12730 12736 CCA_2 6
+hpat1 12743 12747 CC_2 4
+hpat1 12753 12757 CA_2 4
+hpat1 12784 12788 GG_2 4
+hpat1 12789 12793 TG_2 4
+hpat1 12794 12800 GGT_2 6
+hpat1 12820 12826 CAT_2 6
hpat1 12853 12857 TC_2 4
-hpat1 12942 12946 CA_2 4
+hpat1 12882 12886 AA_2 4
+hpat1 12898 12902 TT_2 4
+hpat1 12906 12910 AA_2 4
+hpat1 12934 12938 TT_2 4
+hpat1 12941 12945 AC_2 4
hpat1 12969 12973 TG_2 4
-hpat1 13003 13007 CT_2 4
-hpat1 13008 13012 CT_2 4
+hpat1 12977 12981 AT_2 4
+hpat1 12984 12988 CA_2 4
+hpat1 12997 13001 AC_2 4
+hpat1 13002 13012 GCTCT_2 10
hpat1 13012 13018 TAG_2 6
hpat1 13021 13025 TG_2 4
hpat1 13045 13049 TC_2 4
-hpat1 13067 13071 GT_2 4
+hpat1 13060 13064 TT_2 4
+hpat1 13066 13072 TG_3 6
hpat1 13078 13084 GAG_2 6
hpat1 13084 13088 AG_2 4
-hpat1 13109 13115 TAA_2 6
-hpat1 13115 13123 CAAA_2 8
+hpat1 13089 13093 TG_2 4
+hpat1 13107 13113 AAT_2 6
+hpat1 13113 13121 AACA_2 8
hpat1 13151 13157 GTA_2 6
hpat1 13176 13180 CT_2 4
+hpat1 13184 13190 AA_3 6
+hpat1 13199 13205 AAG_2 6
hpat1 13215 13221 CAA_2 6
hpat1 13244 13248 AG_2 4
hpat1 13248 13254 GAG_2 6
hpat1 13254 13263 CTG_3 9
+hpat1 13287 13291 TT_2 4
hpat1 13326 13332 GAG_2 6
+hpat1 13340 13344 CA_2 4
hpat1 13403 13407 GT_2 4
-hpat1 13415 13421 TAA_2 6
-hpat1 13424 13430 ATT_2 6
+hpat1 13413 13422 AAT_3 9
+hpat1 13422 13431 TTA_3 9
hpat1 13432 13438 TAA_2 6
hpat1 13438 13442 TG_2 4
+hpat1 13444 13450 ATT_2 6
hpat1 13456 13468 ACCCTA_2 12
+hpat1 13469 13473 CC_2 4
hpat1 13473 13491 TAACCC_3 18
hpat1 13491 13503 CAACCC_2 12
hpat1 13503 13521 CAGCCC_3 18
-hpat1 13527 13545 TAACCC_3 18
-hpat1 13561 13585 TAACCC_4 24
-hpat1 13597 13609 ACCCTA_2 12
-hpat1 13609 13613 AC_2 4
-hpat1 13615 13633 TAACCC_3 18
-hpat1 13663 13675 TAACCC_2 12
-hpat1 13690 13708 ACCCTC_3 18
+hpat1 13522 13546 AACCCT_4 24
+hpat1 13549 13553 AC_2 4
+hpat1 13556 13560 CC_2 4
+hpat1 13560 13584 CTAACC_4 24
+hpat1 13584 13588 CT_2 4
+hpat1 13595 13599 AC_2 4
+hpat1 13599 13611 CCTAAC_2 12
+hpat1 13611 13635 ACCCTA_4 24
+hpat1 13635 13639 CC_2 4
+hpat1 13640 13658 AACCCC_3 18
+hpat1 13658 13670 AACCCT_2 12
+hpat1 13672 13676 CC_2 4
+hpat1 13679 13683 CC_2 4
+hpat1 13685 13695 ACCCT_2 10
+hpat1 13695 13713 CACCCT_3 18
+hpat1 13720 13744 AACCCC_4 24
+hpat1 13744 13754 AACCC_2 10
+hpat1 13757 13761 CC_2 4
hpat1 13766 13778 CTCACC_2 12
hpat1 13788 13792 TG_2 4
-hpat1 13798 13802 AT_2 4
+hpat1 13793 13797 GT_2 4
+hpat1 13797 13801 TA_2 4
+hpat1 13801 13805 TT_2 4
+hpat1 13807 13811 GT_2 4
hpat1 13813 13819 TG_3 6
hpat1 13828 13834 TGC_2 6
+hpat1 13873 13877 CC_2 4
hpat1 13879 13889 GCCTT_2 10
+hpat1 13891 13895 GA_2 4
hpat1 13896 13900 TC_2 4
hpat1 13903 13907 GC_2 4
hpat1 13914 13918 AG_2 4
-hpat1 13941 13945 AC_2 4
+hpat1 13922 13926 TT_2 4
+hpat1 13935 13939 TT_2 4
+hpat1 13940 13944 CA_2 4
hpat1 13962 13966 TC_2 4
hpat1 13974 13980 ATT_2 6
+hpat1 14001 14005 TT_2 4
hpat1 14018 14022 GC_2 4
+hpat1 14049 14053 CC_2 4
hpat1 14060 14064 TG_2 4
+hpat1 14069 14073 GA_2 4
hpat1 14074 14080 TGC_2 6
+hpat1 14096 14102 CC_3 6
hpat1 14107 14111 TG_2 4
hpat1 14148 14164 GCCC_4 16
hpat1 14175 14181 GAG_2 6
@@ -502,16 +931,26 @@
hpat1 14250 14254 CT_2 4
hpat1 14261 14265 TG_2 4
hpat1 14267 14273 GAG_2 6
-hpat1 14297 14303 CGC_2 6
-hpat1 14317 14323 AG_3 6
+hpat1 14282 14288 CCG_2 6
+hpat1 14296 14300 GC_2 4
+hpat1 14300 14304 CG_2 4
+hpat1 14306 14318 GGCGCA_2 12
+hpat1 14318 14322 GA_2 4
hpat1 14323 14329 GC_3 6
hpat1 14329 14333 CG_2 4
-hpat1 14346 14350 AG_2 4
-hpat1 14350 14354 AC_2 4
+hpat1 14335 14347 GGCGCA_2 12
+hpat1 14347 14351 GA_2 4
+hpat1 14351 14355 CA_2 4
hpat1 14360 14364 GC_2 4
-hpat1 14394 14398 AG_2 4
-hpat1 14398 14406 ACGC_2 8
+hpat1 14369 14373 GG_2 4
+hpat1 14383 14395 GGCGCA_2 12
+hpat1 14395 14399 GA_2 4
+hpat1 14414 14418 GG_2 4
+hpat1 14420 14426 TGG_2 6
hpat1 14429 14433 GT_2 4
+hpat1 14455 14459 GC_2 4
+hpat1 14465 14469 GG_2 4
+hpat1 14471 14483 GG_6 12
hpat1 14492 14496 CG_2 4
hpat1 14509 14513 CG_2 4
hpat1 14513 14519 GCG_2 6
@@ -519,66 +958,111 @@
hpat1 14525 14529 CG_2 4
hpat1 14529 14533 GC_2 4
hpat1 14533 14537 AG_2 4
+hpat1 14560 14564 AA_2 4
+hpat1 14574 14580 GCC_2 6
+hpat1 14581 14589 CTTG_2 8
hpat1 14625 14629 TG_2 4
+hpat1 14634 14638 GC_2 4
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hpat1 14668 14674 CT_3 6
hpat1 14683 14689 TGG_2 6
hpat1 14692 14696 GC_2 4
+hpat1 14696 14700 CC_2 4
+hpat1 14705 14709 GC_2 4
+hpat1 14710 14714 GG_2 4
+hpat1 14726 14730 CT_2 4
hpat1 14739 14743 TA_2 4
hpat1 14743 14749 GTG_2 6
hpat1 14752 14758 CGC_2 6
hpat1 14758 14764 CTG_2 6
hpat1 14784 14790 CTC_2 6
hpat1 14799 14803 GT_2 4
+hpat1 14807 14813 GCA_2 6
hpat1 14813 14821 CGCC_2 8
+hpat1 14832 14836 GG_2 4
hpat1 14836 14840 AC_2 4
+hpat1 14849 14853 CT_2 4
hpat1 14862 14868 AGT_2 6
+hpat1 14875 14879 TA_2 4
+hpat1 14883 14889 AAC_2 6
hpat1 14895 14899 AT_2 4
hpat1 14908 14912 TC_2 4
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+hpat1 14944 14948 AA_2 4
hpat1 14949 14953 TA_2 4
+hpat1 14953 14961 AAAT_2 8
+hpat1 15010 15016 CCA_2 6
+hpat1 15038 15042 TC_2 4
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hpat1 15048 15052 GT_2 4
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+hpat1 15063 15067 TT_2 4
+hpat1 15092 15096 GA_2 4
+hpat1 15099 15105 TTA_2 6
+hpat1 15117 15121 GG_2 4
hpat1 15129 15133 TG_2 4
+hpat1 15135 15141 TT_3 6
hpat1 15152 15158 TGA_2 6
+hpat1 15158 15162 TT_2 4
+hpat1 15174 15178 GT_2 4
hpat1 15179 15183 GA_2 4
hpat1 15188 15192 TG_2 4
hpat1 15237 15241 GA_2 4
-hpat1 15308 15314 TCT_2 6
+hpat1 15267 15271 TT_2 4
+hpat1 15273 15277 TT_2 4
+hpat1 15296 15300 TT_2 4
+hpat1 15307 15311 CT_2 4
hpat1 15323 15327 TG_2 4
hpat1 15330 15336 CTG_2 6
hpat1 15336 15340 TC_2 4
hpat1 15356 15360 GT_2 4
hpat1 15385 15389 CA_2 4
hpat1 15401 15405 TG_2 4
+hpat1 15419 15423 GT_2 4
hpat1 15437 15443 CTG_2 6
hpat1 15446 15450 TG_2 4
hpat1 15470 15480 TGGAG_2 10
+hpat1 15480 15484 TT_2 4
hpat1 15486 15490 TG_2 4
hpat1 15490 15494 GA_2 4
hpat1 15506 15510 AG_2 4
hpat1 15528 15532 AT_2 4
+hpat1 15537 15541 CC_2 4
hpat1 15541 15547 TGT_2 6
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hpat1 15667 15671 TG_2 4
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hpat1 15717 15723 CTG_2 6
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hpat1 15819 15827 CAGG_2 8
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hpat1 16058 16062 TC_2 4
hpat1 16063 16067 AG_2 4
hpat1 16071 16077 AGA_2 6
@@ -586,852 +1070,1623 @@
hpat1 16098 16102 CT_2 4
hpat1 16102 16106 TG_2 4
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hpat1 23269 23273 CA_2 4
hpat1 23328 23332 AC_2 4
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hpat1 23478 23484 CAA_2 6
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hpat1 23510 23516 ATT_2 6
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hpat1 23608 23614 ATT_2 6
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hpat1 23639 23645 GCA_2 6
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hpat1 23660 23666 CAG_2 6
-hpat1 23724 23728 AG_2 4
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hpat1 23773 23777 CA_2 4
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hpat1 23825 23833 TCCA_2 8
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hpat1 23868 23874 CA_3 6
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hpat1 23931 23935 AG_2 4
hpat1 23976 23980 TG_2 4
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hpat1 24012 24016 TA_2 4
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hpat1 24046 24050 AC_2 4
hpat1 24059 24065 GAA_2 6
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hpat1 24137 24141 GA_2 4
hpat1 24149 24155 CA_3 6
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hpat1 24167 24173 TCT_2 6
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hpat1 24194 24200 CAG_2 6
hpat1 24210 24216 CT_3 6
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hpat1 24288 24292 CA_2 4
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hpat1 24919 24925 GCA_2 6
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hpat1 25160 25166 AG_3 6
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hpat1 25218 25222 GC_2 4
hpat1 25226 25230 TC_2 4
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hpat1 25346 25350 AG_2 4
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hpat1 25385 25391 GAC_2 6
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hpat1 25689 25701 ATTCAC_2 12
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hpat1 25884 25892 GAAG_2 8
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hpat1 25937 25943 AGA_2 6
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hpat1 26275 26283 AGGG_2 8
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hpat1 26354 26360 GCA_2 6
hpat1 26364 26370 AGG_2 6
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hpat1 26479 26485 TGG_2 6
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hpat1 28165 28171 GCA_2 6
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hpat1 28207 28217 CATCC_2 10
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hpat1 28301 28305 AG_2 4
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hpat1 28417 28421 CT_2 4
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hpat1 28467 28471 CA_2 4
hpat1 28479 28483 CA_2 4
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hpat1 28678 28684 ATT_2 6
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hpat1 28694 28698 CA_2 4
hpat1 28701 28705 GA_2 4
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hpat1 28916 28922 AGA_2 6
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hpat1 29003 29007 GA_2 4
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hpat1 29426 29430 CA_2 4
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hpat1 29478 29482 CA_2 4
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hpat1 29510 29516 TAA_2 6
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hpat1 29690 29694 TA_2 4
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hpat1 29747 29753 GAA_2 6
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hpat1 29796 29800 TG_2 4
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hpat1 29817 29823 TGC_2 6
hpat1 29838 29844 AT_3 6
hpat1 29844 29848 AG_2 4
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hpat1 29865 29869 CA_2 4
hpat1 29875 29881 CTG_2 6
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hpat1 29892 29900 GCTG_2 8
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hpat1 29977 29983 AGG_2 6
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hpat1 30007 30011 CT_2 4
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hpat1 30207 30211 TC_2 4
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hpat1 30248 30254 CTG_2 6
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hpat1 30277 30285 CTGG_2 8
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hpat1 30393 30405 CACC_3 12
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hpat1 30469 30473 CA_2 4
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hpat1 30643 30651 TGCT_2 8
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hpat1 30683 30693 AGCTC_2 10
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hpat1 30990 30994 AG_2 4
hpat1 30997 31005 AGGA_2 8
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hpat1 31035 31039 AG_2 4
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hpat1 31063 31069 CTC_2 6
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hpat1 31094 31098 CA_2 4
hpat1 31111 31121 TGATT_2 10
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hpat1 31230 31234 TG_2 4
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hpat1 31286 31294 GTAG_2 8
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hpat1 31371 31375 TC_2 4
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hpat1 31411 31415 GA_2 4
hpat1 31422 31428 CTG_2 6
hpat1 31453 31457 TA_2 4
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hpat1 31621 31627 TCA_2 6
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hpat1 31903 31915 GT_6 12
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hpat1 32002 32006 AC_2 4
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+hpat1 39400 39408 ACAT_2 8
+hpat1 39413 39417 TG_2 4
+hpat1 39421 39425 TA_2 4
+hpat1 39436 39440 TA_2 4
hpat1 39450 39456 TA_3 6
+hpat1 39488 39500 TTCTAG_2 12
hpat1 39513 39519 CAC_2 6
+hpat1 39528 39532 CA_2 4
+hpat1 39554 39560 CCA_2 6
hpat1 39563 39567 GT_2 4
+hpat1 39567 39571 AA_2 4
hpat1 39571 39575 GT_2 4
-hpat1 39593 39597 TC_2 4
+hpat1 39582 39586 TC_2 4
+hpat1 39586 39590 CA_2 4
+hpat1 39592 39596 CT_2 4
hpat1 39604 39610 TGT_2 6
hpat1 39642 39646 GA_2 4
hpat1 39647 39651 AG_2 4
hpat1 39656 39660 CT_2 4
hpat1 39689 39693 TC_2 4
+hpat1 39730 39734 TC_2 4
hpat1 39768 39776 CACC_2 8
+hpat1 39791 39795 TT_2 4
+hpat1 39834 39840 GGT_2 6
hpat1 39841 39845 TC_2 4
hpat1 39847 39851 TG_2 4
-hpat1 39867 39871 CT_2 4
+hpat1 39852 39856 TT_2 4
+hpat1 39866 39870 TC_2 4
+hpat1 39893 39899 TT_3 6
hpat1 39901 39905 TG_2 4
hpat1 39916 39920 CA_2 4
hpat1 39924 39930 TCT_2 6
hpat1 39933 39937 GA_2 4
hpat1 39938 39942 GT_2 4
hpat1 39948 39952 AT_2 4
+hpat1 39963 39967 TT_2 4
+hpat1 39971 39975 GG_2 4
+hpat1 39983 39989 TT_3 6
+hpat1 39997 40005 TTTG_2 8
hpat1 40023 40029 ATT_2 6
-hpat1 40062 40066 CT_2 4
+hpat1 40055 40059 AA_2 4
+hpat1 40061 40067 TC_3 6
hpat1 40090 40094 CT_2 4
+hpat1 40106 40110 TT_2 4
hpat1 40112 40116 TG_2 4
hpat1 40122 40126 CT_2 4
+hpat1 40153 40157 TT_2 4
+hpat1 40160 40164 TT_2 4
+hpat1 40175 40179 TT_2 4
+hpat1 40180 40184 GT_2 4
+hpat1 40236 40240 TT_2 4
+hpat1 40249 40253 TT_2 4
+hpat1 40294 40302 AATT_2 8
+hpat1 40312 40316 GT_2 4
+hpat1 40316 40324 AAGG_2 8
hpat1 40345 40349 AT_2 4
-hpat1 40403 40409 CTT_2 6
+hpat1 40359 40363 TT_2 4
+hpat1 40374 40380 TTA_2 6
+hpat1 40401 40407 TTC_2 6
+hpat1 40407 40411 TT_2 4
hpat1 40444 40450 TG_3 6
hpat1 40450 40454 GT_2 4
hpat1 40461 40465 GA_2 4
@@ -1439,141 +2694,246 @@
hpat1 40469 40479 TGTTC_2 10
hpat1 40487 40491 TA_2 4
hpat1 40491 40495 TC_2 4
+hpat1 40497 40501 TT_2 4
+hpat1 40502 40514 GTACCA_2 12
+hpat1 40519 40523 TT_2 4
hpat1 40538 40544 GTA_2 6
+hpat1 40584 40588 TT_2 4
hpat1 40615 40619 CT_2 4
+hpat1 40619 40623 TT_2 4
hpat1 40630 40634 AT_2 4
+hpat1 40643 40649 AGT_2 6
+hpat1 40649 40653 TT_2 4
hpat1 40661 40665 TG_2 4
+hpat1 40688 40692 GG_2 4
hpat1 40705 40709 TA_2 4
+hpat1 40716 40720 TT_2 4
hpat1 40724 40728 AT_2 4
+hpat1 40731 40737 TTC_2 6
hpat1 40755 40761 TGT_2 6
-hpat1 40772 40776 GT_2 4
+hpat1 40771 40775 TG_2 4
+hpat1 40777 40781 CT_2 4
+hpat1 40809 40813 TC_2 4
+hpat1 40818 40822 AG_2 4
hpat1 40828 40832 CA_2 4
hpat1 40855 40859 AT_2 4
-hpat1 40865 40869 CT_2 4
+hpat1 40864 40868 TC_2 4
+hpat1 40879 40883 TG_2 4
hpat1 40898 40904 ATG_2 6
hpat1 40907 40913 CT_3 6
-hpat1 40931 40935 TA_2 4
+hpat1 40928 40932 GT_2 4
+hpat1 40943 40947 TG_2 4
+hpat1 40948 40952 TT_2 4
+hpat1 40962 40966 TT_2 4
hpat1 40975 40979 GT_2 4
+hpat1 41005 41009 GA_2 4
+hpat1 41009 41013 TT_2 4
hpat1 41018 41022 GA_2 4
-hpat1 41039 41043 TA_2 4
-hpat1 41113 41117 CT_2 4
+hpat1 41026 41030 GG_2 4
+hpat1 41030 41034 TT_2 4
+hpat1 41038 41042 AT_2 4
+hpat1 41080 41084 CT_2 4
+hpat1 41106 41114 TTTC_2 8
hpat1 41127 41131 CT_2 4
-hpat1 41150 41154 AT_2 4
+hpat1 41149 41153 TA_2 4
hpat1 41163 41169 GTG_2 6
hpat1 41169 41175 AG_3 6
hpat1 41188 41192 TG_2 4
-hpat1 41204 41208 GA_2 4
+hpat1 41196 41200 TT_2 4
+hpat1 41203 41207 AG_2 4
+hpat1 41218 41222 TT_2 4
hpat1 41245 41249 TG_2 4
hpat1 41265 41269 CT_2 4
hpat1 41269 41275 TAT_2 6
hpat1 41278 41282 GA_2 4
hpat1 41308 41312 GA_2 4
+hpat1 41313 41317 TT_2 4
+hpat1 41337 41341 TT_2 4
+hpat1 41351 41355 TT_2 4
hpat1 41366 41370 GA_2 4
hpat1 41376 41380 TG_2 4
+hpat1 41381 41385 TT_2 4
hpat1 41403 41407 TG_2 4
hpat1 41430 41434 AT_2 4
hpat1 41477 41483 TGG_2 6
+hpat1 41489 41493 TT_2 4
hpat1 41496 41500 TG_2 4
hpat1 41500 41506 CTG_2 6
-hpat1 41551 41557 CAT_2 6
+hpat1 41520 41524 AT_2 4
+hpat1 41535 41539 TT_2 4
+hpat1 41550 41556 TCA_2 6
hpat1 41559 41563 AT_2 4
-hpat1 41575 41579 CT_2 4
-hpat1 41588 41592 GT_2 4
-hpat1 41592 41596 CT_2 4
-hpat1 41615 41621 ATG_2 6
-hpat1 41661 41665 CT_2 4
+hpat1 41569 41573 AA_2 4
+hpat1 41574 41578 TC_2 4
+hpat1 41578 41584 TT_3 6
+hpat1 41587 41591 TG_2 4
+hpat1 41591 41595 TC_2 4
+hpat1 41614 41620 GAT_2 6
+hpat1 41631 41635 AA_2 4
+hpat1 41643 41649 GGA_2 6
+hpat1 41652 41658 CTT_2 6
+hpat1 41660 41664 TC_2 4
hpat1 41698 41704 CTC_2 6
-hpat1 41714 41720 TGG_2 6
+hpat1 41711 41715 CT_2 4
hpat1 41728 41732 TG_2 4
+hpat1 41751 41757 TT_3 6
+hpat1 41757 41765 TGGT_2 8
hpat1 41770 41778 ATTA_2 8
hpat1 41791 41795 AG_2 4
hpat1 41808 41812 TA_2 4
hpat1 41813 41817 AG_2 4
+hpat1 41825 41829 TC_2 4
+hpat1 41849 41853 GT_2 4
hpat1 41854 41858 TG_2 4
+hpat1 41875 41881 TTC_2 6
+hpat1 41885 41889 TT_2 4
hpat1 41904 41908 AG_2 4
-hpat1 41922 41926 CT_2 4
+hpat1 41913 41917 TA_2 4
+hpat1 41921 41925 TC_2 4
hpat1 41954 41960 GTG_2 6
hpat1 41960 41964 AT_2 4
-hpat1 41984 41988 GT_2 4
-hpat1 42001 42007 CT_3 6
+hpat1 41964 41968 CC_2 4
+hpat1 41975 41981 TT_3 6
+hpat1 41983 41987 TG_2 4
+hpat1 41996 42002 TTC_2 6
+hpat1 42002 42006 TC_2 4
+hpat1 42006 42010 TT_2 4
hpat1 42010 42016 CTT_2 6
+hpat1 42042 42046 TT_2 4
+hpat1 42053 42057 TT_2 4
+hpat1 42058 42064 AA_3 6
+hpat1 42084 42090 TT_3 6
+hpat1 42096 42100 TT_2 4
hpat1 42102 42106 GT_2 4
hpat1 42111 42115 TC_2 4
hpat1 42126 42130 CT_2 4
+hpat1 42138 42146 TTAT_2 8
hpat1 42175 42179 CT_2 4
-hpat1 42184 42188 CT_2 4
-hpat1 42239 42243 CT_2 4
+hpat1 42183 42187 TC_2 4
+hpat1 42193 42197 TT_2 4
+hpat1 42200 42204 TG_2 4
+hpat1 42212 42216 GT_2 4
+hpat1 42219 42223 TT_2 4
+hpat1 42238 42242 TC_2 4
hpat1 42243 42247 TG_2 4
hpat1 42249 42253 AG_2 4
hpat1 42255 42263 GAAG_2 8
hpat1 42280 42286 CAT_2 6
+hpat1 42290 42296 CCA_2 6
+hpat1 42302 42306 CC_2 4
hpat1 42307 42313 TGC_2 6
+hpat1 42316 42322 CCT_2 6
+hpat1 42323 42327 TC_2 4
hpat1 42328 42334 TGT_2 6
-hpat1 42377 42381 CT_2 4
+hpat1 42337 42341 GA_2 4
+hpat1 42376 42380 TC_2 4
+hpat1 42385 42389 CA_2 4
hpat1 42415 42421 CTC_2 6
hpat1 42425 42429 TC_2 4
hpat1 42472 42478 TCC_2 6
hpat1 42495 42499 GT_2 4
+hpat1 42505 42509 TA_2 4
hpat1 42554 42560 GT_3 6
-hpat1 42563 42567 GA_2 4
-hpat1 42592 42596 GA_2 4
+hpat1 42562 42566 AG_2 4
+hpat1 42571 42575 TA_2 4
+hpat1 42587 42591 CA_2 4
+hpat1 42591 42595 AG_2 4
+hpat1 42597 42601 CT_2 4
hpat1 42605 42609 GA_2 4
-hpat1 42638 42644 TG_3 6
+hpat1 42626 42630 AG_2 4
+hpat1 42635 42639 AT_2 4
+hpat1 42639 42643 GT_2 4
hpat1 42650 42654 CA_2 4
hpat1 42656 42662 TGC_2 6
hpat1 42665 42669 AG_2 4
+hpat1 42679 42685 GAA_2 6
hpat1 42694 42698 AC_2 4
+hpat1 42698 42702 AA_2 4
+hpat1 42707 42711 AA_2 4
hpat1 42728 42732 TC_2 4
+hpat1 42736 42740 TT_2 4
+hpat1 42741 42747 AAG_2 6
+hpat1 42747 42751 TT_2 4
hpat1 42759 42763 TC_2 4
hpat1 42777 42781 CT_2 4
hpat1 42781 42785 CA_2 4
-hpat1 42807 42811 AC_2 4
+hpat1 42806 42810 CA_2 4
hpat1 42826 42830 CA_2 4
hpat1 42848 42852 GA_2 4
+hpat1 42852 42858 AAG_2 6
hpat1 42876 42884 CAGC_2 8
hpat1 42884 42888 TG_2 4
hpat1 42894 42900 CTG_2 6
hpat1 42900 42904 GA_2 4
-hpat1 42928 42934 GTG_2 6
-hpat1 42957 42961 TG_2 4
+hpat1 42915 42921 TGG_2 6
+hpat1 42922 42926 GG_2 4
+hpat1 42927 42931 TG_2 4
+hpat1 42938 42942 GA_2 4
+hpat1 42956 42960 GT_2 4
hpat1 42962 42968 CAG_2 6
+hpat1 43001 43005 GG_2 4
hpat1 43007 43017 GCAGG_2 10
-hpat1 43042 43048 GCA_2 6
+hpat1 43041 43047 AGC_2 6
hpat1 43051 43055 GT_2 4
+hpat1 43056 43064 TTAA_2 8
+hpat1 43064 43070 AAG_2 6
hpat1 43088 43092 TA_2 4
-hpat1 43110 43114 CA_2 4
+hpat1 43109 43113 AC_2 4
+hpat1 43126 43130 TC_2 4
+hpat1 43178 43184 TCC_2 6
hpat1 43193 43197 CT_2 4
+hpat1 43219 43223 CA_2 4
+hpat1 43248 43252 AG_2 4
+hpat1 43257 43263 GGA_2 6
hpat1 43265 43269 TG_2 4
+hpat1 43273 43277 GT_2 4
+hpat1 43294 43300 GCA_2 6
hpat1 43316 43320 AG_2 4
+hpat1 43348 43352 CA_2 4
hpat1 43352 43356 TC_2 4
+hpat1 43362 43366 GG_2 4
hpat1 43397 43403 AGG_2 6
-hpat1 43406 43412 AGC_2 6
+hpat1 43404 43408 AG_2 4
hpat1 43418 43427 CTG_3 9
hpat1 43433 43439 AGG_2 6
-hpat1 43511 43515 AG_2 4
+hpat1 43441 43445 GA_2 4
+hpat1 43483 43487 CA_2 4
+hpat1 43487 43493 AGC_2 6
+hpat1 43500 43504 CT_2 4
+hpat1 43510 43514 GA_2 4
+hpat1 43514 43518 GG_2 4
+hpat1 43522 43526 GG_2 4
hpat1 43531 43537 AG_3 6
+hpat1 43589 43595 CCT_2 6
hpat1 43596 43600 CT_2 4
+hpat1 43619 43623 GT_2 4
hpat1 43628 43634 AT_3 6
hpat1 43634 43638 TA_2 4
-hpat1 43677 43681 TC_2 4
-hpat1 43691 43695 CT_2 4
-hpat1 43707 43717 ATTCC_2 10
+hpat1 43676 43680 CT_2 4
+hpat1 43680 43690 CCATT_2 10
+hpat1 43690 43696 TC_3 6
+hpat1 43705 43715 CCATT_2 10
+hpat1 43728 43738 TTCCA_2 10
hpat1 43739 43764 TCCAT_5 25
hpat1 43764 43774 TCCAC_2 10
hpat1 43774 43784 TCCAT_2 10
hpat1 43806 43826 CACTC_4 20
hpat1 43836 43846 CACTC_2 10
-hpat1 43857 43867 ACTCC_2 10
-hpat1 43908 43918 CTCCA_2 10
+hpat1 43854 43869 TCCAC_3 15
+hpat1 43882 43892 ATTCC_2 10
+hpat1 43907 43917 ACTCC_2 10
+hpat1 43917 43921 AC_2 4
hpat1 43922 43932 ATTCC_2 10
hpat1 43948 43954 CTC_2 6
-hpat1 43967 43987 ACTCC_4 20
-hpat1 44032 44047 ACTCC_3 15
+hpat1 43964 43984 TCCAC_4 20
+hpat1 44029 44044 TCCAC_3 15
hpat1 44054 44064 TCCAT_2 10
-hpat1 44080 44090 CTACT_2 10
+hpat1 44079 44089 TCTAC_2 10
+hpat1 44101 44105 CA_2 4
hpat1 44126 44136 CACTC_2 10
hpat1 44154 44164 TCCAT_2 10
-hpat1 44172 44182 ACTCC_2 10
+hpat1 44169 44179 TCCAC_2 10
+hpat1 44180 44184 CC_2 4
hpat1 44206 44216 CATTC_2 10
hpat1 44224 44234 TCCAT_2 10
hpat1 44244 44254 TCCAT_2 10
@@ -1582,23 +2942,26 @@
hpat1 44299 44309 TCCAT_2 10
hpat1 44326 44330 CA_2 4
hpat1 44343 44347 CT_2 4
-hpat1 44363 44367 CT_2 4
+hpat1 44354 44364 TCCAC_2 10
+hpat1 44366 44370 TT_2 4
hpat1 44371 44386 CATTC_3 15
hpat1 44389 44399 TCCAT_2 10
-hpat1 44417 44432 ACTCC_3 15
+hpat1 44405 44409 CC_2 4
+hpat1 44414 44429 TCCAC_3 15
hpat1 44435 44439 AC_2 4
hpat1 44445 44449 AC_2 4
hpat1 44449 44459 TCCAT_2 10
-hpat1 44477 44487 ACTCC_2 10
+hpat1 44474 44484 TCCAC_2 10
hpat1 44494 44504 TCCAC_2 10
hpat1 44524 44534 TCCAT_2 10
hpat1 44549 44559 TCCAT_2 10
hpat1 44563 44573 CTCCA_2 10
-hpat1 44585 44589 AC_2 4
-hpat1 44592 44602 ATTCC_2 10
+hpat1 44580 44586 CCA_2 6
+hpat1 44590 44600 CCATT_2 10
hpat1 44607 44617 ATTCC_2 10
hpat1 44620 44624 AC_2 4
hpat1 44629 44639 TCCAT_2 10
+hpat1 44665 44669 CC_2 4
hpat1 44674 44684 TCCAT_2 10
hpat1 44684 44694 TCCAC_2 10
hpat1 44708 44712 CT_2 4
@@ -1606,27 +2969,31 @@
hpat1 44747 44753 ACT_2 6
hpat1 44753 44763 CTCCA_2 10
hpat1 44765 44769 AC_2 4
-hpat1 44792 44807 ACTCC_3 15
-hpat1 44812 44816 TC_2 4
+hpat1 44789 44804 TCCAC_3 15
+hpat1 44811 44815 CT_2 4
hpat1 44823 44833 CTCCA_2 10
-hpat1 44842 44852 ACTCC_2 10
-hpat1 44852 44862 ATTCC_2 10
+hpat1 44833 44843 TTCCA_2 10
+hpat1 44843 44853 CTCCA_2 10
+hpat1 44853 44863 TTCCA_2 10
hpat1 44866 44876 CATTC_2 10
-hpat1 44882 44902 ATTCC_4 20
+hpat1 44878 44903 TTCCA_5 25
hpat1 44905 44909 AC_2 4
hpat1 44909 44919 TCCAT_2 10
hpat1 44919 44934 TCCAC_3 15
hpat1 44934 44944 TCCAT_2 10
hpat1 44978 44982 CT_2 4
-hpat1 45032 45036 TC_2 4
-hpat1 45036 45040 CT_2 4
+hpat1 44993 44999 TTC_2 6
+hpat1 45029 45039 TCCTC_2 10
+hpat1 45046 45050 CT_2 4
hpat1 45050 45054 AC_2 4
-hpat1 45067 45071 TC_2 4
-hpat1 45074 45084 TCCAT_2 10
-hpat1 45107 45117 ACTCC_2 10
+hpat1 45066 45072 CT_3 6
+hpat1 45072 45076 TC_2 4
+hpat1 45076 45086 CATTC_2 10
+hpat1 45104 45114 TCCAC_2 10
+hpat1 45118 45128 TTCCA_2 10
hpat1 45139 45154 TCCAT_3 15
-hpat1 45157 45161 AC_2 4
-hpat1 45161 45171 CACTC_2 10
+hpat1 45156 45160 CA_2 4
+hpat1 45160 45170 CCACT_2 10
hpat1 45186 45190 CT_2 4
hpat1 45194 45204 TCCAT_2 10
hpat1 45205 45209 AC_2 4
@@ -1635,10 +3002,16 @@
hpat1 45242 45246 TC_2 4
hpat1 45246 45256 CATTC_2 10
hpat1 45259 45274 TCCAT_3 15
+hpat1 45287 45291 TT_2 4
+hpat1 45293 45303 TCCAC_2 10
+hpat1 45339 45343 CC_2 4
hpat1 45343 45368 TCCAT_5 25
hpat1 45368 45383 TCCAC_3 15
hpat1 45403 45413 TCCAT_2 10
+hpat1 45414 45418 CC_2 4
hpat1 45420 45424 CT_2 4
+hpat1 45429 45433 CC_2 4
+hpat1 45436 45446 ATTCC_2 10
hpat1 45446 45450 TC_2 4
hpat1 45457 45472 CTCCA_3 15
hpat1 45475 45485 CATTC_2 10
@@ -1646,44 +3019,54 @@
hpat1 45525 45545 CATTC_4 20
hpat1 45545 45555 CACTC_2 10
hpat1 45555 45575 CATTC_4 20
-hpat1 45596 45606 ACTCC_2 10
-hpat1 45611 45626 ACTCC_3 15
-hpat1 45631 45641 ACTCC_2 10
-hpat1 45646 45650 AC_2 4
+hpat1 45583 45593 TGCAC_2 10
+hpat1 45594 45604 CCACT_2 10
+hpat1 45608 45623 TCCAC_3 15
+hpat1 45628 45638 TCCAC_2 10
+hpat1 45645 45649 CA_2 4
hpat1 45653 45663 TCCAT_2 10
hpat1 45676 45686 ACTCC_2 10
hpat1 45701 45711 ACTCT_2 10
hpat1 45712 45716 CT_2 4
hpat1 45719 45723 AC_2 4
-hpat1 45731 45735 TC_2 4
+hpat1 45725 45729 TT_2 4
+hpat1 45730 45734 CT_2 4
hpat1 45737 45743 CTC_2 6
hpat1 45743 45758 TCCAC_3 15
hpat1 45770 45774 CA_2 4
-hpat1 45776 45786 ATTCC_2 10
-hpat1 45796 45806 ATTCC_2 10
-hpat1 45816 45826 ACTCC_2 10
-hpat1 45826 45836 ATTCC_2 10
+hpat1 45774 45784 CCATT_2 10
+hpat1 45794 45804 CCATT_2 10
+hpat1 45813 45823 TCCAC_2 10
+hpat1 45823 45833 TCCAT_2 10
hpat1 45839 45843 AC_2 4
hpat1 45855 45865 CATTC_2 10
hpat1 45865 45875 CACTC_2 10
hpat1 45875 45890 CATTC_3 15
hpat1 45890 45905 CACTC_3 15
hpat1 45950 45960 CACTC_2 10
-hpat1 46001 46011 ACTCC_2 10
+hpat1 45972 45976 CC_2 4
+hpat1 45998 46013 TCCAC_3 15
hpat1 46016 46031 ACTCC_3 15
hpat1 46036 46046 ATTCC_2 10
+hpat1 46059 46063 CC_2 4
hpat1 46077 46081 CT_2 4
-hpat1 46141 46151 ACTCC_2 10
-hpat1 46156 46166 ATTCC_2 10
+hpat1 46117 46127 TTCCA_2 10
+hpat1 46138 46153 TCCAC_3 15
+hpat1 46154 46164 CCATT_2 10
hpat1 46169 46173 AC_2 4
hpat1 46178 46188 TCCAT_2 10
-hpat1 46216 46226 ACTCC_2 10
+hpat1 46213 46223 TCCAC_2 10
+hpat1 46233 46243 TCCAC_2 10
hpat1 46254 46258 AC_2 4
-hpat1 46261 46265 TC_2 4
-hpat1 46301 46316 ACTCC_3 15
+hpat1 46260 46264 CT_2 4
+hpat1 46264 46274 CCACT_2 10
+hpat1 46292 46302 TTCCA_2 10
+hpat1 46302 46317 CTCCA_3 15
hpat1 46324 46328 AC_2 4
hpat1 46333 46343 TCCAT_2 10
-hpat1 46366 46376 ATTCC_2 10
+hpat1 46362 46377 TTCCA_3 15
+hpat1 46391 46401 ATTCC_2 10
+hpat1 46404 46414 CCATT_2 10
hpat1 46415 46430 CACTC_3 15
hpat1 46471 46481 ATTCC_2 10
hpat1 46494 46498 AC_2 4
@@ -1693,15 +3076,18 @@
hpat1 46567 46571 CT_2 4
hpat1 46573 46583 TCCAT_2 10
hpat1 46583 46589 TCT_2 6
-hpat1 46591 46601 AGTTC_2 10
+hpat1 46590 46600 CAGTT_2 10
hpat1 46617 46623 CTC_2 6
-hpat1 46626 46630 TC_2 4
+hpat1 46625 46629 CT_2 4
+hpat1 46635 46639 CT_2 4
hpat1 46639 46643 AC_2 4
+hpat1 46653 46659 TCC_2 6
hpat1 46683 46693 TCCAT_2 10
hpat1 46693 46703 TCCAC_2 10
hpat1 46718 46728 TCCAT_2 10
+hpat1 46733 46739 TT_3 6
hpat1 46748 46758 TCCAT_2 10
-hpat1 46761 46765 AC_2 4
+hpat1 46760 46764 CA_2 4
hpat1 46768 46778 TCCAT_2 10
hpat1 46790 46794 CT_2 4
hpat1 46798 46808 TCCAT_2 10
@@ -1709,43 +3095,53 @@
hpat1 46837 46852 CTCCA_3 15
hpat1 46871 46881 ATTCC_2 10
hpat1 46883 46887 AC_2 4
+hpat1 46897 46907 TCCAC_2 10
hpat1 46932 46942 TCCAT_2 10
+hpat1 46943 46947 CC_2 4
hpat1 46947 46967 TCCAT_4 20
hpat1 46997 47007 TCCAT_2 10
+hpat1 47008 47012 CC_2 4
hpat1 47014 47018 CT_2 4
-hpat1 47042 47057 TCCAC_3 15
+hpat1 47023 47027 CC_2 4
+hpat1 47030 47040 ATTCC_2 10
+hpat1 47041 47056 CTCCA_3 15
hpat1 47060 47070 ACTCC_2 10
hpat1 47074 47084 CATTC_2 10
hpat1 47087 47102 TCCAT_3 15
-hpat1 47110 47130 ATTCC_4 20
+hpat1 47106 47131 TTCCA_5 25
hpat1 47140 47160 ATTCC_4 20
hpat1 47160 47175 ACTCC_3 15
hpat1 47175 47185 ATTCC_2 10
-hpat1 47193 47203 GCACT_2 10
-hpat1 47205 47215 ACTCC_2 10
-hpat1 47220 47235 ACTCC_3 15
+hpat1 47192 47202 TGCAC_2 10
+hpat1 47202 47212 TCCAC_2 10
+hpat1 47217 47232 TCCAC_3 15
+hpat1 47236 47240 TT_2 4
hpat1 47240 47244 AC_2 4
hpat1 47247 47257 TCCAT_2 10
hpat1 47261 47265 CT_2 4
-hpat1 47305 47320 ACTCC_3 15
+hpat1 47302 47322 TCCAC_4 20
hpat1 47323 47327 AC_2 4
-hpat1 47335 47339 TC_2 4
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hpat1 47341 47347 CTC_2 6
hpat1 47354 47364 CACTC_2 10
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hpat1 47459 47469 CATTC_2 10
hpat1 47469 47479 CACTC_2 10
hpat1 47479 47489 CATTC_2 10
hpat1 47489 47504 CACTC_3 15
hpat1 47530 47545 ACTCC_3 15
hpat1 47553 47557 AC_2 4
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hpat1 47661 47665 TC_2 4
hpat1 47665 47673 ATTC_2 8
hpat1 47675 47679 CT_2 4
@@ -1753,55 +3149,65 @@
hpat1 47716 47726 TCCAT_2 10
hpat1 47726 47736 TCCAC_2 10
hpat1 47748 47758 CACTC_2 10
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hpat1 48442 48446 AC_2 4
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hpat1 48517 48532 ACTCC_3 15
hpat1 48545 48560 CATTC_3 15
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hpat1 48739 48743 CT_2 4
hpat1 48757 48772 TCCAT_3 15
hpat1 48774 48784 CACTC_2 10
@@ -1811,594 +3217,1135 @@
hpat1 48863 48867 AC_2 4
hpat1 48894 48904 CACTC_2 10
hpat1 48908 48912 AC_2 4
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hpat1 50100 50115 TCCAT_3 15
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hpat1 55105 55111 ATA_2 6
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hpat1 55229 55235 AT_3 6
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hpat1 55264 55274 CAGAA_2 10
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hpat1 61966 61970 TC_2 4
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hpat1 61982 61986 CA_2 4
hpat1 61999 62005 CA_3 6
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hpat1 62299 62305 CAA_2 6
hpat1 62323 62329 AGA_2 6
-hpat1 62336 62340 GA_2 4
+hpat1 62335 62339 AG_2 4
hpat1 62356 62360 AC_2 4
-hpat1 62380 62388 CAGA_2 8
+hpat1 62379 62387 ACAG_2 8
hpat1 62403 62409 GCA_2 6
+hpat1 62418 62422 TT_2 4
hpat1 62458 62462 AT_2 4
+hpat1 62469 62473 CA_2 4
hpat1 62480 62484 TC_2 4
+hpat1 62491 62497 AAG_2 6
hpat1 62506 62510 AT_2 4
+hpat1 62516 62522 TT_3 6
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hpat1 62581 62587 AT_3 6
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hpat1 62666 62672 AC_3 6
+hpat1 62672 62676 AA_2 4
hpat1 62678 62682 AG_2 4
-hpat1 62727 62733 GAA_2 6
+hpat1 62694 62698 AA_2 4
+hpat1 62703 62707 GG_2 4
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+hpat1 62725 62731 AAG_2 6
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+hpat1 62742 62748 CAA_2 6
+hpat1 62760 62776 AA_8 16
hpat1 62797 62801 AC_2 4
-hpat1 62844 62852 GAAG_2 8
+hpat1 62812 62818 AA_3 6
+hpat1 62839 62845 TAG_2 6
+hpat1 62845 62853 AAGG_2 8
hpat1 62866 62876 CAGAA_2 10
+hpat1 62889 62893 AC_2 4
hpat1 62894 62900 AGA_2 6
+hpat1 62907 62911 AA_2 4
hpat1 62914 62920 CAA_2 6
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+hpat1 62950 62954 AA_2 4
+hpat1 62981 62985 AA_2 4
hpat1 62985 62991 GA_3 6
+hpat1 63001 63005 AA_2 4
hpat1 63008 63018 GAAAT_2 10
hpat1 63020 63024 AC_2 4
+hpat1 63059 63063 AG_2 4
hpat1 63081 63085 AC_2 4
hpat1 63085 63091 CAA_2 6
hpat1 63103 63109 AGA_2 6
-hpat1 63129 63135 CA_3 6
+hpat1 63128 63134 AC_3 6
+hpat1 63165 63169 AC_2 4
+hpat1 63183 63189 AAC_2 6
+hpat1 63191 63197 AGG_2 6
hpat1 63206 63212 TAA_2 6
+hpat1 63225 63233 AAAG_2 8
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hpat1 63242 63246 CA_2 4
-hpat1 63298 63304 CTT_2 6
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hpat1 63307 63311 CT_2 4
-hpat1 63325 63331 GAG_2 6
+hpat1 63316 63320 AA_2 4
+hpat1 63324 63328 AG_2 4
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hpat1 63393 63399 TAC_2 6
-hpat1 63401 63411 GAAAA_2 10
-hpat1 63435 63439 TA_2 4
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+hpat1 63421 63425 AT_2 4
+hpat1 63434 63438 AT_2 4
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hpat1 63466 63470 GT_2 4
hpat1 63478 63484 CAG_2 6
hpat1 63484 63488 CA_2 4
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hpat1 63496 63502 ATT_2 6
hpat1 63550 63554 AT_2 4
hpat1 63574 63580 CAC_2 6
-hpat1 63674 63680 CAA_2 6
-hpat1 63685 63689 TA_2 4
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hpat1 63729 63733 CA_2 4
hpat1 63734 63738 AT_2 4
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hpat1 63844 63848 AG_2 4
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hpat1 63861 63873 GAAA_3 12
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hpat1 63906 63910 TC_2 4
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hpat1 63932 63936 TA_2 4
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hpat1 63977 63983 TAA_2 6
+hpat1 64009 64013 AA_2 4
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hpat1 64028 64034 CAG_2 6
-hpat1 64072 64076 GA_2 4
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hpat1 64125 64129 AT_2 4
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hpat1 64141 64145 CA_2 4
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hpat1 64162 64168 GAA_2 6
-hpat1 64175 64179 AC_2 4
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hpat1 64199 64203 CA_2 4
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hpat1 64267 64271 AC_2 4
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hpat1 64296 64302 GA_3 6
-hpat1 64348 64352 GA_2 4
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hpat1 64369 64375 AG_3 6
hpat1 64388 64392 AG_2 4
-hpat1 64399 64407 AGGA_2 8
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hpat1 64419 64423 TA_2 4
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hpat1 64476 64482 AG_3 6
hpat1 64500 64506 AC_3 6
-hpat1 64539 64543 GA_2 4
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hpat1 64605 64609 AG_2 4
hpat1 64617 64621 TG_2 4
hpat1 64622 64626 AG_2 4
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hpat1 64651 64657 GCA_2 6
-hpat1 64660 64664 CA_2 4
-hpat1 64692 64696 CT_2 4
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hpat1 64707 64711 AG_2 4
hpat1 64714 64718 CT_2 4
hpat1 64730 64736 CTG_2 6
-hpat1 64743 64749 AG_3 6
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hpat1 64750 64754 AG_2 4
-hpat1 64777 64781 TG_2 4
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hpat1 64788 64792 TG_2 4
hpat1 64792 64796 CA_2 4
hpat1 64833 64837 CT_2 4
hpat1 64837 64843 TG_3 6
hpat1 64843 64849 CA_3 6
hpat1 64850 64854 CA_2 4
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hpat1 64866 64870 AC_2 4
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hpat1 64914 64918 CA_2 4
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hpat1 64942 64946 AG_2 4
-hpat1 64987 64993 CA_3 6
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+hpat1 65000 65004 AT_2 4
hpat1 65010 65014 GA_2 4
hpat1 65016 65020 TG_2 4
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hpat1 65050 65054 CT_2 4
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hpat1 65063 65067 GA_2 4
hpat1 65107 65111 TG_2 4
-hpat1 65114 65120 CT_3 6
-hpat1 65160 65166 ACA_2 6
-hpat1 65184 65188 GT_2 4
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hpat1 65231 65235 GA_2 4
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+hpat1 65261 65265 GG_2 4
+hpat1 65274 65282 GAAA_2 8
+hpat1 65296 65306 CTGAG_2 10
+hpat1 65310 65314 CC_2 4
hpat1 65365 65369 CA_2 4
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hpat1 65435 65439 AT_2 4
hpat1 65443 65447 CA_2 4
hpat1 65458 65462 CT_2 4
hpat1 65468 65472 CA_2 4
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hpat1 65503 65507 TC_2 4
+hpat1 65521 65533 TT_6 12
+hpat1 65533 65537 TA_2 4
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+hpat1 65548 65552 GG_2 4
hpat1 65556 65560 TG_2 4
hpat1 65560 65564 CA_2 4
hpat1 65577 65581 AT_2 4
@@ -2408,474 +4355,965 @@
hpat1 65637 65641 TA_2 4
hpat1 65641 65645 TC_2 4
hpat1 65654 65662 TCCC_2 8
+hpat1 65666 65672 CC_3 6
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hpat1 65677 65683 ACA_2 6
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hpat1 65721 65727 TGA_2 6
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hpat1 65794 65798 CA_2 4
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hpat1 65852 65856 GA_2 4
hpat1 65856 65860 AC_2 4
hpat1 65864 65868 AC_2 4
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hpat1 65882 65888 CA_3 6
hpat1 65910 65914 GT_2 4
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hpat1 65928 65934 CTG_2 6
hpat1 65977 65981 AC_2 4
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hpat1 66060 66064 AG_2 4
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hpat1 66100 66104 TA_2 4
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hpat1 66140 66149 GAA_3 9
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hpat1 66217 66221 GA_2 4
hpat1 66230 66236 CA_3 6
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hpat1 66262 66266 TC_2 4
hpat1 66290 66294 CT_2 4
hpat1 66317 66325 GACA_2 8
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hpat1 66420 66424 AG_2 4
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hpat1 66544 66548 TC_2 4
hpat1 66548 66552 AG_2 4
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-hpat1 66681 66687 GAG_2 6
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hpat1 66710 66714 AT_2 4
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hpat1 66743 66747 TC_2 4
hpat1 66750 66756 AG_3 6
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hpat1 66791 66795 TG_2 4
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hpat1 66823 66827 AC_2 4
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hpat1 66856 66864 GAAA_2 8
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hpat1 66882 66886 AG_2 4
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hpat1 66916 66922 TCA_2 6
hpat1 66928 66934 CAG_2 6
-hpat1 66940 66946 CAG_2 6
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+hpat1 66993 67003 AAAGA_2 10
hpat1 67012 67018 GAA_2 6
hpat1 67022 67026 AT_2 4
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hpat1 67071 67077 TGG_2 6
hpat1 67079 67083 CA_2 4
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hpat1 67110 67118 CAGG_2 8
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hpat1 67142 67146 GA_2 4
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hpat1 67174 67178 TC_2 4
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hpat1 67215 67219 CA_2 4
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hpat1 67283 67287 AC_2 4
hpat1 67329 67333 TG_2 4
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hpat1 67346 67356 TAAAA_2 10
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hpat1 67408 67414 TGA_2 6
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hpat1 67459 67463 AT_2 4
hpat1 67468 67474 AT_3 6
hpat1 67474 67478 TC_2 4
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hpat1 67550 67554 AT_2 4
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hpat1 67610 67614 GT_2 4
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hpat1 67664 67672 GAAA_2 8
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hpat1 67690 67694 TC_2 4
hpat1 67702 67706 AC_2 4
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hpat1 67795 67799 AG_2 4
hpat1 67801 67805 GA_2 4
hpat1 67805 67809 AC_2 4
hpat1 67828 67834 ACC_2 6
hpat1 67844 67848 CA_2 4
-hpat1 67859 67863 TG_2 4
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hpat1 67880 67884 TG_2 4
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hpat1 67917 67923 CTT_2 6
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hpat1 67995 67999 CT_2 4
hpat1 68004 68010 TG_3 6
-hpat1 68024 68034 ACTTT_2 10
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hpat1 68066 68070 TG_2 4
hpat1 68070 68074 CT_2 4
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hpat1 68104 68110 TC_3 6
hpat1 68113 68117 AC_2 4
hpat1 68139 68143 CA_2 4
hpat1 68145 68149 AG_2 4
hpat1 68152 68156 CA_2 4
hpat1 68158 68162 GA_2 4
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hpat1 68198 68202 AG_2 4
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hpat1 68219 68225 GAT_2 6
hpat1 68229 68233 AC_2 4
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hpat1 68300 68304 TG_2 4
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hpat1 68361 68365 TG_2 4
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hpat1 68381 68391 ATGCT_2 10
hpat1 68400 68404 AT_2 4
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hpat1 68420 68424 AT_2 4
hpat1 68458 68462 AC_2 4
hpat1 68462 68468 TGA_2 6
hpat1 68478 68482 TA_2 4
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hpat1 68522 68526 GT_2 4
hpat1 68526 68538 GCCTCT_2 12
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hpat1 68573 68577 AC_2 4
hpat1 68590 68596 GAA_2 6
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hpat1 68622 68626 GA_2 4
hpat1 68636 68640 CT_2 4
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hpat1 68788 68792 AG_2 4
hpat1 68806 68812 TGT_2 6
hpat1 68821 68825 TC_2 4
-hpat1 68851 68863 AGCCTC_2 12
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-hpat1 68955 68961 GA_3 6
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hpat1 68990 68994 TG_2 4
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hpat1 69109 69115 TAA_2 6
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hpat1 69129 69133 AC_2 4
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hpat1 69150 69154 AT_2 4
-hpat1 69161 69167 CT_3 6
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hpat1 69170 69174 TC_2 4
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hpat1 69219 69223 AG_2 4
hpat1 69237 69241 AG_2 4
hpat1 69242 69246 AG_2 4
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hpat1 69253 69257 AC_2 4
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hpat1 69272 69276 CA_2 4
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hpat1 69291 69295 TC_2 4
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hpat1 69327 69331 CT_2 4
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hpat1 69415 69421 TGC_2 6
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hpat1 69450 69454 TC_2 4
hpat1 69466 69472 ATC_2 6
hpat1 69477 69483 TC_3 6
-hpat1 69489 69493 AG_2 4
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hpat1 69505 69509 TC_2 4
hpat1 69509 69513 CA_2 4
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hpat1 69591 69595 TC_2 4
hpat1 69603 69607 GA_2 4
hpat1 69612 69616 AG_2 4
-hpat1 69635 69645 CAAAA_2 10
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@@ -2885,532 +5323,1065 @@
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hpat1 90992 90998 AT_3 6
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hpat1 91981 91989 CAAT_2 8
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hpat1 93993 93997 AG_2 4
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hpat1 94161 94165 AC_2 4
hpat1 94184 94190 GCA_2 6
hpat1 94224 94228 TG_2 4
@@ -3419,185 +6390,400 @@
hpat1 94243 94249 TGG_2 6
hpat1 94264 94268 TG_2 4
hpat1 94272 94276 AT_2 4
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hpat1 96997 97001 AT_2 4
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hpat1 100383 100389 GAG_2 6
hpat1 100405 100414 CTC_3 9
hpat1 100467 100471 CT_2 4
@@ -3605,660 +6791,1404 @@
hpat1 100480 100484 CA_2 4
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hpat1 111784 111788 AT_2 4
hpat1 111788 111792 CA_2 4
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hpat1 111836 111840 GT_2 4
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hpat1 111857 111863 CTT_2 6
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hpat1 111883 111887 TC_2 4
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hpat1 111945 111949 GT_2 4
hpat1 111951 111955 TA_2 4
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hpat1 112013 112017 GA_2 4
hpat1 112018 112022 AG_2 4
hpat1 112027 112031 CT_2 4
hpat1 112034 112042 ACCA_2 8
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hpat1 112143 112149 GC_3 6
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hpat1 112181 112185 AG_2 4
hpat1 112237 112245 CTGC_2 8
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hpat1 112448 112454 CAT_2 6
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hpat1 112593 112597 TA_2 4
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hpat1 112704 112708 TG_2 4
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hpat1 112793 112799 CAA_2 6
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hpat1 112819 112823 TA_2 4
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hpat1 112848 112852 GT_2 4
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hpat1 112912 112918 TA_3 6
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hpat1 112939 112945 CTA_2 6
hpat1 112950 112954 AC_2 4
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hpat1 112973 112979 GCA_2 6
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hpat1 113051 113055 CA_2 4
hpat1 113055 113059 TA_2 4
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hpat1 113212 113216 GA_2 4
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hpat1 113224 113228 AC_2 4
hpat1 113228 113238 AGGGA_2 10
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hpat1 113277 113281 GA_2 4
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hpat1 113339 113345 GCA_2 6
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hpat1 113356 113360 CA_2 4
hpat1 113392 113396 CA_2 4
hpat1 113415 113425 TAAAA_2 10
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hpat1 113452 113464 GAAAAA_2 12
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hpat1 113517 113521 AG_2 4
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hpat1 113599 113603 TA_2 4
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hpat1 113644 113653 ATA_3 9
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hpat1 113708 113712 AG_2 4
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hpat1 113772 113776 TA_2 4
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hpat1 113799 113803 GA_2 4
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hpat1 113837 113841 AT_2 4
+hpat1 113843 113855 TTTGTT_2 12
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hpat1 113937 113941 TG_2 4
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hpat1 113983 113987 GT_2 4
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hpat1 113997 114006 TCT_3 9
hpat1 114006 114012 AGT_2 6
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hpat1 114039 114043 TC_2 4
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hpat1 114067 114071 TA_2 4
hpat1 114071 114077 TGA_2 6
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hpat1 114106 114110 AT_2 4
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hpat1 114246 114250 TA_2 4
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hpat1 114272 114276 AT_2 4
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hpat1 114284 114288 TA_2 4
hpat1 114293 114297 TA_2 4
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hpat1 114325 114329 GT_2 4
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hpat1 114379 114383 CT_2 4
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hpat1 114396 114400 AC_2 4
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hpat1 114425 114429 TG_2 4
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hpat1 114454 114464 GAATT_2 10
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hpat1 114694 114700 ATT_2 6
hpat1 114703 114707 AT_2 4
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hpat1 114896 114900 CT_2 4
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hpat1 114948 114954 TCT_2 6
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hpat1 114985 114989 CT_2 4
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hpat1 115050 115056 AGA_2 6
hpat1 115094 115098 TC_2 4
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hpat1 115136 115142 GC_3 6
hpat1 115153 115157 GC_2 4
hpat1 115194 115198 GC_2 4
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hpat1 115244 115250 AC_3 6
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hpat1 115282 115286 GC_2 4
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hpat1 115318 115322 GA_2 4
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hpat1 115364 115368 TC_2 4
hpat1 115380 115384 CA_2 4
hpat1 115391 115395 GA_2 4
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hpat1 115431 115439 CGCC_2 8
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hpat1 115553 115557 CA_2 4
hpat1 115558 115566 ACAA_2 8
hpat1 115571 115577 CAG_2 6
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hpat1 115656 115660 GA_2 4
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hpat1 115706 115712 AGC_2 6
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hpat1 115740 115744 CA_2 4
hpat1 115747 115751 AC_2 4
hpat1 115753 115757 CA_2 4
hpat1 115793 115801 CTGT_2 8
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-hpat1 115861 115867 ATC_2 6
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hpat1 115908 115918 CAGAA_2 10
hpat1 115928 115932 CT_2 4
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hpat1 115939 115943 AG_2 4
-hpat1 115947 115951 TC_2 4
-hpat1 115951 115957 CTC_2 6
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hpat1 115995 116003 TGGA_2 8
hpat1 116021 116027 GA_3 6
hpat1 116038 116044 GAT_2 6
hpat1 116051 116055 CT_2 4
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hpat1 116114 116120 AGA_2 6
hpat1 116123 116127 TA_2 4
hpat1 116144 116148 AG_2 4
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hpat1 116188 116192 GA_2 4
hpat1 116199 116205 GAA_2 6
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hpat1 116263 116273 ATGAA_2 10
hpat1 116284 116288 GA_2 4
hpat1 116298 116302 AG_2 4
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hpat1 116351 116355 TG_2 4
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hpat1 116399 116403 AG_2 4
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hpat1 116425 116429 CT_2 4
hpat1 116434 116438 AT_2 4
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hpat1 116497 116501 AG_2 4
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hpat1 116516 116522 CTC_2 6
hpat1 116522 116526 GA_2 4
hpat1 116526 116530 AG_2 4
hpat1 116540 116544 AC_2 4
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hpat1 116598 116604 AG_3 6
hpat1 116651 116657 TC_3 6
hpat1 116676 116682 AGA_2 6
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hpat1 116738 116742 AT_2 4
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hpat1 116804 116810 GA_3 6
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hpat1 116816 116822 CAC_2 6
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hpat1 116846 116854 GAAG_2 8
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hpat1 116921 116925 GA_2 4
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hpat1 116969 116975 CAT_2 6
hpat1 116992 116998 CA_3 6
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hpat1 117047 117051 AC_2 4
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hpat1 117087 117091 GT_2 4
hpat1 117120 117124 AG_2 4
hpat1 117124 117130 AC_3 6
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hpat1 117208 117212 TC_2 4
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hpat1 117247 117251 GA_2 4
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hpat1 117288 117294 CAA_2 6
hpat1 117294 117300 GAG_2 6
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-hpat1 117376 117380 GA_2 4
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hpat1 117442 117448 CAA_2 6
hpat1 117458 117464 CAA_2 6
hpat1 117487 117491 CT_2 4
hpat1 117523 117527 CT_2 4
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hpat1 117562 117568 CAC_2 6
hpat1 117568 117574 ACA_2 6
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hpat1 117610 117614 CT_2 4
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hpat1 117653 117659 TC_3 6
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hpat1 117698 117702 TC_2 4
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hpat1 117751 117757 ACT_2 6
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hpat1 117817 117821 AC_2 4
hpat1 117833 117837 TC_2 4
hpat1 117855 117861 GT_3 6
hpat1 117861 117865 AG_2 4
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hpat1 117919 117923 AC_2 4
hpat1 117931 117935 CA_2 4
-hpat1 117964 117968 CA_2 4
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hpat1 118005 118009 AG_2 4
hpat1 118025 118029 AG_2 4
hpat1 118029 118033 AC_2 4
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hpat1 118113 118119 TAA_2 6
-hpat1 118128 118134 GA_3 6
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hpat1 118146 118150 AC_2 4
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hpat1 118170 118174 AT_2 4
hpat1 118174 118180 CAC_2 6
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hpat1 118208 118212 AG_2 4
hpat1 118214 118220 TAC_2 6
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hpat1 118252 118258 AGA_2 6
hpat1 118275 118279 AC_2 4
hpat1 118281 118285 AC_2 4
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hpat1 118316 118320 TC_2 4
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hpat1 118369 118377 ACCA_2 8
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hpat1 118402 118406 CA_2 4
hpat1 118419 118423 AG_2 4
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hpat1 118485 118491 TCC_2 6
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hpat1 118513 118519 CAT_2 6
hpat1 118538 118542 AG_2 4
hpat1 118542 118546 AC_2 4
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hpat1 118556 118560 GA_2 4
-hpat1 118629 118635 AGC_2 6
-hpat1 118699 118703 TA_2 4
-hpat1 118703 118707 CA_2 4
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+hpat1 118607 118611 AA_2 4
+hpat1 118628 118634 CAG_2 6
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+hpat1 118640 118644 AA_2 4
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+hpat1 118702 118706 AC_2 4
hpat1 118728 118732 AT_2 4
hpat1 118736 118740 AG_2 4
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hpat1 118764 118768 TC_2 4
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+hpat1 118793 118797 AA_2 4
hpat1 118799 118805 CAA_2 6
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hpat1 118821 118825 CT_2 4
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hpat1 118860 118866 TAA_2 6
hpat1 118869 118877 CTAT_2 8
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hpat1 118942 118946 CA_2 4
-hpat1 118960 118966 TC_3 6
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hpat1 118985 118989 GT_2 4
hpat1 119011 119019 CAGG_2 8
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hpat1 119078 119084 GAC_2 6
+hpat1 119100 119104 AA_2 4
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hpat1 119112 119116 TC_2 4
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hpat1 119125 119129 TC_2 4
hpat1 119157 119161 TC_2 4
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hpat1 119187 119191 CA_2 4
-hpat1 119202 119206 AC_2 4
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hpat1 119206 119212 CAA_2 6
hpat1 119221 119227 AG_3 6
hpat1 119251 119255 CA_2 4
-hpat1 119266 119270 GA_2 4
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hpat1 119302 119306 TG_2 4
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hpat1 119360 119368 ACAA_2 8
-hpat1 119485 119489 CA_2 4
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+hpat1 119397 119403 GAA_2 6
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hpat1 119516 119520 AT_2 4
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hpat1 119584 119588 CA_2 4
hpat1 119604 119608 TA_2 4
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hpat1 119636 119648 TGGTAC_2 12
+hpat1 119649 119653 AA_2 4
hpat1 119654 119658 AG_2 4
-hpat1 119680 119684 AG_2 4
+hpat1 119671 119681 GAACA_2 10
+hpat1 119700 119704 CA_2 4
hpat1 119735 119739 GA_2 4
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+hpat1 119770 119776 TAA_2 6
+hpat1 119787 119791 AA_2 4
hpat1 119800 119804 AT_2 4
+hpat1 119825 119833 CCTT_2 8
hpat1 119833 119837 AC_2 4
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hpat1 119904 119910 AGA_2 6
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hpat1 120207 120211 AC_2 4
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hpat1 120443 120447 GT_2 4
hpat1 120464 120476 CTAGAA_2 12
hpat1 120508 120514 TA_3 6
@@ -4269,21 +8199,34 @@
hpat1 120553 120557 CA_2 4
hpat1 120574 120580 ATT_2 6
hpat1 120580 120584 CA_2 4
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hpat1 120926 120932 GCA_2 6
hpat1 120943 120947 CA_2 4
hpat1 120949 120953 TA_2 4
@@ -4292,400 +8235,738 @@
hpat1 120970 120974 CA_2 4
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@@ -4694,380 +8975,752 @@
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hpat1 141253 141257 TC_2 4
-hpat1 141272 141280 ATTT_2 8
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hpat1 141286 141290 TC_2 4
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hpat1 141324 141332 CAAT_2 8
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hpat1 141456 141460 TA_2 4
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hpat1 141508 141512 AC_2 4
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hpat1 141543 141547 AT_2 4
hpat1 141559 141563 AT_2 4
hpat1 141565 141569 TG_2 4
hpat1 141594 141598 AT_2 4
-hpat1 141645 141649 TC_2 4
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hpat1 141666 141670 TA_2 4
hpat1 141689 141693 AT_2 4
hpat1 141708 141714 ACA_2 6
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hpat1 141735 141739 TA_2 4
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hpat1 141759 141767 TC_4 8
hpat1 141769 141775 TCC_2 6
-hpat1 141777 141781 TC_2 4
-hpat1 141800 141812 TAATAT_2 12
-hpat1 141819 141825 ACT_2 6
-hpat1 141825 141829 CT_2 4
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hpat1 141836 141840 TG_2 4
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hpat1 141859 141865 AT_3 6
hpat1 141876 141880 TG_2 4
hpat1 141890 141894 TG_2 4
@@ -5075,33 +9728,46 @@
hpat1 141918 141924 TCC_2 6
hpat1 141934 141940 TGT_2 6
hpat1 141958 141964 ATT_2 6
-hpat1 141988 142002 GT_7 14
-hpat1 142002 142018 AT_8 16
-hpat1 142024 142030 GT_3 6
+hpat1 141987 142001 TG_7 14
+hpat1 142001 142017 TA_8 16
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hpat1 142030 142038 TATG_2 8
hpat1 142038 142042 TA_2 4
-hpat1 142052 142056 GT_2 4
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hpat1 142058 142066 AT_4 8
hpat1 142067 142073 TA_3 6
hpat1 142073 142079 TG_3 6
hpat1 142082 142092 AT_5 10
hpat1 142094 142100 ATA_2 6
hpat1 142100 142104 TA_2 4
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hpat1 142112 142116 CA_2 4
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hpat1 142154 142158 AT_2 4
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hpat1 142168 142172 GT_2 4
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hpat1 142207 142217 TCAGA_2 10
hpat1 142225 142231 CAT_2 6
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hpat1 142245 142249 TG_2 4
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hpat1 142278 142282 AG_2 4
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hpat1 142356 142360 GC_2 4
hpat1 142360 142366 AG_3 6
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hpat1 142381 142385 CA_2 4
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hpat1 142412 142416 AG_2 4
hpat1 142429 142439 GATGG_2 10
hpat1 142450 142454 TC_2 4
hpat1 142461 142465 TG_2 4
+hpat1 142465 142469 GG_2 4
hpat1 142473 142481 GTGG_2 8
hpat1 142493 142497 TG_2 4
hpat1 142498 142506 CTGC_2 8
@@ -5111,168 +9777,336 @@
hpat1 142548 142552 AT_2 4
hpat1 142590 142594 TC_2 4
hpat1 142610 142614 GT_2 4
-hpat1 142647 142653 TCT_2 6
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hpat1 142671 142675 CT_2 4
hpat1 142692 142698 CTG_2 6
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hpat1 142731 142739 CTCA_2 8
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hpat1 142806 142810 AG_2 4
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hpat1 142838 142844 CAT_2 6
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hpat1 142942 142946 TG_2 4
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hpat1 142998 143002 AT_2 4
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hpat1 143010 143014 CT_2 4
hpat1 143024 143028 TA_2 4
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-hpat1 143072 143076 CG_2 4
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hpat1 143083 143087 AG_2 4
hpat1 143087 143093 GAA_2 6
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hpat1 143134 143140 CTA_2 6
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hpat1 143165 143169 CT_2 4
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hpat1 143203 143207 AC_2 4
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hpat1 143233 143237 AT_2 4
hpat1 143243 143247 TG_2 4
hpat1 143255 143259 CA_2 4
hpat1 143263 143267 GA_2 4
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hpat1 143278 143282 AG_2 4
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hpat1 143316 143320 TG_2 4
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hpat1 143502 143506 AG_2 4
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hpat1 143546 143554 GCAG_2 8
hpat1 143574 143578 AG_2 4
hpat1 143610 143614 CT_2 4
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hpat1 143648 143652 AG_2 4
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hpat1 143683 143687 CA_2 4
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hpat1 143877 143881 TG_2 4
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hpat1 143948 143952 AG_2 4
hpat1 143975 143979 TG_2 4
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hpat1 144122 144126 AC_2 4
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hpat1 144178 144184 TAA_2 6
hpat1 144191 144197 TGA_2 6
hpat1 144198 144202 AT_2 4
hpat1 144205 144211 TCT_2 6
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hpat1 144249 144253 AT_2 4
hpat1 144255 144261 TAA_2 6
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hpat1 144281 144285 TC_2 4
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hpat1 144311 144315 CT_2 4
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hpat1 144371 144375 AT_2 4
hpat1 144382 144386 AC_2 4
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hpat1 144404 144408 TA_2 4
hpat1 144408 144412 GT_2 4
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hpat1 144518 144522 GT_2 4
hpat1 144525 144531 GTA_2 6
hpat1 144552 144560 TAAA_2 8
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hpat1 144646 144650 AC_2 4
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hpat1 144672 144678 GAA_2 6
hpat1 144679 144683 AG_2 4
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hpat1 144727 144731 TG_2 4
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hpat1 144774 144780 TGT_2 6
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hpat1 144889 144893 TG_2 4
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hpat1 144918 144922 TG_2 4
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hpat1 144985 144989 AT_2 4
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hpat1 145014 145018 CT_2 4
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hpat1 145164 145168 TA_2 4
hpat1 145182 145188 TG_3 6
hpat1 145191 145195 TG_2 4
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hpat1 145204 145212 TC_4 8
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hpat1 145233 145237 TA_2 4
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hpat1 145393 145397 GA_2 4
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hpat1 145422 145428 GTG_2 6
hpat1 145428 145434 AG_3 6
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hpat1 145504 145508 TG_2 4
hpat1 145516 145524 ATAG_2 8
hpat1 145524 145528 CT_2 4
hpat1 145528 145534 TAT_2 6
hpat1 145567 145571 GA_2 4
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hpat1 145625 145629 GA_2 4
hpat1 145635 145639 TG_2 4
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hpat1 145653 145657 CT_2 4
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hpat1 145690 145694 TA_2 4
hpat1 145736 145742 TGG_2 6
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hpat1 145755 145759 TG_2 4
hpat1 145759 145765 CTG_2 6
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hpat1 145818 145822 AT_2 4
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hpat1 145922 145930 ATTG_2 8
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hpat1 145987 145991 TG_2 4
hpat1 146009 146013 CT_2 4
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hpat1 146033 146039 ATT_2 6
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hpat1 146072 146076 AG_2 4
hpat1 146082 146088 CTT_2 6
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hpat1 146113 146117 TG_2 4
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hpat1 146163 146167 AG_2 4
hpat1 146167 146171 GT_2 4
hpat1 146173 146179 GTA_2 6
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hpat1 146203 146207 TG_2 4
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hpat1 146219 146223 AT_2 4
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hpat1 146234 146238 TA_2 4
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hpat1 146255 146259 TC_2 4
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hpat1 146268 146272 TC_2 4
hpat1 146300 146304 TC_2 4
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hpat1 146349 146355 CAA_2 6
hpat1 146364 146370 AG_3 6
hpat1 146394 146398 CA_2 4
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hpat1 146445 146449 TG_2 4
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hpat1 146503 146511 ACAA_2 8
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hpat1 146660 146664 AT_2 4
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hpat1 146728 146732 CA_2 4
hpat1 146748 146752 TA_2 4
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hpat1 146798 146802 AG_2 4
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hpat1 146841 146847 CGC_2 6
hpat1 146847 146851 AT_2 4
hpat1 146879 146883 GA_2 4
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hpat1 146944 146948 AT_2 4
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hpat1 146977 146981 AC_2 4
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hpat1 147048 147054 AGA_2 6
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hpat1 147125 147131 CAA_2 6
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hpat1 147177 147181 CA_2 4
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hpat1 147199 147203 AG_2 4
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hpat1 147226 147230 GA_2 4
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hpat1 147288 147296 CAAA_2 8
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hpat1 147351 147355 AC_2 4
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hpat1 147388 147392 CA_2 4
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hpat1 147403 147412 TCA_3 9
hpat1 147421 147425 AG_2 4
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hpat1 147447 147451 GA_2 4
hpat1 147452 147458 ATC_2 6
hpat1 147459 147463 CA_2 4
-hpat1 147511 147515 AG_2 4
+hpat1 147484 147488 AA_2 4
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hpat1 147517 147521 TG_2 4
hpat1 147521 147525 GA_2 4
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hpat1 147540 147544 AC_2 4
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hpat1 147586 147590 GT_2 4
hpat1 147607 147619 CTAGAA_2 12
hpat1 147651 147657 TA_3 6
@@ -5283,20 +10117,33 @@
hpat1 147696 147700 CA_2 4
hpat1 147717 147723 ATT_2 6
hpat1 147723 147727 CA_2 4
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hpat1 147785 147789 TG_2 4
hpat1 147790 147794 CA_2 4
hpat1 147794 147798 TA_2 4
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hpat1 147828 147834 TGA_2 6
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hpat1 147948 147952 GA_2 4
hpat1 147953 147957 CA_2 4
hpat1 147960 147964 AC_2 4
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hpat1 147978 147982 CA_2 4
hpat1 147982 147986 CT_2 4
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hpat1 147992 147998 TGT_2 6
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hpat1 148066 148072 GCA_2 6
hpat1 148083 148087 CA_2 4
hpat1 148089 148093 TA_2 4
@@ -5304,54 +10151,111 @@
hpat1 148110 148114 CA_2 4
hpat1 148115 148119 TG_2 4
hpat1 148119 148123 CA_2 4
+hpat1 148131 148135 AA_2 4
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hpat1 148171 148175 AT_2 4
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-hpat1 148275 148279 AT_2 4
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hpat1 148298 148304 ATG_2 6
hpat1 148304 148308 AT_2 4
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hpat1 148340 148344 GA_2 4
hpat1 148349 148353 TG_2 4
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hpat1 148385 148389 AT_2 4
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hpat1 148902 148906 TG_2 4
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hpat1 149342 149346 AT_2 4
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hpat1 149375 149381 TAT_2 6
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hpat1 149393 149397 CT_2 4
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hpat1 149473 149483 AGTTT_2 10
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hpat1 149568 149574 GT_3 6
hpat1 149577 149581 TG_2 4
hpat1 149589 149593 CA_2 4
@@ -5359,112 +10263,239 @@
hpat1 149652 149656 GA_2 4
hpat1 149668 149674 TGG_2 6
hpat1 149684 149688 TC_2 4
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hpat1 152734 152738 CA_2 4
hpat1 152738 152742 GT_2 4
hpat1 152744 152748 CT_2 4
@@ -5472,114 +10503,218 @@
hpat1 152794 152798 TC_2 4
hpat1 152829 152833 TC_2 4
hpat1 152853 152861 AC_4 8
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hpat1 154370 154376 AGG_2 6
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hpat1 155097 155107 CA_5 10
hpat1 155117 155125 TACA_2 8
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@@ -5587,308 +10722,663 @@
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@@ -5896,302 +11386,637 @@
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hpat1 173733 173737 AT_2 4
hpat1 173749 173753 TC_2 4
@@ -6201,377 +12026,752 @@
hpat1 173817 173823 CTC_2 6
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hpat1 175406 175410 CT_2 4
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@@ -6579,286 +12779,573 @@
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@@ -6866,177 +13353,314 @@
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@@ -7045,425 +13669,885 @@
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hpat1 211962 211968 TGG_2 6
hpat1 211990 211994 CT_2 4
hpat1 212011 212017 AGG_2 6
@@ -7471,327 +14555,657 @@
hpat1 212087 212091 AG_2 4
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hpat1 221855 221859 CA_2 4
hpat1 221880 221886 AGG_2 6
hpat1 221888 221892 GA_2 4
@@ -7799,35 +15213,64 @@
hpat1 221912 221918 AGT_2 6
hpat1 221926 221932 GTA_2 6
hpat1 221935 221939 TG_2 4
+hpat1 221941 221945 TA_2 4
hpat1 221947 221951 TG_2 4
hpat1 221985 221989 GA_2 4
hpat1 221994 222004 TCCCC_2 10
-hpat1 222027 222033 AGG_2 6
+hpat1 222008 222020 AA_6 12
+hpat1 222024 222033 AGG_3 9
+hpat1 222034 222040 GGA_2 6
+hpat1 222059 222065 AAC_2 6
hpat1 222093 222097 GA_2 4
hpat1 222098 222102 AG_2 4
+hpat1 222102 222106 TT_2 4
hpat1 222107 222111 CT_2 4
hpat1 222141 222145 TC_2 4
hpat1 222156 222168 GCCTCC_2 12
+hpat1 222182 222186 TC_2 4
hpat1 222220 222228 CACC_2 8
-hpat1 222259 222263 AG_2 4
+hpat1 222235 222243 CTGA_2 8
+hpat1 222243 222247 TT_2 4
+hpat1 222251 222255 TT_2 4
+hpat1 222255 222261 TAG_2 6
+hpat1 222265 222269 GG_2 4
hpat1 222292 222296 TC_2 4
-hpat1 222355 222359 CG_2 4
+hpat1 222298 222302 AC_2 4
+hpat1 222354 222358 GC_2 4
+hpat1 222385 222389 CT_2 4
+hpat1 222390 222394 AA_2 4
+hpat1 222404 222408 CT_2 4
hpat1 222425 222433 GTCA_2 8
-hpat1 222497 222501 AT_2 4
+hpat1 222442 222446 GA_2 4
+hpat1 222468 222472 TT_2 4
+hpat1 222496 222502 TA_3 6
hpat1 222522 222526 TG_2 4
hpat1 222535 222539 TA_2 4
+hpat1 222540 222546 TTC_2 6
+hpat1 222558 222564 ATT_2 6
hpat1 222582 222586 TC_2 4
-hpat1 222611 222619 TGAA_2 8
+hpat1 222609 222617 AATG_2 8
hpat1 222619 222623 CT_2 4
-hpat1 222661 222665 GA_2 4
+hpat1 222628 222632 TT_2 4
+hpat1 222640 222644 AA_2 4
+hpat1 222646 222650 TG_2 4
+hpat1 222655 222663 AAGA_2 8
+hpat1 222664 222672 AAAT_2 8
+hpat1 222683 222687 CA_2 4
hpat1 222702 222706 TA_2 4
+hpat1 222730 222734 AA_2 4
+hpat1 222739 222743 CT_2 4
hpat1 222745 222749 CT_2 4
+hpat1 222759 222763 GG_2 4
+hpat1 222779 222783 TG_2 4
+hpat1 222787 222791 AG_2 4
hpat1 222802 222806 AG_2 4
hpat1 222815 222821 CTG_2 6
hpat1 222821 222831 TGGAG_2 10
hpat1 222832 222836 TG_2 4
hpat1 222846 222850 AG_2 4
hpat1 222874 222878 GA_2 4
+hpat1 222880 222886 GGA_2 6
hpat1 222891 222895 AG_2 4
hpat1 222898 222902 AT_2 4
hpat1 222902 222906 TC_2 4
@@ -7835,30 +15278,49 @@
hpat1 222928 222934 CTT_2 6
hpat1 222965 222969 GA_2 4
hpat1 222989 222993 GC_2 4
+hpat1 223001 223005 CC_2 4
+hpat1 223017 223023 ATT_2 6
hpat1 223047 223051 TC_2 4
-hpat1 223092 223096 GT_2 4
+hpat1 223056 223060 CC_2 4
+hpat1 223079 223087 CAAT_2 8
+hpat1 223091 223095 TG_2 4
+hpat1 223103 223111 GAAA_2 8
+hpat1 223115 223119 AT_2 4
hpat1 223122 223128 TG_3 6
-hpat1 223130 223134 TA_2 4
+hpat1 223129 223133 AT_2 4
hpat1 223138 223142 TC_2 4
+hpat1 223142 223146 AA_2 4
+hpat1 223148 223152 TT_2 4
hpat1 223161 223165 GT_2 4
+hpat1 223208 223212 TT_2 4
hpat1 223226 223230 AG_2 4
+hpat1 223245 223251 AA_3 6
hpat1 223255 223259 TA_2 4
hpat1 223261 223265 AC_2 4
hpat1 223269 223273 TA_2 4
hpat1 223273 223281 AGCC_2 8
hpat1 223282 223286 TG_2 4
-hpat1 223311 223315 CT_2 4
+hpat1 223290 223296 ATT_2 6
+hpat1 223310 223314 TC_2 4
hpat1 223331 223337 TAT_2 6
hpat1 223350 223354 TC_2 4
hpat1 223363 223369 GAT_2 6
-hpat1 223385 223389 GA_2 4
+hpat1 223384 223388 AG_2 4
hpat1 223405 223411 CA_3 6
hpat1 223411 223415 AT_2 4
-hpat1 223457 223463 GAA_2 6
+hpat1 223421 223425 AA_2 4
+hpat1 223430 223434 AG_2 4
+hpat1 223450 223454 TG_2 4
+hpat1 223455 223464 AAG_3 9
+hpat1 223468 223472 TT_2 4
hpat1 223475 223479 TC_2 4
hpat1 223493 223497 TG_2 4
-hpat1 223531 223537 GTT_2 6
+hpat1 223529 223535 TTG_2 6
+hpat1 223541 223545 GG_2 4
+hpat1 223546 223550 TT_2 4
hpat1 223556 223562 TCT_2 6
+hpat1 223571 223577 GAA_2 6
+hpat1 223577 223583 ACT_2 6
hpat1 223606 223610 CA_2 4
hpat1 223613 223617 TA_2 4
hpat1 223619 223625 TG_3 6
@@ -7866,196 +15328,356 @@
hpat1 223632 223636 GT_2 4
hpat1 223638 223644 TAA_2 6
hpat1 223659 223663 TG_2 4
-hpat1 223734 223738 CA_2 4
+hpat1 223678 223682 AA_2 4
+hpat1 223691 223695 AA_2 4
+hpat1 223723 223731 GGTG_2 8
+hpat1 223733 223737 AC_2 4
hpat1 223774 223778 GA_2 4
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hpat1 223784 223788 TC_2 4
-hpat1 223814 223818 TG_2 4
-hpat1 223818 223824 GTG_2 6
+hpat1 223792 223796 AA_2 4
+hpat1 223800 223804 AA_2 4
+hpat1 223813 223817 GT_2 4
+hpat1 223817 223823 GGT_2 6
+hpat1 223823 223827 GC_2 4
hpat1 223847 223853 AGG_2 6
+hpat1 223862 223866 GA_2 4
hpat1 223903 223907 GA_2 4
hpat1 223908 223912 CA_2 4
hpat1 223920 223924 CT_2 4
hpat1 223936 223940 AG_2 4
hpat1 223950 223954 TC_2 4
+hpat1 223954 223958 AA_2 4
+hpat1 223959 223971 AA_6 12
+hpat1 223972 223976 AA_2 4
hpat1 223978 223982 CA_2 4
-hpat1 224019 224023 TC_2 4
-hpat1 224023 224029 TGT_2 6
-hpat1 224044 224048 GA_2 4
+hpat1 224018 224024 CT_3 6
+hpat1 224026 224032 TG_3 6
+hpat1 224043 224049 AG_3 6
hpat1 224074 224080 CT_3 6
hpat1 224084 224088 TC_2 4
hpat1 224100 224104 GT_2 4
hpat1 224109 224113 CA_2 4
+hpat1 224118 224122 AA_2 4
+hpat1 224127 224131 CA_2 4
+hpat1 224139 224143 CC_2 4
hpat1 224165 224169 TC_2 4
hpat1 224170 224176 AG_3 6
hpat1 224192 224198 GAA_2 6
+hpat1 224199 224203 CT_2 4
+hpat1 224203 224207 TA_2 4
+hpat1 224218 224222 CA_2 4
hpat1 224245 224249 CT_2 4
+hpat1 224260 224264 AA_2 4
+hpat1 224270 224276 CTG_2 6
hpat1 224292 224296 AG_2 4
+hpat1 224296 224300 TT_2 4
+hpat1 224323 224329 TAA_2 6
+hpat1 224349 224353 AG_2 4
+hpat1 224376 224382 GGA_2 6
hpat1 224387 224391 TA_2 4
+hpat1 224392 224396 AA_2 4
hpat1 224417 224421 GC_2 4
hpat1 224439 224445 AGG_2 6
hpat1 224495 224499 GA_2 4
+hpat1 224523 224527 GA_2 4
+hpat1 224528 224532 AA_2 4
hpat1 224533 224537 GA_2 4
hpat1 224537 224541 CT_2 4
-hpat1 224549 224561 CAA_4 12
+hpat1 224544 224548 AA_2 4
+hpat1 224548 224560 ACA_4 12
+hpat1 224560 224566 AA_3 6
+hpat1 224568 224572 AT_2 4
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+hpat1 224583 224587 AT_2 4
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hpat1 224638 224642 TA_2 4
hpat1 224645 224649 TC_2 4
+hpat1 224660 224664 AA_2 4
hpat1 224670 224674 TA_2 4
-hpat1 224680 224684 AT_2 4
+hpat1 224679 224685 TA_3 6
+hpat1 224685 224691 AAT_2 6
hpat1 224724 224728 CA_2 4
hpat1 224760 224764 TC_2 4
hpat1 224767 224771 AT_2 4
hpat1 224772 224776 AG_2 4
hpat1 224806 224810 CT_2 4
-hpat1 224849 224853 AT_2 4
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hpat1 224887 224891 CT_2 4
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hpat1 224926 224930 CA_2 4
hpat1 224958 224966 AGGC_2 8
+hpat1 224981 224985 GA_2 4
hpat1 224987 224991 GA_2 4
+hpat1 225014 225018 CC_2 4
hpat1 225019 225023 TC_2 4
+hpat1 225027 225031 AA_2 4
+hpat1 225035 225041 AA_3 6
hpat1 225052 225058 TGG_2 6
hpat1 225083 225089 AGG_2 6
+hpat1 225098 225102 GA_2 4
hpat1 225115 225119 GA_2 4
hpat1 225122 225126 AG_2 4
hpat1 225172 225176 AG_2 4
hpat1 225177 225181 GA_2 4
hpat1 225186 225190 TC_2 4
+hpat1 225190 225208 AA_9 18
+hpat1 225214 225220 GAA_2 6
hpat1 225222 225226 TA_2 4
hpat1 225230 225234 TC_2 4
hpat1 225235 225239 AT_2 4
hpat1 225253 225257 TA_2 4
hpat1 225257 225263 AGG_2 6
hpat1 225264 225270 GTG_2 6
+hpat1 225271 225275 AT_2 4
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hpat1 225354 225358 CA_2 4
hpat1 225363 225369 ATT_2 6
-hpat1 225388 225392 AC_2 4
-hpat1 225411 225415 AG_2 4
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+hpat1 225387 225391 CA_2 4
+hpat1 225395 225399 AA_2 4
+hpat1 225401 225413 AATTAG_2 12
hpat1 225415 225419 CA_2 4
-hpat1 225469 225477 CA_4 8
-hpat1 225477 225481 TA_2 4
-hpat1 225517 225521 GA_2 4
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hpat1 225522 225526 GA_2 4
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hpat1 225540 225546 AGT_2 6
-hpat1 225559 225563 CT_2 4
-hpat1 225617 225629 GACTCT_2 12
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+hpat1 225574 225578 GA_2 4
+hpat1 225590 225598 GAAA_2 8
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+hpat1 225616 225628 TGACTC_2 12
hpat1 225635 225639 TC_2 4
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hpat1 225651 225657 TAA_2 6
hpat1 225657 225661 GA_2 4
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hpat1 225683 225687 AT_2 4
hpat1 225695 225699 AG_2 4
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hpat1 225759 225763 AG_2 4
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hpat1 225802 225806 TG_2 4
hpat1 225828 225832 AG_2 4
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hpat1 225895 225899 CA_2 4
hpat1 225909 225913 AG_2 4
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hpat1 225973 225979 GTG_2 6
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hpat1 226065 226069 TC_2 4
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+hpat1 226121 226129 GAAA_2 8
+hpat1 226133 226137 AT_2 4
hpat1 226140 226144 TA_2 4
-hpat1 226148 226152 TA_2 4
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hpat1 226156 226160 TC_2 4
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hpat1 226177 226181 AT_2 4
-hpat1 226309 226313 GA_2 4
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hpat1 226331 226337 TA_3 6
hpat1 226344 226348 AG_2 4
hpat1 226351 226355 AC_2 4
-hpat1 226360 226364 AT_2 4
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hpat1 226365 226373 TA_4 8
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hpat1 226382 226386 TA_2 4
hpat1 226387 226393 AT_3 6
-hpat1 226409 226415 TAC_2 6
-hpat1 226417 226421 AC_2 4
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hpat1 226450 226454 AT_2 4
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hpat1 226469 226473 AT_2 4
hpat1 226493 226499 ATC_2 6
hpat1 226520 226524 TG_2 4
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hpat1 226577 226581 CA_2 4
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hpat1 226635 226639 AT_2 4
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hpat1 226651 226655 TG_2 4
hpat1 226656 226662 ATT_2 6
hpat1 226680 226684 AG_2 4
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hpat1 226713 226719 TA_3 6
hpat1 226746 226750 AC_2 4
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+hpat1 226778 226784 CAG_2 6
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hpat1 226824 226828 TG_2 4
hpat1 226833 226837 TG_2 4
hpat1 226868 226872 AG_2 4
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hpat1 226898 226902 AG_2 4
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hpat1 226940 226944 TC_2 4
hpat1 226978 226982 AC_2 4
hpat1 226988 226992 CT_2 4
-hpat1 227020 227024 CT_2 4
-hpat1 227077 227083 CT_3 6
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hpat1 227124 227128 AT_2 4
hpat1 227129 227133 GA_2 4
hpat1 227143 227147 AG_2 4
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-hpat1 227193 227201 GAAA_2 8
-hpat1 227227 227233 AGG_2 6
+hpat1 227149 227153 GA_2 4
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+hpat1 227174 227180 AT_3 6
+hpat1 227188 227192 AA_2 4
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+hpat1 227224 227233 AGG_3 9
hpat1 227237 227241 AG_2 4
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hpat1 227253 227257 TA_2 4
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hpat1 227280 227284 CT_2 4
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hpat1 227312 227318 TA_3 6
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hpat1 227397 227403 TAA_2 6
hpat1 227411 227415 TA_2 4
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+hpat1 227448 227452 AG_2 4
hpat1 227458 227462 GA_2 4
hpat1 227465 227473 CTTC_2 8
-hpat1 227479 227483 TA_2 4
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hpat1 227493 227499 AGA_2 6
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hpat1 227531 227535 AT_2 4
hpat1 227536 227540 GA_2 4
hpat1 227549 227555 AT_3 6
hpat1 227555 227559 TG_2 4
+hpat1 227569 227577 AATG_2 8
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hpat1 227591 227595 AG_2 4
-hpat1 227653 227657 AT_2 4
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hpat1 227721 227727 TAG_2 6
-hpat1 227739 227743 TC_2 4
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hpat1 227750 227754 AT_2 4
hpat1 227756 227760 TC_2 4
-hpat1 227764 227768 TA_2 4
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hpat1 227786 227792 GAA_2 6
hpat1 227818 227822 TA_2 4
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hpat1 227873 227879 ACT_2 6
-hpat1 227924 227928 CT_2 4
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hpat1 227945 227949 TG_2 4
-hpat1 227969 227977 GCAT_2 8
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+hpat1 227968 227976 TGCA_2 8
hpat1 227981 227985 CA_2 4
hpat1 227994 227998 AT_2 4
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hpat1 228017 228025 ATGG_2 8
-hpat1 228030 228036 TA_3 6
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+hpat1 228039 228043 AA_2 4
hpat1 228043 228047 TG_2 4
hpat1 228047 228051 AT_2 4
hpat1 228051 228055 AC_2 4
-hpat1 228062 228068 TAT_2 6
-hpat1 228082 228090 GAAA_2 8
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+hpat1 228081 228089 AGAA_2 8
+hpat1 228100 228104 TG_2 4
hpat1 228104 228110 ACA_2 6
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hpat1 228152 228156 AC_2 4
hpat1 228177 228181 TC_2 4
hpat1 228186 228192 TG_3 6
+hpat1 228199 228203 AA_2 4
hpat1 228217 228221 AC_2 4
hpat1 228221 228227 AG_3 6
hpat1 228232 228238 TGG_2 6
hpat1 228261 228267 GAA_2 6
+hpat1 228348 228354 TAA_2 6
hpat1 228357 228361 TG_2 4
hpat1 228364 228368 TA_2 4
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+hpat1 228406 228410 CA_2 4
+hpat1 228411 228417 AA_3 6
hpat1 228428 228432 GA_2 4
hpat1 228434 228440 TGA_2 6
hpat1 228440 228444 AT_2 4
hpat1 228473 228477 CA_2 4
hpat1 228480 228484 TA_2 4
+hpat1 228492 228496 AA_2 4
hpat1 228499 228503 CA_2 4
-hpat1 228528 228534 ATT_2 6
+hpat1 228516 228520 AT_2 4
+hpat1 228525 228534 ATT_3 9
+hpat1 228541 228545 TA_2 4
hpat1 228564 228576 ATAAAA_2 12
+hpat1 228583 228591 AATT_2 8
hpat1 228596 228600 AT_2 4
+hpat1 228603 228607 AC_2 4
+hpat1 228611 228615 AA_2 4
+hpat1 228620 228628 AAAG_2 8
hpat1 228646 228650 CA_2 4
hpat1 228656 228660 CA_2 4
hpat1 228667 228671 TC_2 4
+hpat1 228688 228696 AGGC_2 8
hpat1 228719 228723 GA_2 4
-hpat1 228736 228740 TA_2 4
+hpat1 228735 228739 AT_2 4
+hpat1 228742 228746 AA_2 4
+hpat1 228746 228750 CC_2 4
hpat1 228751 228755 TC_2 4
+hpat1 228759 228763 AA_2 4
+hpat1 228767 228771 AA_2 4
hpat1 228808 228814 CTA_2 6
hpat1 228817 228823 AGG_2 6
hpat1 228825 228829 GA_2 4
@@ -8066,488 +15688,961 @@
hpat1 228909 228913 GA_2 4
hpat1 228913 228917 CT_2 4
hpat1 228918 228922 TC_2 4
-hpat1 228941 228949 GAAA_2 8
+hpat1 228922 228940 AA_9 18
+hpat1 228940 228948 AGAA_2 8
hpat1 228952 228958 GAA_2 6
+hpat1 228969 228973 TT_2 4
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hpat1 228991 228997 AGA_2 6
+hpat1 229002 229008 ATT_2 6
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hpat1 229022 229026 CT_2 4
+hpat1 229032 229036 AT_2 4
hpat1 229043 229049 TAA_2 6
+hpat1 229056 229062 AAT_2 6
hpat1 229068 229072 GA_2 4
hpat1 229076 229080 TC_2 4
+hpat1 229082 229086 TT_2 4
hpat1 229090 229094 TC_2 4
hpat1 229133 229137 GA_2 4
hpat1 229141 229145 CA_2 4
+hpat1 229147 229151 AA_2 4
+hpat1 229167 229171 TG_2 4
+hpat1 229171 229177 CCT_2 6
hpat1 229185 229189 TA_2 4
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hpat1 229259 229263 CT_2 4
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hpat1 229757 229763 GAG_2 6
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hpat1 230010 230016 AGA_2 6
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hpat1 230561 230591 TA_15 30
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hpat1 231906 231912 GCA_2 6
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hpat1 232104 232124 CA_10 20
hpat1 232134 232138 AG_2 4
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hpat1 232374 232382 GTCT_2 8
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hpat1 232421 232431 CAGAG_2 10
hpat1 232435 232441 GA_3 6
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hpat1 232610 232628 GAAAAA_3 18
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hpat1 233373 233379 CAG_2 6
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hpat1 233422 233432 TGTTT_2 10
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hpat1 234000 234004 GA_2 4
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hpat1 234151 234155 GA_2 4
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hpat1 234190 234194 GA_2 4
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hpat1 234854 234860 AC_3 6
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hpat1 235199 235207 AGTG_2 8
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hpat1 235783 235789 CA_3 6
hpat1 235808 235814 AGG_2 6
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hpat1 235870 235874 AC_2 4
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hpat1 235906 235910 CT_2 4
hpat1 235911 235915 TC_2 4
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hpat1 236096 236102 GTT_2 6
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hpat1 236162 236166 TG_2 4
hpat1 236166 236170 CA_2 4
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hpat1 242102 242118 AGAT_4 16
hpat1 242121 242161 AGAT_10 40
hpat1 242161 242165 AC_2 4
@@ -8556,108 +16651,208 @@
hpat1 242185 242191 TA_3 6
hpat1 242196 242200 AT_2 4
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hpat1 243073 243077 AG_2 4
hpat1 243078 243082 TC_2 4
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hpat1 243104 243108 AT_2 4
-hpat1 243111 243115 AC_2 4
-hpat1 243120 243126 CAC_2 6
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hpat1 243128 243134 TA_3 6
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hpat1 243196 243202 TCT_2 6
hpat1 243211 243215 TG_2 4
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hpat1 243240 243246 AC_3 6
hpat1 243258 243264 TCA_2 6
hpat1 243267 243271 TG_2 4
hpat1 243279 243283 GA_2 4
+hpat1 243306 243310 GA_2 4
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hpat1 243321 243329 GAAG_2 8
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hpat1 243395 243399 AG_2 4
-hpat1 243474 243484 GA_5 10
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hpat1 243487 243493 AC_3 6
hpat1 243493 243499 AG_3 6
-hpat1 243504 243514 AG_5 10
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hpat1 243517 243521 AG_2 4
hpat1 243538 243542 TG_2 4
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hpat1 243586 243590 TG_2 4
hpat1 243602 243606 AC_2 4
hpat1 243606 243610 AG_2 4
hpat1 243629 243635 CAG_2 6
hpat1 243649 243653 CA_2 4
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hpat1 243729 243735 CTC_2 6
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hpat1 243771 243775 AG_2 4
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hpat1 243817 243821 TG_2 4
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hpat1 243865 243871 CTC_2 6
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hpat1 243926 243932 GTA_2 6
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hpat1 243988 243996 CAGA_2 8
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hpat1 244030 244034 TC_2 4
hpat1 244035 244041 TCA_2 6
hpat1 244055 244059 TC_2 4
hpat1 244064 244068 CA_2 4
hpat1 244081 244085 AC_2 4
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hpat1 244137 244141 TG_2 4
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hpat1 244205 244211 TG_3 6
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hpat1 244269 244273 TG_2 4
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hpat1 244289 244295 TGC_2 6
hpat1 244304 244312 TCCT_2 8
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hpat1 244391 244397 CAA_2 6
hpat1 244407 244413 CAT_2 6
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hpat1 244443 244447 AG_2 4
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hpat1 244501 244507 CTC_2 6
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hpat1 244519 244523 AT_2 4
hpat1 244524 244528 TA_2 4
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hpat1 244546 244552 TCT_2 6
hpat1 244561 244569 TCAT_2 8
hpat1 244591 244599 TATC_2 8
hpat1 244603 244607 GA_2 4
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hpat1 244652 244658 TCC_2 6
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hpat1 244732 244736 GA_2 4
hpat1 244737 244741 AG_2 4
-hpat1 244747 244755 CAGG_2 8
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hpat1 244755 244759 GA_2 4
hpat1 244788 244792 GT_2 4
-hpat1 244798 244804 AG_3 6
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hpat1 244808 244812 AG_2 4
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hpat1 244844 244848 CT_2 4
hpat1 244855 244859 TC_2 4
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hpat1 244900 244904 AG_2 4
hpat1 244912 244922 GCAGG_2 10
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hpat1 244937 244941 AT_2 4
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hpat1 244963 244967 GA_2 4
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hpat1 245098 245102 TA_2 4
hpat1 245102 245108 AGG_2 6
hpat1 245108 245114 GA_3 6
@@ -8665,261 +16860,537 @@
hpat1 245157 245161 TG_2 4
hpat1 245164 245176 TATT_3 12
hpat1 245192 245200 CAGA_2 8
-hpat1 245222 245226 AC_2 4
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hpat1 245244 245250 ATG_2 6
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hpat1 245308 245314 TG_3 6
hpat1 245322 245326 CA_2 4
hpat1 245326 245330 GA_2 4
hpat1 245337 245341 CT_2 4
hpat1 245380 245386 TCA_2 6
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hpat1 245404 245408 CA_2 4
hpat1 245418 245422 CA_2 4
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hpat1 245432 245436 AT_2 4
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hpat1 245454 245458 GA_2 4
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hpat1 245500 245504 TA_2 4
hpat1 245507 245515 ACAA_2 8
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hpat1 245541 245547 ATA_2 6
hpat1 245549 245555 ATT_2 6
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hpat1 245572 245576 TA_2 4
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hpat1 245589 245593 TC_2 4
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hpat1 245694 245698 AT_2 4
hpat1 245701 245709 ATTT_2 8
hpat1 245710 245714 AC_2 4
hpat1 245730 245734 GA_2 4
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hpat1 245873 245877 GT_2 4
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hpat1 245952 245956 AG_2 4
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hpat1 246023 246027 AT_2 4
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hpat1 246039 246047 CATC_2 8
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hpat1 246090 246094 CT_2 4
hpat1 246100 246104 AT_2 4
hpat1 246120 246124 TA_2 4
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hpat1 246268 246272 AT_2 4
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hpat1 246296 246332 GTTT_9 36
hpat1 246335 246339 GA_2 4
hpat1 246340 246344 AG_2 4
hpat1 246349 246353 CT_2 4
hpat1 246383 246387 TC_2 4
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hpat1 246426 246434 TCCT_2 8
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hpat1 246604 246608 GA_2 4
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hpat1 246665 246669 TG_2 4
hpat1 246674 246680 CAG_2 6
hpat1 246682 246686 TG_2 4
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hpat1 246718 246722 TG_2 4
hpat1 246722 246726 AT_2 4
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hpat1 246745 246751 CAT_2 6
hpat1 246760 246764 TG_2 4
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hpat1 246823 246827 TA_2 4
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hpat1 246943 246947 TG_2 4
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hpat1 246991 246995 AC_2 4
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hpat1 247016 247020 AC_2 4
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hpat1 247137 247141 TC_2 4
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hpat1 247233 247239 AGG_2 6
hpat1 247262 247266 CG_2 4
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hpat1 247302 247306 TC_2 4
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hpat1 247406 247410 TG_2 4
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hpat1 247449 247455 TAT_2 6
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hpat1 247473 247477 TC_2 4
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hpat1 247533 247537 GA_2 4
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hpat1 247648 247652 CT_2 4
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hpat1 247681 247687 TG_3 6
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hpat1 247722 247726 GA_2 4
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hpat1 247752 247756 AG_2 4
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hpat1 247802 247808 ATC_2 6
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hpat1 247857 247861 TA_2 4
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hpat1 247894 247898 TG_2 4
hpat1 247898 247902 TC_2 4
hpat1 247902 247906 AG_2 4
hpat1 247907 247911 CT_2 4
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hpat1 247921 247927 AT_3 6
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hpat1 247949 247953 AT_2 4
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hpat1 247967 247973 TA_3 6
hpat1 247976 247980 CA_2 4
hpat1 247985 247991 AGC_2 6
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hpat1 248049 248055 ATC_2 6
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hpat1 248089 248093 AC_2 4
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hpat1 248134 248138 CA_2 4
hpat1 248156 248160 AT_2 4
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hpat1 248176 248180 GA_2 4
hpat1 248208 248212 AC_2 4
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hpat1 248240 248246 TG_3 6
hpat1 248246 248250 GT_2 4
hpat1 248252 248256 AG_2 4
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hpat1 248273 248279 AGG_2 6
hpat1 248279 248283 GA_2 4
hpat1 248284 248288 CA_2 4
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hpat1 248303 248307 CA_2 4
hpat1 248318 248324 TGC_2 6
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hpat1 248402 248406 AG_2 4
hpat1 248432 248438 CAC_2 6
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hpat1 248463 248471 TAAA_2 8
hpat1 248483 248487 TA_2 4
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hpat1 248521 248531 GTGCT_2 10
hpat1 248537 248541 AG_2 4
hpat1 248571 248575 GA_2 4
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hpat1 248587 248611 TG_12 24
hpat1 248612 248630 GT_9 18
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hpat1 248665 248677 TGGCAG_2 12
hpat1 248711 248717 GCA_2 6
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hpat1 248737 248741 CA_2 4
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hpat1 248755 248759 AG_2 4
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hpat1 248770 248774 GA_2 4
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hpat1 248779 248783 AC_2 4
hpat1 248796 248802 GCA_2 6
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hpat1 248860 248864 TG_2 4
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hpat1 248882 248890 GCAG_2 8
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hpat1 248949 248953 TC_2 4
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hpat1 248989 248993 CA_2 4
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hpat1 249046 249050 CT_2 4
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hpat1 249106 249110 CA_2 4
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hpat1 249142 249148 GCC_2 6
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hpat1 249183 249189 AGG_2 6
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hpat1 249255 249261 TCT_2 6
hpat1 249269 249273 TC_2 4
hpat1 249283 249287 GT_2 4
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hpat1 249336 249340 GT_2 4
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hpat1 249472 249476 TA_2 4
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hpat1 249708 249714 TGG_2 6
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hpat1 249797 249801 CA_2 4
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hpat1 249842 249848 ATA_2 6
hpat1 249848 249852 GA_2 4
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hpat1 249870 249874 CT_2 4
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hpat1 250025 250031 AGC_2 6
hpat1 250038 250046 CTGA_2 8
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hpat1 250105 250117 CTCAAT_2 12
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hpat1 250152 250156 GA_2 4
hpat1 250199 250203 TC_2 4
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hpat1 250350 250354 TC_2 4
hpat1 250375 250381 GCC_2 6
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hpat1 250450 250454 TA_2 4
-hpat1 250500 250512 GAA_4 12
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hpat1 250546 250550 AC_2 4
hpat1 250550 250554 TG_2 4
-hpat1 250572 250576 AG_2 4
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hpat1 250670 250676 TAT_2 6
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hpat1 250710 250714 TA_2 4
hpat1 250714 250720 ATG_2 6
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hpat1 250798 250802 GA_2 4
hpat1 250825 250829 CT_2 4
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hpat1 250876 250880 GA_2 4
hpat1 250883 250887 AG_2 4
hpat1 250900 250904 GA_2 4
-hpat1 250932 250936 GA_2 4
-hpat1 250954 250970 TAAA_4 16
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hpat1 250979 250983 TA_2 4
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hpat1 251018 251026 ATGG_2 8
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hpat1 251057 251065 CAGC_2 8
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hpat1 251088 251092 AC_2 4
hpat1 251113 251119 CAA_2 6
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hpat1 251187 251191 GA_2 4
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hpat1 251257 251263 TAA_2 6
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hpat1 251308 251312 AG_2 4
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hpat1 251348 251354 AGG_2 6
hpat1 251354 251360 CTT_2 6
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hpat1 251407 251411 TG_2 4
hpat1 251415 251419 CT_2 4
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hpat1 251545 251551 GCT_2 6
hpat1 251607 251613 TGG_2 6
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hpat1 251646 251650 TG_2 4
hpat1 251655 251659 GA_2 4
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hpat1 251711 251717 TAA_2 6
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hpat1 251823 251829 TGG_2 6
hpat1 251830 251838 CAGG_2 8
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hpat1 251862 251866 TG_2 4
hpat1 251902 251908 ACA_2 6
hpat1 251916 251922 TGA_2 6
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hpat1 252042 252046 CG_2 4
hpat1 252071 252077 GC_3 6
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hpat1 252128 252132 TC_2 4
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hpat1 252213 252221 GCCC_2 8
hpat1 252228 252236 TGAT_2 8
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hpat1 252276 252280 AC_2 4
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hpat1 252299 252303 CG_2 4
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hpat1 252324 252328 AC_2 4
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hpat1 252375 252379 AC_2 4
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hpat1 252399 252403 CA_2 4
hpat1 252406 252410 CA_2 4
hpat1 252414 252418 AC_2 4
hpat1 252420 252424 AC_2 4
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hpat1 252504 252512 CAAC_2 8
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hpat1 252541 252545 TA_2 4
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hpat1 252704 252708 TA_2 4
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hpat1 252780 252784 CT_2 4
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hpat1 252822 252826 AT_2 4
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hpat1 253035 253041 CTA_2 6
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hpat1 253063 253069 TGG_2 6
hpat1 253094 253100 AGG_2 6
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hpat1 253148 253152 AG_2 4
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hpat1 253182 253186 AG_2 4
hpat1 253196 253200 TC_2 4
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hpat1 253270 253274 TG_2 4
hpat1 253274 253278 AG_2 4
hpat1 253280 253284 GC_2 4
@@ -8927,469 +17398,853 @@
hpat1 253290 253294 CT_2 4
hpat1 253308 253312 AC_2 4
hpat1 253332 253336 TG_2 4
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hpat1 253344 253350 CT_3 6
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hpat1 253627 253631 TC_2 4
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hpat1 253888 253894 CAT_2 6
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hpat1 253979 253988 TAA_3 9
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hpat1 254071 254077 GTG_2 6
hpat1 254080 254084 TC_2 4
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hpat1 254120 254126 TCC_2 6
hpat1 254134 254138 TC_2 4
hpat1 254140 254146 TAG_2 6
hpat1 254161 254165 CA_2 4
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hpat1 254198 254202 AG_2 4
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hpat1 254351 254357 CT_3 6
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hpat1 254540 254548 ATGT_2 8
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hpat1 254697 254701 AG_2 4
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hpat1 254785 254793 GAAT_2 8
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hpat1 255136 255140 AC_2 4
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hpat1 255232 255238 GAA_2 6
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hpat1 255327 255335 TATT_2 8
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hpat1 255417 255421 TG_2 4
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hpat1 255454 255460 TAG_2 6
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hpat1 255531 255537 CAA_2 6
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hpat1 255585 255595 TGCAG_2 10
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hpat1 255745 255749 CA_2 4
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hpat1 255780 255786 AGG_2 6
hpat1 255795 255799 AG_2 4
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hpat1 255818 255826 CAGG_2 8
hpat1 255840 255846 CTT_2 6
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hpat1 255878 255882 CA_2 4
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hpat1 256045 256053 ACCA_2 8
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hpat1 256068 256072 GA_2 4
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hpat1 256130 256140 AGGGA_2 10
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hpat1 256178 256186 GAGG_2 8
hpat1 256192 256196 AG_2 4
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hpat1 256402 256408 GA_3 6
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hpat1 256504 256508 TG_2 4
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hpat1 256589 256597 AC_4 8
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hpat1 256933 256939 TAA_2 6
hpat1 256959 256968 ATT_3 9
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hpat1 257122 257128 CTG_2 6
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hpat1 257492 257496 GA_2 4
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hpat1 257530 257536 GTG_2 6
hpat1 257540 257544 CA_2 4
hpat1 257562 257568 CTC_2 6
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hpat1 257824 257828 TC_2 4
hpat1 257840 257849 CAC_3 9
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hpat1 258027 258031 CA_2 4
hpat1 258070 258074 TC_2 4
+hpat1 258076 258080 CC_2 4
hpat1 258083 258087 CT_2 4
-hpat1 258090 258100 CTTTT_2 10
+hpat1 258087 258097 TTTCT_2 10
+hpat1 258100 258108 AAGA_2 8
hpat1 258114 258118 CT_2 4
+hpat1 258164 258168 CT_2 4
hpat1 258169 258173 TC_2 4
hpat1 258187 258193 TCC_2 6
+hpat1 258225 258229 GC_2 4
+hpat1 258232 258238 CCA_2 6
+hpat1 258250 258254 TT_2 4
+hpat1 258257 258263 TT_3 6
hpat1 258265 258269 AG_2 4
+hpat1 258271 258275 GG_2 4
hpat1 258322 258328 TCC_2 6
+hpat1 258342 258346 AA_2 4
hpat1 258350 258354 GA_2 4
-hpat1 258372 258376 AC_2 4
+hpat1 258367 258373 CCA_2 6
+hpat1 258381 258387 CCA_2 6
hpat1 258389 258393 CT_2 4
+hpat1 258405 258411 TT_3 6
hpat1 258429 258433 TG_2 4
hpat1 258477 258481 TA_2 4
+hpat1 258503 258507 GG_2 4
hpat1 258534 258538 CT_2 4
hpat1 258546 258550 CT_2 4
hpat1 258562 258566 CT_2 4
+hpat1 258569 258577 CTCA_2 8
hpat1 258582 258586 GT_2 4
+hpat1 258596 258604 TTCC_2 8
hpat1 258618 258622 CA_2 4
hpat1 258637 258641 TG_2 4
hpat1 258651 258655 AG_2 4
hpat1 258680 258686 CTT_2 6
hpat1 258710 258716 TGG_2 6
hpat1 258718 258722 CA_2 4
+hpat1 258750 258758 AGGC_2 8
hpat1 258781 258785 GA_2 4
+hpat1 258804 258808 AA_2 4
+hpat1 258808 258812 CC_2 4
hpat1 258816 258822 CTA_2 6
+hpat1 258822 258826 AA_2 4
+hpat1 258830 258834 AA_2 4
hpat1 258846 258852 TGG_2 6
hpat1 258854 258858 CA_2 4
hpat1 258885 258889 GA_2 4
-hpat1 258892 258896 GA_2 4
+hpat1 258891 258895 AG_2 4
hpat1 258909 258915 AGG_2 6
hpat1 258933 258937 GA_2 4
+hpat1 258961 258965 GA_2 4
hpat1 258966 258970 AG_2 4
hpat1 258975 258979 CT_2 4
hpat1 258980 258984 TC_2 4
-hpat1 258986 258992 GAA_2 6
-hpat1 259015 259047 AGGG_8 32
+hpat1 258984 258993 AAG_3 9
+hpat1 258993 259001 GAAG_2 8
+hpat1 259002 259014 AAGG_3 12
+hpat1 259014 259046 GAGG_8 32
hpat1 259047 259059 GAAA_3 12
hpat1 259059 259067 GAAG_2 8
-hpat1 259076 259084 GAAA_2 8
-hpat1 259084 259088 AG_2 4
+hpat1 259067 259079 AAAGAA_2 12
+hpat1 259081 259085 AA_2 4
+hpat1 259085 259089 GA_2 4
hpat1 259094 259102 AG_4 8
-hpat1 259105 259117 GAAA_3 12
+hpat1 259102 259114 AAAG_3 12
+hpat1 259114 259118 AA_2 4
+hpat1 259120 259124 AA_2 4
hpat1 259124 259130 GA_3 6
+hpat1 259130 259138 AAGG_2 8
hpat1 259141 259149 GAAG_2 8
hpat1 259149 259161 GAAA_3 12
hpat1 259161 259171 AGAAA_2 10
+hpat1 259192 259196 CC_2 4
hpat1 259199 259203 GA_2 4
+hpat1 259223 259227 TT_2 4
hpat1 259235 259239 TC_2 4
-hpat1 259268 259272 AG_2 4
+hpat1 259242 259246 GT_2 4
+hpat1 259267 259271 GA_2 4
hpat1 259273 259277 CT_2 4
hpat1 259285 259289 GT_2 4
+hpat1 259300 259304 TT_2 4
hpat1 259305 259311 AGG_2 6
+hpat1 259312 259316 AA_2 4
+hpat1 259334 259338 GT_2 4
hpat1 259366 259370 GT_2 4
-hpat1 259383 259389 TC_3 6
+hpat1 259382 259390 CT_4 8
+hpat1 259391 259395 CC_2 4
+hpat1 259407 259411 TT_2 4
+hpat1 259416 259420 GG_2 4
hpat1 259425 259431 ACC_2 6
hpat1 259441 259445 GT_2 4
hpat1 259445 259451 GAG_2 6
+hpat1 259456 259460 GG_2 4
hpat1 259460 259464 AC_2 4
-hpat1 259482 259488 CT_3 6
-hpat1 259488 259494 CAG_2 6
+hpat1 259481 259489 TC_4 8
+hpat1 259489 259495 AGC_2 6
hpat1 259516 259520 CT_2 4
hpat1 259520 259524 TC_2 4
+hpat1 259526 259530 CC_2 4
+hpat1 259557 259563 CCA_2 6
+hpat1 259569 259575 GGT_2 6
hpat1 259605 259609 AG_2 4
-hpat1 259614 259618 CA_2 4
+hpat1 259613 259617 AC_2 4
hpat1 259619 259623 TC_2 4
+hpat1 259624 259628 AA_2 4
+hpat1 259662 259666 CA_2 4
+hpat1 259675 259679 CC_2 4
hpat1 259685 259689 TC_2 4
hpat1 259695 259699 TG_2 4
hpat1 259702 259706 AG_2 4
hpat1 259726 259734 TATT_2 8
+hpat1 259738 259742 CC_2 4
+hpat1 259744 259748 GA_2 4
hpat1 259754 259760 CAC_2 6
hpat1 259772 259776 CT_2 4
+hpat1 259786 259790 CC_2 4
hpat1 259796 259800 TC_2 4
hpat1 259848 259852 CA_2 4
+hpat1 259860 259864 AA_2 4
+hpat1 259864 259872 CCTT_2 8
hpat1 259902 259910 CTTT_2 8
+hpat1 259914 259924 TT_5 10
+hpat1 259928 259936 AA_4 8
+hpat1 259936 259944 TT_4 8
hpat1 259953 259957 TC_2 4
hpat1 259958 259962 CT_2 4
hpat1 259986 259990 CA_2 4
hpat1 259991 259995 TC_2 4
-hpat1 260033 260037 CT_2 4
-hpat1 260108 260112 AG_2 4
-hpat1 260121 260127 CAT_2 6
+hpat1 260032 260036 TC_2 4
+hpat1 260075 260081 CCA_2 6
+hpat1 260092 260096 TT_2 4
+hpat1 260100 260104 TT_2 4
+hpat1 260104 260110 TAG_2 6
+hpat1 260120 260126 TCA_2 6
+hpat1 260227 260231 AG_2 4
+hpat1 260235 260239 TT_2 4
hpat1 260250 260260 TACTC_2 10
hpat1 260260 260266 AGC_2 6
hpat1 260272 260276 CT_2 4
-hpat1 260289 260297 ATTT_2 8
+hpat1 260286 260290 CA_2 4
+hpat1 260296 260300 TG_2 4
+hpat1 260327 260331 CT_2 4
+hpat1 260362 260366 TC_2 4
hpat1 260369 260373 CA_2 4
hpat1 260388 260392 AG_2 4
+hpat1 260414 260418 TT_2 4
+hpat1 260419 260423 TT_2 4
+hpat1 260423 260427 GG_2 4
+hpat1 260429 260435 GG_3 6
hpat1 260447 260453 AGA_2 6
+hpat1 260457 260463 GAA_2 6
hpat1 260471 260481 AGGAG_2 10
+hpat1 260481 260489 AAGG_2 8
+hpat1 260489 260493 AA_2 4
hpat1 260497 260503 AGG_2 6
hpat1 260503 260509 GA_3 6
hpat1 260514 260523 GAA_3 9
hpat1 260549 260553 CT_2 4
-hpat1 260556 260560 AC_2 4
+hpat1 260555 260561 CA_3 6
hpat1 260567 260571 TG_2 4
hpat1 260574 260580 TCA_2 6
-hpat1 260583 260587 AG_2 4
+hpat1 260582 260586 GA_2 4
+hpat1 260595 260599 GG_2 4
+hpat1 260601 260605 CC_2 4
+hpat1 260605 260615 CAACC_2 10
hpat1 260617 260621 AG_2 4
-hpat1 260697 260701 CT_2 4
+hpat1 260627 260631 CC_2 4
+hpat1 260631 260639 AAGG_2 8
+hpat1 260660 260664 GG_2 4
+hpat1 260696 260702 TC_3 6
hpat1 260707 260711 AG_2 4
+hpat1 260725 260731 TTC_2 6
+hpat1 260741 260747 ACC_2 6
hpat1 260755 260759 CT_2 4
+hpat1 260768 260772 AA_2 4
hpat1 260805 260809 AC_2 4
hpat1 260837 260841 AG_2 4
hpat1 260844 260848 AC_2 4
-hpat1 260860 260864 TG_2 4
+hpat1 260856 260862 CTG_2 6
hpat1 260890 260894 AG_2 4
hpat1 260905 260909 CA_2 4
+hpat1 260913 260917 CC_2 4
+hpat1 260954 260958 CC_2 4
hpat1 260958 260966 TCCC_2 8
-hpat1 260986 260990 AC_2 4
+hpat1 260985 260989 CA_2 4
+hpat1 261001 261005 CC_2 4
hpat1 261011 261017 AG_3 6
hpat1 261030 261034 AG_2 4
hpat1 261034 261038 TG_2 4
+hpat1 261047 261051 AG_2 4
+hpat1 261059 261063 AA_2 4
hpat1 261067 261071 CA_2 4
hpat1 261079 261083 TC_2 4
-hpat1 261110 261114 TC_2 4
+hpat1 261102 261106 AT_2 4
+hpat1 261109 261113 CT_2 4
+hpat1 261114 261118 GG_2 4
hpat1 261139 261143 CT_2 4
-hpat1 261172 261178 CTC_2 6
+hpat1 261171 261175 TC_2 4
hpat1 261195 261199 GA_2 4
hpat1 261206 261210 CA_2 4
-hpat1 261224 261228 AG_2 4
+hpat1 261213 261217 GG_2 4
+hpat1 261223 261227 GA_2 4
+hpat1 261236 261240 CC_2 4
+hpat1 261250 261254 GA_2 4
+hpat1 261260 261264 AA_2 4
hpat1 261269 261275 GAG_2 6
+hpat1 261286 261290 GG_2 4
hpat1 261329 261335 AG_3 6
+hpat1 261342 261346 CC_2 4
+hpat1 261357 261365 GGCT_2 8
+hpat1 261380 261384 AT_2 4
hpat1 261387 261393 GTG_2 6
+hpat1 261415 261419 GA_2 4
+hpat1 261422 261426 GA_2 4
+hpat1 261442 261446 GG_2 4
+hpat1 261461 261469 GAAT_2 8
hpat1 261479 261483 AG_2 4
hpat1 261498 261502 CA_2 4
-hpat1 261584 261590 TGG_2 6
+hpat1 261504 261508 AA_2 4
+hpat1 261516 261520 AG_2 4
+hpat1 261531 261535 AA_2 4
+hpat1 261542 261548 AAG_2 6
+hpat1 261570 261574 AC_2 4
+hpat1 261582 261588 GGT_2 6
+hpat1 261607 261611 GG_2 4
+hpat1 261622 261628 GGT_2 6
+hpat1 261764 261770 AGG_2 6
+hpat1 261777 261781 AC_2 4
hpat1 261788 261792 AG_2 4
+hpat1 261793 261799 CCT_2 6
hpat1 261801 261805 GC_2 4
+hpat1 261813 261817 GA_2 4
+hpat1 261832 261836 CA_2 4
+hpat1 261842 261846 GG_2 4
hpat1 261874 261883 ACC_3 9
-hpat1 261901 261905 CT_2 4
-hpat1 261913 261921 GCAT_2 8
+hpat1 261900 261904 TC_2 4
+hpat1 261912 261920 TGCA_2 8
+hpat1 261942 261946 CA_2 4
hpat1 261946 261952 TCT_2 6
-hpat1 261957 261961 AG_2 4
+hpat1 261956 261960 GA_2 4
+hpat1 261962 261966 CT_2 4
hpat1 261987 261991 TG_2 4
-hpat1 262031 262037 CAG_2 6
+hpat1 261994 262000 GAA_2 6
+hpat1 262009 262013 CC_2 4
+hpat1 262020 262024 CT_2 4
+hpat1 262030 262036 GCA_2 6
hpat1 262045 262049 AG_2 4
+hpat1 262055 262059 GG_2 4
hpat1 262078 262082 AG_2 4
+hpat1 262085 262089 GG_2 4
+hpat1 262090 262094 AG_2 4
+hpat1 262097 262101 GG_2 4
+hpat1 262102 262106 GG_2 4
hpat1 262108 262112 GA_2 4
-hpat1 262129 262133 AC_2 4
-hpat1 262177 262186 CTT_3 9
+hpat1 262119 262123 CC_2 4
+hpat1 262128 262134 CA_3 6
+hpat1 262152 262158 CCA_2 6
+hpat1 262170 262176 TT_3 6
+hpat1 262176 262188 TCT_4 12
hpat1 262222 262226 GC_2 4
hpat1 262227 262231 TC_2 4
-hpat1 262295 262299 AC_2 4
+hpat1 262260 262266 CAG_2 6
+hpat1 262270 262274 GT_2 4
+hpat1 262277 262283 CCA_2 6
+hpat1 262294 262300 CA_3 6
hpat1 262303 262309 TGG_2 6
hpat1 262309 262313 GA_2 4
-hpat1 262334 262342 GCTG_2 8
-hpat1 262351 262357 TGC_2 6
+hpat1 262313 262317 GG_2 4
+hpat1 262319 262323 GG_2 4
+hpat1 262325 262329 CC_2 4
+hpat1 262332 262338 CTG_2 6
+hpat1 262350 262356 CTG_2 6
+hpat1 262362 262366 GC_2 4
+hpat1 262369 262373 AG_2 4
+hpat1 262375 262379 GA_2 4
+hpat1 262435 262441 TCC_2 6
hpat1 262445 262451 TCT_2 6
hpat1 262466 262472 GCT_2 6
hpat1 262472 262480 CTGC_2 8
+hpat1 262492 262496 GG_2 4
+hpat1 262497 262501 GG_2 4
hpat1 262511 262517 CAG_2 6
hpat1 262521 262527 AGG_2 6
+hpat1 262552 262556 CC_2 4
hpat1 262556 262562 AGG_2 6
hpat1 262565 262571 AGG_2 6
hpat1 262576 262580 TC_2 4
+hpat1 262594 262598 GG_2 4
hpat1 262616 262622 CA_3 6
+hpat1 262631 262637 GGT_2 6
+hpat1 262638 262642 AA_2 4
hpat1 262649 262653 CT_2 4
hpat1 262653 262657 AG_2 4
+hpat1 262659 262663 TT_2 4
+hpat1 262666 262670 CC_2 4
+hpat1 262675 262679 GA_2 4
+hpat1 262698 262702 AA_2 4
+hpat1 262736 262740 CC_2 4
hpat1 262741 262745 CT_2 4
hpat1 262759 262763 GT_2 4
hpat1 262765 262769 CT_2 4
-hpat1 262784 262788 TC_2 4
+hpat1 262783 262787 CT_2 4
hpat1 262798 262802 TC_2 4
hpat1 262805 262809 AG_2 4
hpat1 262809 262815 AC_3 6
hpat1 262825 262829 GA_2 4
+hpat1 262839 262843 GG_2 4
hpat1 262860 262864 AC_2 4
+hpat1 262901 262907 TCC_2 6
hpat1 262907 262915 AG_4 8
-hpat1 262943 262949 ACC_2 6
+hpat1 262917 262921 CC_2 4
+hpat1 262928 262932 GG_2 4
+hpat1 262941 262947 CCA_2 6
+hpat1 262947 262951 CC_2 4
hpat1 262957 262963 CAG_2 6
hpat1 262963 262969 GT_3 6
-hpat1 262993 263003 CAGGC_2 10
+hpat1 262982 262986 AA_2 4
+hpat1 262991 262995 CA_2 4
+hpat1 262998 263006 CAGG_2 8
+hpat1 263017 263021 GA_2 4
hpat1 263071 263075 AG_2 4
+hpat1 263083 263093 GGATT_2 10
hpat1 263105 263111 TA_3 6
-hpat1 263133 263137 TC_2 4
+hpat1 263117 263121 CA_2 4
+hpat1 263132 263138 CT_3 6
+hpat1 263160 263164 AA_2 4
+hpat1 263166 263172 GGA_2 6
+hpat1 263189 263195 AGT_2 6
hpat1 263207 263213 GT_3 6
hpat1 263237 263241 AG_2 4
+hpat1 263251 263255 GG_2 4
+hpat1 263262 263266 AG_2 4
hpat1 263270 263274 GT_2 4
hpat1 263293 263297 CT_2 4
-hpat1 263325 263329 GA_2 4
+hpat1 263320 263326 AAG_2 6
+hpat1 263326 263330 AG_2 4
+hpat1 263335 263339 GG_2 4
hpat1 263374 263378 CT_2 4
hpat1 263378 263384 GCT_2 6
-hpat1 263454 263460 CTT_2 6
-hpat1 263501 263507 TCT_2 6
+hpat1 263389 263393 CC_2 4
+hpat1 263402 263408 GG_3 6
+hpat1 263452 263458 TTC_2 6
+hpat1 263458 263462 TT_2 4
+hpat1 263491 263497 TGC_2 6
+hpat1 263500 263504 CT_2 4
hpat1 263529 263535 GAT_2 6
+hpat1 263546 263550 GG_2 4
+hpat1 263565 263569 CA_2 4
hpat1 263571 263575 CT_2 4
hpat1 263580 263584 CT_2 4
hpat1 263585 263589 AG_2 4
hpat1 263610 263614 AG_2 4
+hpat1 263618 263622 CC_2 4
hpat1 263652 263656 AG_2 4
hpat1 263675 263679 GT_2 4
+hpat1 263690 263696 GTT_2 6
hpat1 263704 263710 TA_3 6
hpat1 263734 263738 AC_2 4
hpat1 263740 263744 AG_2 4
hpat1 263744 263748 GT_2 4
+hpat1 263761 263767 TGG_2 6
hpat1 263768 263774 AGC_2 6
+hpat1 263777 263781 CT_2 4
hpat1 263798 263802 TG_2 4
+hpat1 263811 263815 CC_2 4
+hpat1 263815 263819 CT_2 4
hpat1 263845 263849 CA_2 4
+hpat1 263855 263859 GG_2 4
+hpat1 263873 263877 AA_2 4
hpat1 263878 263882 TC_2 4
hpat1 263888 263896 AGTG_2 8
-hpat1 263900 263904 CG_2 4
+hpat1 263899 263905 GC_3 6
hpat1 263919 263923 TC_2 4
+hpat1 263927 263931 CT_2 4
+hpat1 263947 263951 GG_2 4
hpat1 263961 263967 GAA_2 6
+hpat1 263982 263988 GGA_2 6
hpat1 263990 263996 CAC_2 6
-hpat1 264020 264024 AG_2 4
-hpat1 264026 264032 CG_3 6
+hpat1 264007 264011 GG_2 4
+hpat1 264019 264023 GA_2 4
+hpat1 264025 264031 GC_3 6
hpat1 264033 264037 TG_2 4
hpat1 264037 264041 CG_2 4
hpat1 264041 264049 GAGG_2 8
-hpat1 264058 264070 AGGG_3 12
-hpat1 264074 264082 AGGG_2 8
-hpat1 264106 264118 AGGG_3 12
+hpat1 264056 264068 GGAG_3 12
+hpat1 264071 264083 GGGA_3 12
+hpat1 264084 264092 GGAG_2 8
+hpat1 264104 264116 GGAG_3 12
+hpat1 264119 264127 GGGA_2 8
hpat1 264139 264145 CGG_2 6
-hpat1 264166 264174 AGGG_2 8
-hpat1 264202 264226 AGGG_6 24
-hpat1 264250 264262 AGGG_3 12
+hpat1 264164 264172 GGAG_2 8
+hpat1 264200 264224 GGAG_6 24
+hpat1 264228 264236 GGAG_2 8
+hpat1 264248 264260 GGAG_3 12
+hpat1 264263 264271 GGGA_2 8
hpat1 264283 264289 CGG_2 6
-hpat1 264310 264318 AGGG_2 8
-hpat1 264326 264350 AGGG_6 24
-hpat1 264374 264386 AGGG_3 12
+hpat1 264308 264316 GGAG_2 8
+hpat1 264324 264348 GGAG_6 24
+hpat1 264352 264360 GGAG_2 8
+hpat1 264372 264384 GGAG_3 12
+hpat1 264387 264395 GGGA_2 8
hpat1 264407 264413 CGG_2 6
-hpat1 264434 264442 AGGG_2 8
-hpat1 264478 264498 AGGG_5 20
-hpat1 264514 264538 AGGG_6 24
-hpat1 264546 264566 AGGG_5 20
-hpat1 264582 264594 AGGG_3 12
-hpat1 264597 264609 AGGG_3 12
-hpat1 264617 264629 AGGG_3 12
-hpat1 264645 264657 AGGG_3 12
-hpat1 264661 264677 AGGG_4 16
-hpat1 264701 264717 AGGG_4 16
+hpat1 264432 264440 GGAG_2 8
+hpat1 264476 264496 GGAG_5 20
+hpat1 264512 264536 GGAG_6 24
+hpat1 264544 264564 GGAG_5 20
+hpat1 264580 264592 GGAG_3 12
+hpat1 264595 264607 GGAG_3 12
+hpat1 264615 264627 GGAG_3 12
+hpat1 264642 264658 GGGA_4 16
+hpat1 264659 264675 GGAG_4 16
+hpat1 264699 264715 GGAG_4 16
+hpat1 264742 264750 GGGC_2 8
+hpat1 264756 264760 CG_2 4
hpat1 264762 264766 TC_2 4
-hpat1 264781 264790 TGC_3 9
+hpat1 264775 264779 GT_2 4
+hpat1 264780 264789 CTG_3 9
+hpat1 264789 264795 CAG_2 6
+hpat1 264821 264825 TC_2 4
hpat1 264827 264831 TC_2 4
hpat1 264839 264843 TC_2 4
+hpat1 264875 264879 TC_2 4
hpat1 264891 264895 CT_2 4
hpat1 264898 264902 AG_2 4
hpat1 264929 264937 GCGG_2 8
+hpat1 264942 264946 AG_2 4
hpat1 264947 264953 AG_3 6
hpat1 264953 264959 GCG_2 6
hpat1 264961 264965 GC_2 4
-hpat1 265001 265007 GCC_2 6
+hpat1 264980 264984 CC_2 4
+hpat1 264999 265005 CCG_2 6
+hpat1 265005 265009 CC_2 4
+hpat1 265011 265015 CC_2 4
hpat1 265021 265029 CGCC_2 8
+hpat1 265038 265044 CCT_2 6
hpat1 265053 265057 CG_2 4
+hpat1 265074 265078 CC_2 4
hpat1 265085 265089 GC_2 4
hpat1 265107 265111 CT_2 4
hpat1 265130 265134 GT_2 4
-hpat1 265138 265144 ATC_2 6
+hpat1 265137 265143 CAT_2 6
hpat1 265145 265149 CA_2 4
+hpat1 265176 265182 TGG_2 6
hpat1 265183 265187 GT_2 4
hpat1 265198 265204 CAA_2 6
hpat1 265204 265210 AT_3 6
hpat1 265220 265228 TAAA_2 8
hpat1 265230 265234 TG_2 4
hpat1 265239 265243 AT_2 4
-hpat1 265268 265272 TA_2 4
+hpat1 265251 265255 TC_2 4
+hpat1 265267 265271 AT_2 4
+hpat1 265274 265280 AAT_2 6
+hpat1 265289 265297 CGGG_2 8
hpat1 265309 265313 TA_2 4
+hpat1 265357 265361 AG_2 4
hpat1 265364 265368 GA_2 4
+hpat1 265391 265395 CC_2 4
hpat1 265396 265400 TC_2 4
+hpat1 265404 265408 AA_2 4
+hpat1 265412 265416 AA_2 4
hpat1 265427 265433 GTG_2 6
hpat1 265433 265437 GC_2 4
+hpat1 265458 265462 GG_2 4
hpat1 265514 265518 GA_2 4
+hpat1 265520 265524 GC_2 4
hpat1 265529 265533 CT_2 4
hpat1 265547 265551 AG_2 4
-hpat1 265568 265586 TAA_6 18
+hpat1 265566 265584 AAT_6 18
+hpat1 265589 265593 CC_2 4
hpat1 265593 265601 AGGT_2 8
+hpat1 265602 265608 AAG_2 6
hpat1 265613 265617 AG_2 4
+hpat1 265631 265637 GGA_2 6
+hpat1 265643 265647 GG_2 4
+hpat1 265651 265655 AA_2 4
+hpat1 265657 265663 GAT_2 6
+hpat1 265687 265691 CG_2 4
hpat1 265704 265708 CT_2 4
hpat1 265713 265719 CA_3 6
+hpat1 265723 265727 CC_2 4
+hpat1 265737 265743 AGG_2 6
hpat1 265773 265777 AC_2 4
-hpat1 265804 265819 CAA_5 15
+hpat1 265778 265784 CAG_2 6
+hpat1 265790 265794 AA_2 4
+hpat1 265802 265817 AAC_5 15
+hpat1 265826 265830 CC_2 4
hpat1 265837 265841 AC_2 4
+hpat1 265842 265848 CAG_2 6
+hpat1 265854 265858 AA_2 4
hpat1 265865 265877 TAACAA_2 12
hpat1 265877 265883 CAA_2 6
+hpat1 265890 265894 CC_2 4
hpat1 265901 265905 AC_2 4
-hpat1 265932 265947 CAA_5 15
+hpat1 265906 265912 CAG_2 6
+hpat1 265918 265922 AA_2 4
+hpat1 265930 265945 AAC_5 15
+hpat1 265954 265958 CC_2 4
hpat1 265965 265969 AC_2 4
+hpat1 265970 265976 CAG_2 6
+hpat1 265982 265986 AA_2 4
hpat1 265993 266005 TAACAA_2 12
hpat1 266005 266011 CAA_2 6
+hpat1 266023 266027 CT_2 4
hpat1 266031 266041 GCCAG_2 10
hpat1 266045 266049 TG_2 4
hpat1 266054 266058 CT_2 4
hpat1 266066 266070 CA_2 4
hpat1 266109 266113 CT_2 4
+hpat1 266114 266118 TT_2 4
hpat1 266136 266142 AG_3 6
hpat1 266158 266162 GT_2 4
hpat1 266162 266168 CA_3 6
+hpat1 266171 266177 AAG_2 6
hpat1 266185 266197 CTGGAA_2 12
hpat1 266218 266226 TGTC_2 8
+hpat1 266239 266243 AA_2 4
+hpat1 266261 266265 AA_2 4
hpat1 266318 266324 AC_3 6
-hpat1 266361 266365 GA_2 4
-hpat1 266375 266383 GTTA_2 8
+hpat1 266360 266364 AG_2 4
+hpat1 266374 266382 AGTT_2 8
hpat1 266386 266390 TC_2 4
hpat1 266390 266394 AG_2 4
+hpat1 266394 266400 CCT_2 6
+hpat1 266400 266404 TA_2 4
+hpat1 266435 266439 TT_2 4
hpat1 266439 266443 AG_2 4
+hpat1 266452 266456 AA_2 4
hpat1 266456 266460 TA_2 4
hpat1 266463 266467 GA_2 4
+hpat1 266502 266506 AC_2 4
+hpat1 266523 266529 GGA_2 6
hpat1 266572 266576 GA_2 4
-hpat1 266612 266616 TG_2 4
-hpat1 266616 266622 GTG_2 6
+hpat1 266588 266592 AA_2 4
+hpat1 266599 266603 AA_2 4
+hpat1 266611 266615 GT_2 4
+hpat1 266615 266621 GGT_2 6
hpat1 266623 266627 AC_2 4
+hpat1 266659 266665 GGA_2 6
hpat1 266677 266683 AGA_2 6
-hpat1 266715 266719 AC_2 4
-hpat1 266733 266737 CA_2 4
+hpat1 266710 266716 CCA_2 6
+hpat1 266732 266736 AC_2 4
hpat1 266748 266752 TC_2 4
+hpat1 266753 266757 AA_2 4
hpat1 266758 266778 TAAA_5 20
+hpat1 266783 266787 TT_2 4
+hpat1 266787 266793 AA_3 6
+hpat1 266795 266799 AA_2 4
hpat1 266812 266818 TGG_2 6
hpat1 266818 266822 TG_2 4
hpat1 266826 266830 TA_2 4
@@ -9402,252 +18257,471 @@
hpat1 267013 267019 TAC_2 6
hpat1 267021 267025 TC_2 4
hpat1 267028 267032 CT_2 4
+hpat1 267036 267040 CT_2 4
+hpat1 267041 267045 CC_2 4
+hpat1 267053 267057 AT_2 4
hpat1 267060 267064 CT_2 4
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+hpat1 267105 267109 AA_2 4
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hpat1 267145 267149 AT_2 4
hpat1 267166 267170 TG_2 4
hpat1 267184 267188 TG_2 4
hpat1 267213 267217 GC_2 4
hpat1 267220 267226 GCA_2 6
hpat1 267235 267239 CA_2 4
-hpat1 267249 267253 GA_2 4
+hpat1 267248 267252 AG_2 4
hpat1 267260 267266 TAT_2 6
+hpat1 267277 267281 TA_2 4
hpat1 267289 267295 CAG_2 6
hpat1 267300 267304 CA_2 4
hpat1 267310 267314 CA_2 4
+hpat1 267336 267340 AG_2 4
hpat1 267352 267358 ACT_2 6
hpat1 267372 267376 AG_2 4
hpat1 267383 267389 CAA_2 6
+hpat1 267392 267396 GA_2 4
hpat1 267401 267405 TC_2 4
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hpat1 267438 267442 TA_2 4
+hpat1 267448 267454 ACT_2 6
hpat1 267456 267460 GA_2 4
-hpat1 267526 267530 GC_2 4
+hpat1 267470 267476 GGA_2 6
+hpat1 267525 267529 CG_2 4
hpat1 267543 267547 AC_2 4
hpat1 267550 267554 GA_2 4
hpat1 267559 267563 TC_2 4
hpat1 267573 267577 TG_2 4
hpat1 267613 267619 CA_3 6
hpat1 267623 267627 AG_2 4
+hpat1 267647 267653 CCT_2 6
+hpat1 267655 267665 CCACT_2 10
hpat1 267671 267675 TC_2 4
hpat1 267675 267679 CA_2 4
hpat1 267679 267683 TC_2 4
+hpat1 267689 267693 AA_2 4
+hpat1 267708 267712 TG_2 4
+hpat1 267712 267716 AA_2 4
+hpat1 267723 267727 TC_2 4
hpat1 267748 267754 CAG_2 6
hpat1 267777 267785 CACC_2 8
hpat1 267787 267793 AGC_2 6
hpat1 267793 267797 CT_2 4
-hpat1 267822 267826 AC_2 4
-hpat1 267826 267830 TC_2 4
-hpat1 267868 267872 CT_2 4
+hpat1 267821 267825 CA_2 4
+hpat1 267825 267829 CT_2 4
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+hpat1 267867 267871 TC_2 4
hpat1 267876 267880 CT_2 4
hpat1 267881 267887 ATC_2 6
-hpat1 267902 267906 CT_2 4
+hpat1 267894 267898 AT_2 4
+hpat1 267901 267905 TC_2 4
+hpat1 267905 267911 TTG_2 6
hpat1 267919 267923 TC_2 4
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+hpat1 267945 267949 CC_2 4
hpat1 267956 267960 AG_2 4
hpat1 267962 267966 CA_2 4
hpat1 268002 268006 CA_2 4
hpat1 268016 268024 TCAA_2 8
-hpat1 268043 268051 TGAA_2 8
-hpat1 268060 268064 GA_2 4
+hpat1 268027 268033 TTG_2 6
+hpat1 268041 268049 AATG_2 8
+hpat1 268059 268063 AG_2 4
+hpat1 268075 268085 ACTGG_2 10
hpat1 268092 268096 CA_2 4
+hpat1 268098 268102 TT_2 4
hpat1 268102 268106 AG_2 4
hpat1 268132 268140 ATCA_2 8
+hpat1 268140 268144 AA_2 4
+hpat1 268152 268156 CC_2 4
+hpat1 268170 268174 AA_2 4
hpat1 268202 268206 CA_2 4
hpat1 268208 268212 TA_2 4
+hpat1 268265 268269 GA_2 4
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hpat1 268297 268301 TC_2 4
+hpat1 268313 268319 AA_3 6
hpat1 268329 268338 GTG_3 9
+hpat1 268339 268343 GC_2 4
hpat1 268361 268367 AGG_2 6
-hpat1 268379 268387 ACTC_2 8
+hpat1 268376 268380 GA_2 4
+hpat1 268380 268388 CTCA_2 8
+hpat1 268394 268406 GGAGGT_2 12
hpat1 268417 268421 GA_2 4
hpat1 268459 268463 CT_2 4
hpat1 268464 268468 TC_2 4
-hpat1 268493 268497 GA_2 4
-hpat1 268590 268594 AT_2 4
-hpat1 268609 268613 AT_2 4
+hpat1 268468 268476 AA_4 8
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+hpat1 268484 268488 AA_2 4
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+hpat1 268567 268573 AA_3 6
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+hpat1 268608 268614 TA_3 6
+hpat1 268638 268642 AA_2 4
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hpat1 268650 268656 GAA_2 6
hpat1 268662 268666 TA_2 4
-hpat1 268682 268688 ATA_2 6
+hpat1 268669 268673 TT_2 4
+hpat1 268681 268685 TA_2 4
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hpat1 268708 268716 TATG_2 8
hpat1 268754 268758 GA_2 4
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hpat1 268794 268798 TA_2 4
+hpat1 268805 268813 AATT_2 8
hpat1 268834 268838 TG_2 4
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+hpat1 268863 268871 GCTT_2 8
hpat1 268877 268881 AC_2 4
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+hpat1 268906 268918 TT_6 12
hpat1 268918 268922 GA_2 4
hpat1 268927 268931 TC_2 4
hpat1 268932 268936 CT_2 4
hpat1 268937 268941 TC_2 4
hpat1 268965 268969 TC_2 4
-hpat1 269055 269059 AC_2 4
+hpat1 268982 268986 CT_2 4
+hpat1 269005 269009 GT_2 4
+hpat1 269043 269051 GTGC_2 8
+hpat1 269054 269058 CA_2 4
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+hpat1 269089 269093 GG_2 4
hpat1 269096 269102 CAC_2 6
hpat1 269116 269120 TC_2 4
-hpat1 269190 269194 AC_2 4
+hpat1 269141 269149 CCAC_2 8
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+hpat1 269204 269210 TGC_2 6
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hpat1 269220 269228 ATAA_2 8
hpat1 269239 269243 GT_2 4
hpat1 269251 269257 CAA_2 6
hpat1 269274 269280 ATT_2 6
+hpat1 269291 269295 AA_2 4
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hpat1 269353 269359 TG_3 6
hpat1 269378 269382 TC_2 4
hpat1 269385 269389 GC_2 4
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hpat1 269433 269439 CA_3 6
hpat1 269444 269448 TG_2 4
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hpat1 269489 269493 CA_2 4
-hpat1 269507 269513 ATC_2 6
+hpat1 269506 269512 CAT_2 6
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hpat1 269534 269538 GT_2 4
hpat1 269548 269552 TG_2 4
-hpat1 269622 269626 CT_2 4
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+hpat1 269579 269587 GCAT_2 8
+hpat1 269621 269625 TC_2 4
+hpat1 269630 269636 TTC_2 6
hpat1 269650 269656 CAC_2 6
-hpat1 269705 269711 AG_3 6
+hpat1 269676 269680 AC_2 4
+hpat1 269682 269686 GG_2 4
+hpat1 269704 269710 GA_3 6
hpat1 269761 269765 GA_2 4
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hpat1 269806 269810 TG_2 4
hpat1 269810 269814 AC_2 4
hpat1 269832 269836 CA_2 4
hpat1 269861 269865 CT_2 4
+hpat1 269873 269877 AT_2 4
hpat1 269877 269885 GAGG_2 8
hpat1 269911 269923 ATGGAC_2 12
hpat1 269923 269927 AG_2 4
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hpat1 269954 269958 CT_2 4
-hpat1 269976 269980 GA_2 4
-hpat1 270000 270004 GT_2 4
+hpat1 269975 269981 AG_3 6
+hpat1 269999 270003 TG_2 4
hpat1 270020 270026 GCA_2 6
hpat1 270031 270037 CAG_2 6
hpat1 270044 270048 AG_2 4
-hpat1 270089 270097 TGGC_2 8
+hpat1 270072 270078 CTG_2 6
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hpat1 270166 270170 CT_2 4
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hpat1 270199 270203 TC_2 4
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hpat1 270236 270240 TG_2 4
hpat1 270283 270287 TC_2 4
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hpat1 270306 270310 GA_2 4
hpat1 270315 270321 ATG_2 6
-hpat1 270362 270366 GA_2 4
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hpat1 270396 270402 GTG_2 6
hpat1 270403 270407 GA_2 4
hpat1 270436 270440 AG_2 4
hpat1 270441 270445 CT_2 4
hpat1 270446 270450 TC_2 4
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hpat1 270456 270464 TA_4 8
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hpat1 270504 270510 CTA_2 6
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hpat1 270564 270568 TA_2 4
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hpat1 270598 270602 AG_2 4
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hpat1 270627 270631 TA_2 4
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hpat1 270662 270666 AT_2 4
hpat1 270678 270682 AC_2 4
hpat1 270689 270695 GTT_2 6
hpat1 270696 270700 CT_2 4
hpat1 270715 270719 GA_2 4
-hpat1 270728 270734 ACA_2 6
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hpat1 270745 270749 CA_2 4
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hpat1 270776 270780 TC_2 4
-hpat1 270787 270791 CT_2 4
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hpat1 270797 270801 TG_2 4
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hpat1 270836 270840 AT_2 4
hpat1 270840 270844 TC_2 4
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hpat1 270914 270918 CT_2 4
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hpat1 270977 270981 TC_2 4
hpat1 271007 271011 GA_2 4
-hpat1 271032 271038 GAT_2 6
-hpat1 271054 271058 GT_2 4
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hpat1 271077 271083 TA_3 6
-hpat1 271103 271107 TA_2 4
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hpat1 271107 271111 AG_2 4
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hpat1 271154 271158 GT_2 4
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hpat1 271170 271182 GATTTA_2 12
hpat1 271198 271202 AC_2 4
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hpat1 271240 271244 GA_2 4
hpat1 271244 271248 TC_2 4
-hpat1 271362 271366 AG_2 4
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hpat1 271480 271484 AT_2 4
hpat1 271503 271507 AT_2 4
-hpat1 271562 271574 GAAAAT_2 12
+hpat1 271533 271537 TT_2 4
+hpat1 271561 271573 TGAAAA_2 12
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hpat1 271594 271598 TG_2 4
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hpat1 271651 271655 GT_2 4
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hpat1 271725 271733 ATTT_2 8
hpat1 271735 271741 ATT_2 6
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hpat1 271802 271806 CA_2 4
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hpat1 271840 271846 GTG_2 6
hpat1 271886 271890 TG_2 4
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hpat1 271944 271948 TC_2 4
-hpat1 271974 271978 TG_2 4
-hpat1 271978 271984 GTG_2 6
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hpat1 272063 272067 GA_2 4
hpat1 272068 272072 CA_2 4
-hpat1 272095 272101 GA_3 6
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hpat1 272102 272116 AG_7 14
hpat1 272117 272121 CT_2 4
-hpat1 272145 272149 AG_2 4
-hpat1 272149 272153 GA_2 4
-hpat1 272155 272159 AG_2 4
-hpat1 272177 272181 AG_2 4
-hpat1 272181 272193 GAAAAG_2 12
-hpat1 272198 272210 GAAAAA_2 12
+hpat1 272126 272132 AA_3 6
+hpat1 272132 272142 AGGAA_2 10
+hpat1 272142 272157 AGGAG_3 15
+hpat1 272157 272167 AGGGG_2 10
+hpat1 272168 272176 AGGG_2 8
+hpat1 272176 272180 GA_2 4
+hpat1 272180 272192 GGAAAA_2 12
+hpat1 272192 272210 GAAAAA_3 18
hpat1 272210 272220 GAAAG_2 10
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hpat1 272230 272234 AG_2 4
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hpat1 272300 272304 CA_2 4
hpat1 272310 272314 AT_2 4
hpat1 272333 272337 AT_2 4
-hpat1 272385 272389 AC_2 4
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hpat1 272416 272420 CA_2 4
hpat1 272421 272425 CT_2 4
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hpat1 272453 272457 CT_2 4
hpat1 272464 272468 TA_2 4
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hpat1 272518 272522 TG_2 4
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hpat1 272570 272576 GTT_2 6
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hpat1 272610 272614 TA_2 4
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hpat1 272632 272636 AC_2 4
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hpat1 272723 272727 CA_2 4
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hpat1 272738 272742 GT_2 4
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hpat1 272787 272793 CTG_2 6
hpat1 272822 272828 TGT_2 6
-hpat1 272839 272843 AC_2 4
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hpat1 272851 272857 AG_3 6
hpat1 272861 272867 CAT_2 6
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hpat1 272888 272892 GC_2 4
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hpat1 272972 272976 AT_2 4
hpat1 272981 272985 TG_2 4
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hpat1 273034 273038 TG_2 4
hpat1 273053 273057 TA_2 4
hpat1 273074 273078 TC_2 4
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+hpat1 273128 273132 TT_2 4
hpat1 273143 273149 AT_3 6
hpat1 273155 273161 TAG_2 6
+hpat1 273187 273191 AT_2 4
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hpat1 273203 273207 TA_2 4
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hpat1 273220 273226 TCC_2 6
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hpat1 273259 273263 CT_2 4
hpat1 273267 273271 TA_2 4
hpat1 273315 273319 CA_2 4
hpat1 273324 273328 GA_2 4
hpat1 273336 273340 TC_2 4
+hpat1 273344 273348 AA_2 4
+hpat1 273352 273356 AA_2 4
hpat1 273368 273374 TGG_2 6
hpat1 273374 273378 CA_2 4
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hpat1 273438 273442 AG_2 4
hpat1 273455 273459 GA_2 4
hpat1 273462 273468 CAC_2 6
hpat1 273472 273476 CT_2 4
hpat1 273484 273490 CAA_2 6
hpat1 273493 273497 GA_2 4
+hpat1 273502 273506 TC_2 4
hpat1 273542 273546 CA_2 4
-hpat1 273612 273616 TG_2 4
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+hpat1 273585 273589 TT_2 4
+hpat1 273591 273595 TT_2 4
+hpat1 273606 273610 TT_2 4
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hpat1 273627 273631 CT_2 4
-hpat1 273660 273664 CT_2 4
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hpat1 273693 273697 CA_2 4
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hpat1 273713 273723 TATTT_2 10
-hpat1 273742 273746 AT_2 4
+hpat1 273737 273741 TT_2 4
+hpat1 273741 273745 TA_2 4
hpat1 273748 273754 GTT_2 6
-hpat1 273763 273771 CTTT_2 8
-hpat1 273773 273797 CTTTTT_4 24
+hpat1 273760 273768 TTTC_2 8
+hpat1 273768 273772 TT_2 4
+hpat1 273772 273796 TCTTTT_4 24
+hpat1 273796 273814 TT_9 18
+hpat1 273823 273827 GT_2 4
hpat1 273839 273843 GC_2 4
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+hpat1 273909 273913 AT_2 4
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hpat1 273947 273951 GT_2 4
hpat1 273956 273960 GT_2 4
+hpat1 273961 273967 CAG_2 6
+hpat1 273991 273997 TGG_2 6
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+hpat1 274037 274041 GG_2 4
hpat1 274047 274053 TCT_2 6
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hpat1 274067 274073 AGA_2 6
hpat1 274078 274082 CT_2 4
hpat1 274084 274094 CT_5 10
@@ -9655,86 +18729,154 @@
hpat1 274108 274112 AG_2 4
hpat1 274137 274141 GT_2 4
hpat1 274154 274160 TCA_2 6
+hpat1 274161 274165 CT_2 4
hpat1 274173 274183 CTCCC_2 10
+hpat1 274187 274195 CCTA_2 8
hpat1 274202 274206 AG_2 4
hpat1 274208 274214 TGG_2 6
hpat1 274214 274226 GAGCCT_2 12
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hpat1 274265 274269 GA_2 4
hpat1 274291 274295 CT_2 4
hpat1 274299 274303 TC_2 4
hpat1 274308 274312 TG_2 4
hpat1 274317 274321 GT_2 4
+hpat1 274325 274329 CA_2 4
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hpat1 274356 274360 AG_2 4
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hpat1 274396 274400 TA_2 4
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hpat1 274500 274504 GT_2 4
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hpat1 274512 274516 CA_2 4
hpat1 274519 274523 GA_2 4
hpat1 274535 274541 AG_3 6
hpat1 274541 274549 ATGA_2 8
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hpat1 274571 274575 AG_2 4
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hpat1 274596 274608 GCCTGA_2 12
-hpat1 274647 274651 TG_2 4
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hpat1 274653 274657 AG_2 4
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hpat1 274744 274748 AG_2 4
hpat1 274752 274756 TG_2 4
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hpat1 274849 274861 TGTTCT_2 12
hpat1 274861 274867 CT_3 6
-hpat1 274902 274908 AGA_2 6
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hpat1 274971 274975 TG_2 4
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hpat1 275012 275016 TG_2 4
hpat1 275024 275028 GA_2 4
hpat1 275028 275032 TA_2 4
hpat1 275038 275042 TA_2 4
-hpat1 275093 275097 TA_2 4
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hpat1 275098 275104 GTG_2 6
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hpat1 275127 275131 CT_2 4
hpat1 275137 275141 TC_2 4
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hpat1 275245 275249 AG_2 4
hpat1 275274 275280 CTG_2 6
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hpat1 275303 275307 TA_2 4
hpat1 275315 275319 CA_2 4
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hpat1 275343 275347 CT_2 4
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hpat1 275358 275362 AT_2 4
hpat1 275363 275367 TG_2 4
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hpat1 275427 275436 TAA_3 9
hpat1 275446 275450 TG_2 4
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hpat1 275468 275474 GA_3 6
hpat1 275487 275491 TG_2 4
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hpat1 275530 275538 CAGC_2 8
hpat1 275552 275556 CA_2 4
hpat1 275563 275567 TG_2 4
hpat1 275580 275584 TG_2 4
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hpat1 275632 275636 AG_2 4
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hpat1 275694 275698 GA_2 4
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hpat1 275724 275728 CT_2 4
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hpat1 275743 275747 GT_2 4
hpat1 275772 275776 TC_2 4
hpat1 275781 275785 TA_2 4
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hpat1 275807 275811 GA_2 4
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hpat1 275913 275917 AG_2 4
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hpat1 275978 275986 AGCA_2 8
hpat1 276008 276012 TC_2 4
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hpat1 276075 276079 TG_2 4
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hpat1 276086 276090 AG_2 4
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hpat1 276100 276106 AGA_2 6
hpat1 276119 276129 CGAGG_2 10
hpat1 276137 276143 GCG_2 6
-hpat1 276146 276150 TG_2 4
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hpat1 276225 276229 GC_2 4
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hpat1 276261 276265 TG_2 4
hpat1 276274 276280 TCT_2 6
hpat1 276282 276286 TA_2 4
hpat1 276286 276292 ACT_2 6
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hpat1 276312 276316 TC_2 4
hpat1 276317 276321 GT_2 4
hpat1 276325 276331 CG_3 6
@@ -9744,20 +18886,40 @@
hpat1 276397 276401 CG_2 4
hpat1 276402 276408 CGC_2 6
hpat1 276415 276419 GC_2 4
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hpat1 276491 276495 CT_2 4
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hpat1 276515 276519 AT_2 4
hpat1 276520 276524 AT_2 4
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hpat1 276531 276535 CT_2 4
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hpat1 276569 276573 CT_2 4
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hpat1 276641 276647 CAT_2 6
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hpat1 276681 276685 TA_2 4
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hpat1 276751 276755 AT_2 4
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hpat1 276792 276796 CT_2 4
hpat1 276803 276809 ATC_2 6
hpat1 276811 276815 TA_2 4
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hpat1 276864 276868 AC_2 4
hpat1 276880 276884 AT_2 4
hpat1 276890 276894 GA_2 4
@@ -9765,43 +18927,77 @@
hpat1 276991 276995 AG_2 4
hpat1 277005 277009 TC_2 4
hpat1 277009 277021 TAAA_3 12
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hpat1 277079 277085 AG_3 6
hpat1 277094 277098 CT_2 4
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hpat1 277162 277168 CAT_2 6
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hpat1 277209 277215 TCC_2 6
hpat1 277232 277238 GCA_2 6
hpat1 277242 277246 AC_2 4
hpat1 277255 277263 CTCC_2 8
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hpat1 277300 277304 CT_2 4
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hpat1 277330 277334 TC_2 4
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hpat1 277350 277356 TCT_2 6
hpat1 277368 277374 GTA_2 6
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hpat1 277408 277412 TC_2 4
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hpat1 277457 277461 TC_2 4
hpat1 277463 277469 TCC_2 6
hpat1 277496 277504 CTGC_2 8
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hpat1 277523 277527 CT_2 4
hpat1 277529 277533 TG_2 4
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hpat1 277577 277583 TC_3 6
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hpat1 277606 277610 TC_2 4
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hpat1 277654 277658 TA_2 4
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hpat1 277678 277692 AC_7 14
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hpat1 277743 277747 AC_2 4
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hpat1 277760 277766 AC_3 6
hpat1 277775 277783 TAGA_2 8
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hpat1 277797 277801 GA_2 4
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hpat1 277873 277877 TA_2 4
hpat1 277889 277893 AG_2 4
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hpat1 277921 277925 CA_2 4
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hpat1 277931 277935 TG_2 4
hpat1 277946 277950 TG_2 4
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hpat1 277995 277999 CT_2 4
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hpat1 278028 278032 AG_2 4
hpat1 278045 278049 TG_2 4
hpat1 278067 278071 AG_2 4
@@ -9809,909 +19005,1663 @@
hpat1 278077 278081 AT_2 4
hpat1 278088 278092 CT_2 4
hpat1 278102 278106 CT_2 4
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hpat1 278167 278171 TC_2 4
hpat1 278219 278223 GA_2 4
hpat1 278237 278243 ATG_2 6
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hpat1 278251 278255 TC_2 4
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hpat1 278286 278292 GTG_2 6
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hpat1 278402 278408 ACA_2 6
hpat1 278422 278426 TC_2 4
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hpat1 278554 278562 AGGC_2 8
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hpat1 278649 278653 AG_2 4
hpat1 278669 278675 ATG_2 6
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hpat1 278699 278703 GA_2 4
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hpat1 278737 278741 CA_2 4
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hpat1 278779 278785 CTG_2 6
hpat1 278797 278801 AT_2 4
hpat1 278802 278808 TG_3 6
hpat1 278821 278825 CG_2 4
hpat1 278829 278833 TG_2 4
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hpat1 278853 278857 AT_2 4
hpat1 278869 278875 AG_3 6
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hpat1 278916 278926 ATTAA_2 10
hpat1 278941 278945 CA_2 4
hpat1 278951 278955 TG_2 4
hpat1 279014 279018 GA_2 4
hpat1 279037 279041 GA_2 4
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hpat1 279046 279050 TC_2 4
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hpat1 279082 279086 TG_2 4
hpat1 279086 279092 ATG_2 6
hpat1 279103 279107 TC_2 4
hpat1 279122 279126 TG_2 4
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hpat1 279155 279159 GA_2 4
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hpat1 279204 279208 AG_2 4
hpat1 279218 279222 TC_2 4
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hpat1 279273 279277 GA_2 4
hpat1 279290 279294 CA_2 4
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hpat1 279394 279402 TGGG_2 8
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hpat1 279429 279437 ACCT_2 8
hpat1 279444 279452 CTGC_2 8
hpat1 279462 279468 GCT_2 6
hpat1 279468 279474 TCA_2 6
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hpat1 279500 279504 GA_2 4
hpat1 279514 279518 GA_2 4
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hpat1 279594 279600 TCA_2 6
hpat1 279620 279624 AC_2 4
hpat1 279629 279633 GA_2 4
hpat1 279639 279643 TG_2 4
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hpat1 279707 279711 GA_2 4
hpat1 279712 279716 AG_2 4
hpat1 279721 279725 CT_2 4
hpat1 279763 279769 CAC_2 6
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hpat1 279837 279841 GC_2 4
hpat1 279841 279847 CAC_2 6
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hpat1 279873 279877 GA_2 4
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hpat1 279905 279909 TC_2 4
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hpat1 280034 280040 TGC_2 6
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hpat1 280060 280064 CA_2 4
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hpat1 280141 280145 AC_2 4
hpat1 280163 280167 TG_2 4
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hpat1 280237 280241 CA_2 4
hpat1 280241 280245 TG_2 4
hpat1 280255 280259 TG_2 4
hpat1 280261 280265 AG_2 4
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hpat1 280312 280316 CT_2 4
hpat1 280336 280340 GA_2 4
hpat1 280355 280363 GCAG_2 8
hpat1 280363 280367 TC_2 4
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hpat1 280390 280394 TG_2 4
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hpat1 280410 280414 TG_2 4
hpat1 280414 280418 CA_2 4
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hpat1 280442 280448 TGT_2 6
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hpat1 280487 280491 TA_2 4
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hpat1 280524 280530 ATC_2 6
hpat1 280532 280536 CA_2 4
hpat1 280543 280547 AG_2 4
hpat1 280550 280556 CT_3 6
hpat1 280585 280589 CT_2 4
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hpat1 280628 280634 TAA_2 6
hpat1 280634 280638 TC_2 4
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hpat1 280686 280690 AC_2 4
hpat1 280706 280712 ACA_2 6
hpat1 280712 280718 GAA_2 6
hpat1 280719 280723 AT_2 4
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hpat1 280782 280790 ACAG_2 8
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hpat1 280843 280847 GA_2 4
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hpat1 281999 282003 TA_2 4
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hpat1 284277 284283 AGG_2 6
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hpat1 302700 302706 AC_3 6
hpat1 302717 302723 TGG_2 6
hpat1 302725 302729 CA_2 4
hpat1 302754 302758 TG_2 4
+hpat1 302763 302767 AA_2 4
hpat1 302810 302814 GA_2 4
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hpat1 302846 302854 AGCC_2 8
hpat1 302855 302861 TGG_2 6
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hpat1 302899 302905 AGG_2 6
hpat1 302949 302955 CAC_2 6
hpat1 302975 302979 AG_2 4
hpat1 302989 302993 TC_2 4
-hpat1 303005 303009 AC_2 4
+hpat1 302994 303002 AA_4 8
+hpat1 303004 303010 CA_3 6
hpat1 303028 303032 CA_2 4
hpat1 303034 303040 CAA_2 6
hpat1 303041 303045 GA_2 4
@@ -10719,195 +20669,363 @@
hpat1 303070 303074 TA_2 4
hpat1 303077 303081 GA_2 4
hpat1 303082 303086 AG_2 4
+hpat1 303087 303091 GA_2 4
hpat1 303106 303112 AG_3 6
-hpat1 303127 303131 TC_2 4
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hpat1 303180 303184 TG_2 4
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hpat1 303223 303231 ATGA_2 8
hpat1 303254 303260 TGT_2 6
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hpat1 303285 303295 TCTGT_2 10
hpat1 303295 303299 TA_2 4
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hpat1 303307 303311 TC_2 4
hpat1 303311 303315 TG_2 4
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hpat1 303394 303402 AGGC_2 8
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hpat1 303423 303427 GA_2 4
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hpat1 303455 303459 TC_2 4
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hpat1 303533 303537 CA_2 4
hpat1 303541 303547 GAG_2 6
hpat1 303550 303554 GA_2 4
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hpat1 303582 303586 CT_2 4
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hpat1 303621 303627 TGG_2 6
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hpat1 303660 303664 GA_2 4
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hpat1 303691 303695 AG_2 4
hpat1 303746 303750 GA_2 4
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hpat1 303790 303794 GC_2 4
hpat1 303794 303798 AC_2 4
hpat1 303816 303822 AGG_2 6
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hpat1 303848 303854 AGG_2 6
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hpat1 303878 303882 GC_2 4
hpat1 303904 303908 AG_2 4
hpat1 303909 303913 GA_2 4
hpat1 303918 303922 TC_2 4
hpat1 303922 303930 TAAA_2 8
-hpat1 303944 303952 CATA_2 8
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hpat1 303969 303973 AT_2 4
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hpat1 304114 304120 TAA_2 6
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hpat1 304140 304146 GTG_2 6
hpat1 304204 304210 AGG_2 6
hpat1 304211 304215 AG_2 4
hpat1 304228 304232 GA_2 4
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hpat1 304333 304337 GA_2 4
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hpat1 304364 304368 GA_2 4
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hpat1 304397 304401 AT_2 4
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hpat1 304770 304776 TGG_2 6
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hpat1 304855 304859 AT_2 4
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hpat1 304905 304911 GTG_2 6
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hpat1 304973 304977 AG_2 4
hpat1 304995 304999 CG_2 4
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hpat1 305301 305307 GTG_2 6
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hpat1 305333 305339 AGG_2 6
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hpat1 305389 305393 GA_2 4
hpat1 305421 305425 AG_2 4
hpat1 305426 305430 GA_2 4
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hpat1 305479 305487 AT_4 8
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hpat1 306652 306656 AT_2 4
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hpat1 306721 306727 AGG_2 6
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hpat1 307009 307013 GA_2 4
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hpat1 307298 307310 CAGCTC_2 12
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hpat1 307802 307806 GC_2 4
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hpat1 308109 308113 AC_2 4
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hpat1 308233 308239 CTG_2 6
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hpat1 308277 308281 CA_2 4
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hpat1 308328 308334 GTT_2 6
hpat1 308336 308344 AGAA_2 8
hpat1 308345 308351 CA_3 6
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hpat1 308405 308411 TCT_2 6
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hpat1 308431 308437 TCT_2 6
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hpat1 308462 308466 AC_2 4
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hpat1 308534 308538 AG_2 4
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hpat1 308575 308583 TGTT_2 8
hpat1 308587 308607 TATT_5 20
hpat1 308609 308613 GA_2 4
@@ -10917,208 +21035,416 @@
hpat1 308685 308691 TCC_2 6
hpat1 308720 308728 CAGG_2 8
hpat1 308728 308734 CAC_2 6
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hpat1 308766 308770 AG_2 4
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hpat1 308872 308876 TG_2 4
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hpat1 308899 308907 ATGC_2 8
hpat1 308907 308915 ATGG_2 8
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hpat1 308948 308954 GCA_2 6
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hpat1 308960 308966 CTG_2 6
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hpat1 309048 309060 AGC_4 12
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hpat1 309120 309126 CA_3 6
hpat1 309131 309141 TAAAA_2 10
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hpat1 309164 309168 GT_2 4
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hpat1 309241 309245 AG_2 4
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hpat1 309364 309368 TC_2 4
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hpat1 309445 309449 TC_2 4
hpat1 309472 309476 CG_2 4
hpat1 309492 309498 ATT_2 6
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hpat1 309511 309515 AG_2 4
hpat1 309528 309532 AT_2 4
hpat1 309544 309548 TC_2 4
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hpat1 309666 309670 TG_2 4
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hpat1 309988 309992 GC_2 4
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hpat1 310199 310203 GC_2 4
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hpat1 310224 310230 ACG_2 6
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hpat1 310258 310262 CA_2 4
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hpat1 310305 310311 GC_3 6
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+hpat1 310401 310409 TGGG_2 8
hpat1 310413 310417 CG_2 4
+hpat1 310443 310447 GG_2 4
+hpat1 310448 310452 GG_2 4
+hpat1 310467 310471 GC_2 4
+hpat1 310502 310506 TG_2 4
+hpat1 310506 310510 AA_2 4
+hpat1 310538 310546 TGGC_2 8
+hpat1 310556 310560 CC_2 4
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hpat1 310584 310588 AG_2 4
+hpat1 310599 310603 CG_2 4
+hpat1 310610 310620 GAATC_2 10
hpat1 310629 310633 GT_2 4
hpat1 310661 310667 CAT_2 6
hpat1 310673 310677 AT_2 4
-hpat1 310683 310691 CTCC_2 8
+hpat1 310682 310686 TC_2 4
hpat1 310713 310717 GA_2 4
-hpat1 310722 310726 TA_2 4
+hpat1 310721 310725 AT_2 4
hpat1 310727 310735 AT_4 8
hpat1 310735 310739 GA_2 4
+hpat1 310761 310765 AA_2 4
hpat1 310780 310784 AT_2 4
hpat1 310796 310802 TG_3 6
hpat1 310802 310808 TAG_2 6
-hpat1 310882 310886 CT_2 4
-hpat1 310952 310956 TC_2 4
+hpat1 310810 310816 GG_3 6
+hpat1 310842 310846 CC_2 4
+hpat1 310848 310854 AAG_2 6
+hpat1 310871 310877 CC_3 6
+hpat1 310881 310885 TC_2 4
+hpat1 310900 310904 AA_2 4
+hpat1 310916 310920 AG_2 4
+hpat1 310949 310953 GT_2 4
+hpat1 310966 310970 AA_2 4
+hpat1 310973 310977 AA_2 4
hpat1 310982 310986 CG_2 4
hpat1 311025 311029 CG_2 4
+hpat1 311030 311034 CC_2 4
+hpat1 311040 311046 TCC_2 6
+hpat1 311048 311052 CC_2 4
+hpat1 311058 311068 AAGAA_2 10
hpat1 311073 311077 TC_2 4
hpat1 311082 311086 TC_2 4
-hpat1 311102 311106 GA_2 4
+hpat1 311086 311090 CC_2 4
+hpat1 311099 311103 CG_2 4
+hpat1 311114 311118 CC_2 4
hpat1 311127 311137 GCCCC_2 10
-hpat1 311177 311181 CT_2 4
+hpat1 311141 311147 CGG_2 6
+hpat1 311158 311162 GA_2 4
+hpat1 311176 311180 TC_2 4
hpat1 311197 311201 CG_2 4
hpat1 311201 311205 GC_2 4
hpat1 311209 311213 GC_2 4
+hpat1 311218 311222 GG_2 4
+hpat1 311250 311254 GT_2 4
hpat1 311256 311260 AC_2 4
+hpat1 311260 311264 GG_2 4
+hpat1 311267 311271 CC_2 4
hpat1 311271 311279 GC_4 8
hpat1 311299 311311 GAGGGG_2 12
hpat1 311315 311323 GC_4 8
hpat1 311323 311329 CGG_2 6
-hpat1 311333 311337 GC_2 4
+hpat1 311332 311338 CG_3 6
+hpat1 311340 311344 GA_2 4
hpat1 311347 311351 AC_2 4
hpat1 311361 311367 CGG_2 6
+hpat1 311368 311376 CGGG_2 8
hpat1 311378 311384 GCG_2 6
hpat1 311384 311390 CG_3 6
-hpat1 311394 311400 GCG_2 6
+hpat1 311393 311397 CG_2 4
hpat1 311405 311409 AG_2 4
+hpat1 311418 311422 AG_2 4
+hpat1 311424 311428 CG_2 4
+hpat1 311428 311432 GG_2 4
+hpat1 311454 311458 CC_2 4
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hpat1 311468 311474 TG_3 6
-hpat1 311503 311509 CGG_2 6
-hpat1 311512 311516 CG_2 4
+hpat1 311475 311479 TG_2 4
+hpat1 311501 311507 GGC_2 6
+hpat1 311507 311511 GG_2 4
+hpat1 311511 311517 GC_3 6
hpat1 311528 311532 GA_2 4
-hpat1 311534 311538 GC_2 4
+hpat1 311533 311537 CG_2 4
+hpat1 311544 311548 TC_2 4
+hpat1 311548 311552 CC_2 4
+hpat1 311554 311562 CCGT_2 8
hpat1 311571 311575 GC_2 4
hpat1 311579 311585 CTC_2 6
+hpat1 311588 311592 CC_2 4
hpat1 311596 311600 CG_2 4
-hpat1 311616 311626 GCGGG_2 10
-hpat1 311626 311632 GCC_2 6
+hpat1 311600 311604 GG_2 4
+hpat1 311615 311619 CG_2 4
+hpat1 311623 311627 GG_2 4
+hpat1 311630 311634 CC_2 4
hpat1 311639 311645 CGC_2 6
-hpat1 311649 311655 TCC_2 6
-hpat1 311718 311722 CG_2 4
+hpat1 311647 311653 CCT_2 6
+hpat1 311653 311657 CC_2 4
+hpat1 311659 311663 CC_2 4
+hpat1 311667 311671 CG_2 4
+hpat1 311685 311689 CC_2 4
+hpat1 311689 311695 CGG_2 6
+hpat1 311705 311709 CC_2 4
+hpat1 311717 311721 GC_2 4
hpat1 311727 311733 GCA_2 6
+hpat1 311735 311739 GG_2 4
hpat1 311739 311743 CG_2 4
hpat1 311757 311763 CGG_2 6
hpat1 311763 311772 GCC_3 9
+hpat1 311783 311791 GGCC_2 8
hpat1 311791 311797 GAG_2 6
+hpat1 311797 311801 GG_2 4
hpat1 311801 311807 CG_3 6
-hpat1 311867 311871 TG_2 4
+hpat1 311825 311829 CC_2 4
+hpat1 311836 311840 CA_2 4
+hpat1 311843 311847 AG_2 4
+hpat1 311866 311870 GT_2 4
hpat1 311874 311880 GCA_2 6
hpat1 311884 311890 CGG_2 6
hpat1 311917 311921 CA_2 4
hpat1 311926 311930 GA_2 4
hpat1 311930 311934 TC_2 4
hpat1 311937 311941 GC_2 4
+hpat1 311945 311951 GCC_2 6
hpat1 311958 311964 GCT_2 6
-hpat1 311975 311981 AGA_2 6
+hpat1 311974 311978 GA_2 4
hpat1 312003 312015 GCGGCT_2 12
hpat1 312019 312023 CA_2 4
-hpat1 312054 312058 GC_2 4
-hpat1 312074 312082 CGCC_2 8
-hpat1 312086 312090 CG_2 4
+hpat1 312053 312057 CG_2 4
+hpat1 312058 312062 AA_2 4
+hpat1 312062 312066 AG_2 4
+hpat1 312069 312073 GG_2 4
+hpat1 312073 312077 GC_2 4
+hpat1 312085 312089 GC_2 4
hpat1 312090 312100 GCCCC_2 10
+hpat1 312103 312109 GGT_2 6
+hpat1 312115 312121 GGC_2 6
+hpat1 312154 312158 CG_2 4
+hpat1 312158 312162 GG_2 4
+hpat1 312162 312168 CCG_2 6
hpat1 312168 312174 AGC_2 6
+hpat1 312186 312192 GG_3 6
+hpat1 312193 312197 GG_2 4
hpat1 312197 312203 CGG_2 6
-hpat1 312212 312218 ACG_2 6
+hpat1 312211 312217 GAC_2 6
hpat1 312223 312232 GAC_3 9
hpat1 312232 312238 GAG_2 6
hpat1 312238 312244 CTG_2 6
hpat1 312249 312253 GC_2 4
hpat1 312259 312263 GA_2 4
+hpat1 312263 312267 CC_2 4
+hpat1 312267 312271 GG_2 4
hpat1 312278 312282 TG_2 4
+hpat1 312293 312299 CGG_2 6
+hpat1 312311 312315 GG_2 4
hpat1 312324 312330 GC_3 6
-hpat1 312358 312373 GCC_5 15
+hpat1 312348 312352 GG_2 4
+hpat1 312355 312373 GCC_6 18
+hpat1 312374 312378 CC_2 4
hpat1 312379 312383 AC_2 4
+hpat1 312387 312393 GGA_2 6
hpat1 312394 312400 GAG_2 6
-hpat1 312409 312421 GAG_4 12
-hpat1 312445 312451 GAG_2 6
+hpat1 312402 312408 GGA_2 6
+hpat1 312408 312412 AG_2 4
+hpat1 312412 312421 GAG_3 9
+hpat1 312444 312448 AG_2 4
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+hpat1 312466 312472 GAG_2 6
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hpat1 312524 312528 GC_2 4
hpat1 312535 312539 CG_2 4
+hpat1 312553 312561 CCTC_2 8
hpat1 312587 312593 ACT_2 6
+hpat1 312596 312600 CC_2 4
hpat1 312610 312614 GA_2 4
hpat1 312618 312622 CG_2 4
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+hpat1 312630 312634 GC_2 4
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+hpat1 312683 312687 GG_2 4
hpat1 312687 312691 CG_2 4
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+hpat1 312712 312720 TACA_2 8
+hpat1 312733 312737 GG_2 4
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hpat1 312765 312769 TC_2 4
-hpat1 312771 312775 GC_2 4
+hpat1 312770 312774 CG_2 4
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+hpat1 312802 312808 CC_3 6
+hpat1 312823 312827 CC_2 4
+hpat1 312828 312832 CC_2 4
hpat1 312837 312843 AC_3 6
+hpat1 312857 312867 ACCCC_2 10
+hpat1 312869 312873 CC_2 4
hpat1 312874 312878 AC_2 4
+hpat1 312883 312887 CC_2 4
+hpat1 312888 312892 CC_2 4
+hpat1 312898 312902 CC_2 4
hpat1 312908 312912 CA_2 4
-hpat1 312918 312924 AGC_2 6
+hpat1 312913 312919 CCA_2 6
+hpat1 312920 312928 CAGC_2 8
+hpat1 312928 312932 CC_2 4
hpat1 312938 312942 AC_2 4
-hpat1 312951 312955 TC_2 4
+hpat1 312950 312954 CT_2 4
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hpat1 312984 312988 CA_2 4
+hpat1 312990 312994 CC_2 4
+hpat1 313005 313011 GGA_2 6
+hpat1 313015 313019 CC_2 4
hpat1 313035 313041 TC_3 6
hpat1 313048 313058 GCCCG_2 10
-hpat1 313062 313066 CT_2 4
-hpat1 313101 313105 CG_2 4
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+hpat1 313072 313078 GG_3 6
+hpat1 313096 313104 ACGC_2 8
+hpat1 313105 313111 CCT_2 6
hpat1 313111 313115 GC_2 4
-hpat1 313118 313128 TCCCT_2 10
+hpat1 313115 313123 CCCT_2 8
+hpat1 313128 313134 GG_3 6
+hpat1 313135 313139 GG_2 4
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hpat1 313160 313164 GC_2 4
+hpat1 313168 313176 GCCC_2 8
+hpat1 313183 313187 GG_2 4
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hpat1 313201 313205 GC_2 4
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hpat1 313224 313230 AGG_2 6
hpat1 313253 313257 CT_2 4
+hpat1 313272 313276 AA_2 4
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hpat1 313286 313290 GT_2 4
hpat1 313290 313294 AG_2 4
-hpat1 313335 313339 TC_2 4
+hpat1 313334 313338 CT_2 4
+hpat1 313347 313351 GG_2 4
+hpat1 313367 313373 GGA_2 6
+hpat1 313384 313392 GGTT_2 8
hpat1 313403 313407 CT_2 4
+hpat1 313421 313425 CC_2 4
+hpat1 313425 313429 TT_2 4
+hpat1 313436 313440 GG_2 4
hpat1 313440 313444 TC_2 4
hpat1 313446 313450 AC_2 4
hpat1 313453 313457 CG_2 4
hpat1 313457 313463 CAC_2 6
hpat1 313463 313467 CT_2 4
hpat1 313472 313476 CG_2 4
-hpat1 313497 313501 TA_2 4
+hpat1 313483 313487 CT_2 4
+hpat1 313491 313499 CCTA_2 8
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hpat1 313529 313533 GA_2 4
-hpat1 313545 313549 CT_2 4
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+hpat1 313556 313562 CAG_2 6
hpat1 313563 313567 AG_2 4
hpat1 313573 313579 ACC_2 6
+hpat1 313583 313587 AA_2 4
+hpat1 313589 313593 AA_2 4
hpat1 313610 313618 GTCT_2 8
-hpat1 313632 313638 TGC_2 6
+hpat1 313618 313622 GG_2 4
+hpat1 313631 313637 CTG_2 6
+hpat1 313643 313647 CC_2 4
+hpat1 313648 313652 CC_2 4
+hpat1 313665 313669 CC_2 4
hpat1 313696 313702 CTC_2 6
hpat1 313707 313711 GC_2 4
hpat1 313759 313763 TA_2 4
-hpat1 313816 313820 AG_2 4
+hpat1 313770 313774 AA_2 4
+hpat1 313794 313798 GG_2 4
+hpat1 313815 313819 GA_2 4
hpat1 313824 313828 TG_2 4
hpat1 313840 313844 CT_2 4
-hpat1 313867 313871 AG_2 4
+hpat1 313847 313851 TT_2 4
+hpat1 313866 313872 GA_3 6
hpat1 313889 313893 GA_2 4
hpat1 313895 313899 GA_2 4
hpat1 313909 313915 AGT_2 6
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hpat1 313947 313951 GA_2 4
+hpat1 313954 313958 GG_2 4
hpat1 313963 313969 GCT_2 6
hpat1 313972 313978 AGG_2 6
-hpat1 313983 313987 GT_2 4
+hpat1 313982 313986 TG_2 4
+hpat1 314010 314022 CCCTGT_2 12
hpat1 314025 314029 TG_2 4
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hpat1 314034 314038 TC_2 4
hpat1 314039 314045 CGC_2 6
hpat1 314047 314053 TC_3 6
hpat1 314054 314069 GCCCC_3 15
+hpat1 314077 314081 CC_2 4
hpat1 314081 314085 AC_2 4
+hpat1 314085 314089 CC_2 4
hpat1 314108 314112 TC_2 4
hpat1 314118 314124 GT_3 6
hpat1 314142 314148 CA_3 6
@@ -11127,38 +21453,67 @@
hpat1 314168 314172 TC_2 4
hpat1 314188 314192 AG_2 4
hpat1 314192 314198 TCC_2 6
+hpat1 314201 314205 CC_2 4
hpat1 314214 314218 TC_2 4
hpat1 314224 314228 TC_2 4
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hpat1 314235 314239 CG_2 4
+hpat1 314257 314263 CCA_2 6
+hpat1 314267 314273 CCT_2 6
hpat1 314291 314295 CT_2 4
hpat1 314306 314310 GC_2 4
-hpat1 314345 314357 CAA_4 12
+hpat1 314318 314336 TT_9 18
+hpat1 314340 314344 AA_2 4
+hpat1 314344 314356 ACA_4 12
+hpat1 314356 314362 AA_3 6
+hpat1 314369 314379 AA_5 10
hpat1 314384 314388 TG_2 4
-hpat1 314394 314398 GA_2 4
+hpat1 314393 314397 AG_2 4
hpat1 314403 314411 CTGT_2 8
+hpat1 314418 314422 GA_2 4
hpat1 314427 314431 TC_2 4
-hpat1 314452 314460 TCTG_2 8
-hpat1 314475 314481 CAG_2 6
+hpat1 314439 314443 GG_2 4
+hpat1 314444 314448 GG_2 4
+hpat1 314451 314455 CT_2 4
+hpat1 314459 314463 GG_2 4
+hpat1 314473 314477 CA_2 4
hpat1 314514 314518 GT_2 4
+hpat1 314523 314527 CC_2 4
hpat1 314537 314541 TG_2 4
hpat1 314553 314557 TG_2 4
hpat1 314557 314561 CT_2 4
+hpat1 314568 314576 CCCT_2 8
hpat1 314600 314604 GT_2 4
+hpat1 314622 314626 GT_2 4
+hpat1 314656 314660 CT_2 4
hpat1 314684 314690 GAA_2 6
+hpat1 314714 314722 CAGG_2 8
hpat1 314738 314742 CT_2 4
hpat1 314751 314757 GTG_2 6
+hpat1 314773 314777 GG_2 4
+hpat1 314781 314787 CCT_2 6
+hpat1 314793 314797 TG_2 4
hpat1 314801 314805 TG_2 4
+hpat1 314816 314820 CA_2 4
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+hpat1 314846 314850 AA_2 4
hpat1 314852 314860 TGGA_2 8
+hpat1 314883 314887 AA_2 4
hpat1 314888 314892 GA_2 4
hpat1 314895 314899 AT_2 4
+hpat1 314902 314906 AA_2 4
hpat1 314910 314914 TG_2 4
hpat1 314933 314941 GCAG_2 8
+hpat1 314952 314956 GG_2 4
hpat1 314977 314981 TG_2 4
-hpat1 315014 315018 AC_2 4
+hpat1 314996 315002 AAG_2 6
+hpat1 315013 315017 CA_2 4
+hpat1 315040 315046 CCA_2 6
hpat1 315056 315060 GT_2 4
hpat1 315062 315066 CT_2 4
hpat1 315070 315074 AT_2 4
hpat1 315075 315079 TA_2 4
+hpat1 315083 315087 GG_2 4
hpat1 315087 315099 ATA_4 12
hpat1 315099 315105 GCT_2 6
hpat1 315106 315110 CA_2 4
@@ -11167,159 +21522,294 @@
hpat1 315157 315161 GT_2 4
hpat1 315173 315177 AG_2 4
hpat1 315190 315198 CAGG_2 8
+hpat1 315210 315216 AGG_2 6
+hpat1 315223 315229 AGC_2 6
hpat1 315236 315240 AG_2 4
+hpat1 315278 315282 GG_2 4
hpat1 315282 315288 TGC_2 6
hpat1 315288 315292 CT_2 4
-hpat1 315317 315321 GT_2 4
+hpat1 315292 315300 CCCT_2 8
+hpat1 315316 315320 TG_2 4
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hpat1 315345 315351 GTG_2 6
-hpat1 315373 315377 CA_2 4
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hpat1 315386 315390 AG_2 4
+hpat1 315410 315414 AG_2 4
hpat1 315422 315426 GT_2 4
+hpat1 315455 315459 GT_2 4
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+hpat1 315496 315500 CT_2 4
hpat1 315501 315505 AC_2 4
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hpat1 315536 315540 GT_2 4
+hpat1 315561 315565 CT_2 4
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hpat1 315591 315595 GT_2 4
hpat1 315612 315618 CTT_2 6
-hpat1 315626 315630 CT_2 4
-hpat1 315655 315661 GAG_2 6
+hpat1 315625 315629 TC_2 4
+hpat1 315636 315644 AAGC_2 8
+hpat1 315654 315658 AG_2 4
hpat1 315663 315667 AG_2 4
hpat1 315669 315673 GA_2 4
-hpat1 315676 315680 TG_2 4
+hpat1 315675 315679 GT_2 4
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+hpat1 315717 315723 GGA_2 6
+hpat1 315726 315730 CC_2 4
hpat1 315766 315772 AG_3 6
hpat1 315783 315787 GA_2 4
+hpat1 315800 315804 GG_2 4
+hpat1 315817 315821 GT_2 4
hpat1 315822 315830 TGAG_2 8
hpat1 315836 315840 TA_2 4
-hpat1 315873 315877 AC_2 4
+hpat1 315841 315845 AC_2 4
+hpat1 315867 315875 GGAC_2 8
hpat1 315878 315886 GACA_2 8
-hpat1 315896 315908 CAGGCC_2 12
+hpat1 315893 315899 CAG_2 6
+hpat1 315905 315913 GCCA_2 8
hpat1 315929 315935 GCA_2 6
-hpat1 315967 315973 TCT_2 6
-hpat1 315976 315982 TCT_2 6
+hpat1 315966 315970 CT_2 4
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+hpat1 315981 315985 TT_2 4
hpat1 315985 315989 CA_2 4
hpat1 316001 316007 TAA_2 6
hpat1 316029 316033 TC_2 4
hpat1 316046 316050 AG_2 4
hpat1 316061 316067 ACA_2 6
-hpat1 316077 316081 GA_2 4
+hpat1 316076 316080 AG_2 4
+hpat1 316150 316154 AG_2 4
+hpat1 316185 316189 GG_2 4
hpat1 316192 316196 CA_2 4
hpat1 316209 316213 CA_2 4
hpat1 316228 316232 AG_2 4
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+hpat1 316280 316284 TC_2 4
hpat1 316291 316299 GTCC_2 8
+hpat1 316305 316309 AA_2 4
+hpat1 316315 316323 GGGA_2 8
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+hpat1 316362 316366 GG_2 4
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hpat1 316399 316403 AG_2 4
hpat1 316404 316408 TG_2 4
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hpat1 316466 316472 AGA_2 6
hpat1 316479 316483 TC_2 4
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+hpat1 316490 316498 TTCC_2 8
+hpat1 316523 316527 GG_2 4
+hpat1 316541 316545 GG_2 4
hpat1 316545 316549 TC_2 4
-hpat1 316569 316575 GAG_2 6
+hpat1 316550 316554 GG_2 4
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hpat1 316589 316593 TG_2 4
+hpat1 316612 316616 GG_2 4
hpat1 316616 316620 TG_2 4
hpat1 316651 316655 TC_2 4
-hpat1 316706 316710 TG_2 4
+hpat1 316690 316694 CC_2 4
+hpat1 316701 316707 GGT_2 6
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+hpat1 316788 316792 CA_2 4
hpat1 316801 316805 GT_2 4
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hpat1 316831 316835 TC_2 4
hpat1 316868 316872 TC_2 4
hpat1 316881 316885 TC_2 4
-hpat1 316891 316897 CAG_2 6
+hpat1 316890 316896 GCA_2 6
+hpat1 316899 316903 GG_2 4
hpat1 316906 316912 TGG_2 6
+hpat1 316921 316927 CTT_2 6
hpat1 316933 316939 CAG_2 6
+hpat1 316941 316945 TT_2 4
hpat1 316950 316954 CT_2 4
+hpat1 316981 316985 TG_2 4
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hpat1 316995 316999 AG_2 4
hpat1 317013 317021 GCTG_2 8
hpat1 317034 317038 CT_2 4
+hpat1 317042 317048 TAC_2 6
hpat1 317050 317056 GCT_2 6
-hpat1 317100 317104 CA_2 4
+hpat1 317067 317071 CA_2 4
+hpat1 317074 317078 CC_2 4
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+hpat1 317097 317101 TC_2 4
hpat1 317104 317108 AT_2 4
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hpat1 317130 317134 AG_2 4
hpat1 317134 317138 GA_2 4
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hpat1 317144 317150 CTG_2 6
hpat1 317182 317188 CT_3 6
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hpat1 317202 317210 CTGG_2 8
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hpat1 317276 317282 CAG_2 6
hpat1 317285 317289 GA_2 4
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hpat1 317347 317353 GTG_2 6
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hpat1 317468 317472 AG_2 4
hpat1 317477 317481 CT_2 4
hpat1 317482 317486 TC_2 4
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hpat1 317595 317599 TG_2 4
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hpat1 317606 317610 AT_2 4
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hpat1 317637 317641 TA_2 4
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hpat1 317718 317722 AC_2 4
hpat1 317723 317727 AG_2 4
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hpat1 317765 317771 CA_3 6
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hpat1 317862 317866 TC_2 4
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hpat1 317907 317913 AC_3 6
hpat1 317919 317923 TC_2 4
hpat1 317953 317957 GA_2 4
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hpat1 317972 317976 TC_2 4
hpat1 317988 317998 GACTA_2 10
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hpat1 318013 318017 TC_2 4
hpat1 318022 318028 AT_3 6
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hpat1 318111 318115 CA_2 4
hpat1 318120 318124 TG_2 4
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hpat1 318175 318179 GC_2 4
hpat1 318181 318185 TC_2 4
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hpat1 318201 318205 CT_2 4
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hpat1 318222 318226 TG_2 4
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hpat1 318267 318271 AT_2 4
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hpat1 318360 318364 CA_2 4
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hpat1 318382 318386 CT_2 4
hpat1 318393 318397 CT_2 4
hpat1 318412 318416 AG_2 4
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hpat1 318454 318458 TG_2 4
hpat1 318475 318481 TCT_2 6
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hpat1 318508 318512 CA_2 4
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hpat1 318542 318546 CA_2 4
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hpat1 318566 318570 CA_2 4
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hpat1 318683 318687 GA_2 4
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hpat1 318745 318751 GTG_2 6
hpat1 318751 318755 AC_2 4
hpat1 318777 318783 AGG_2 6
hpat1 318785 318789 GA_2 4
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hpat1 318816 318820 AG_2 4
hpat1 318833 318837 GA_2 4
hpat1 318873 318877 GA_2 4
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hpat1 318892 318900 CAAA_2 8
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hpat1 318934 318942 CTTC_2 8
hpat1 318945 318949 TC_2 4
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hpat1 318966 318970 AG_2 4
hpat1 318974 318978 CA_2 4
hpat1 318988 318992 CA_2 4
hpat1 318992 318996 GT_2 4
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hpat1 319024 319030 TCC_2 6
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hpat1 319115 319127 TC_6 12
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hpat1 319161 319165 CT_2 4
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hpat1 319186 319190 CA_2 4
hpat1 319192 319200 CACC_2 8
hpat1 319204 319210 CAA_2 6
hpat1 319236 319242 TGG_2 6
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hpat1 319307 319311 GA_2 4
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hpat1 319373 319377 CA_2 4
hpat1 319389 319393 TA_2 4
hpat1 319426 319430 TC_2 4
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hpat1 319476 319480 AC_2 4
hpat1 319495 319499 AG_2 4
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hpat1 319621 319625 CA_2 4
hpat1 319630 319636 GAG_2 6
hpat1 319636 319640 AC_2 4
+hpat1 319689 319693 GA_2 4
hpat1 319698 319704 GAG_2 6
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hpat1 319731 319735 TG_2 4
-hpat1 319752 319758 AGG_2 6
+hpat1 319750 319756 GGA_2 6
hpat1 319770 319774 TG_2 4
hpat1 319793 319797 TG_2 4
hpat1 319816 319820 AC_2 4
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hpat1 319861 319871 CTGGG_2 10
hpat1 319899 319903 AC_2 4
hpat1 319914 319920 TGC_2 6
@@ -11329,125 +21819,228 @@
hpat1 320018 320022 TG_2 4
hpat1 320028 320034 GCT_2 6
hpat1 320073 320077 GA_2 4
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hpat1 320157 320161 CA_2 4
hpat1 320165 320169 AG_2 4
hpat1 320184 320188 TA_2 4
hpat1 320209 320213 AG_2 4
hpat1 320227 320231 GA_2 4
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hpat1 320374 320378 AC_2 4
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hpat1 320408 320414 GA_3 6
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hpat1 320434 320438 GA_2 4
hpat1 320475 320479 CA_2 4
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hpat1 320554 320558 CA_2 4
hpat1 320572 320576 AG_2 4
hpat1 320577 320583 TCC_2 6
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hpat1 320626 320630 TG_2 4
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hpat1 320646 320652 TCT_2 6
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hpat1 320661 320665 GA_2 4
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hpat1 320670 320674 TC_2 4
hpat1 320675 320679 CT_2 4
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hpat1 320708 320712 TC_2 4
hpat1 320724 320728 TC_2 4
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hpat1 320788 320792 AT_2 4
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hpat1 320877 320881 AT_2 4
hpat1 320896 320902 TCC_2 6
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hpat1 320958 320962 CA_2 4
hpat1 320972 320978 CTG_2 6
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hpat1 321016 321020 CT_2 4
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hpat1 321054 321058 CT_2 4
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hpat1 321105 321109 CT_2 4
hpat1 321156 321160 TG_2 4
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hpat1 321282 321286 GA_2 4
hpat1 321296 321300 CT_2 4
hpat1 321314 321324 AGTGC_2 10
hpat1 321324 321328 TG_2 4
hpat1 321329 321333 TC_2 4
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hpat1 321412 321418 CAC_2 6
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hpat1 321556 321560 AC_2 4
hpat1 321573 321577 TC_2 4
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hpat1 321585 321589 AT_2 4
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hpat1 321659 321665 CTT_2 6
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hpat1 321783 321787 CT_2 4
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hpat1 321816 321820 TC_2 4
hpat1 321820 321824 TG_2 4
hpat1 321825 321829 AG_2 4
hpat1 321847 321851 AC_2 4
hpat1 321851 321855 AG_2 4
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hpat1 321885 321891 TG_3 6
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hpat1 321930 321934 TG_2 4
hpat1 321944 321948 AT_2 4
hpat1 321949 321955 CTC_2 6
hpat1 321955 321959 AG_2 4
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hpat1 321969 321984 CTT_5 15
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-hpat1 322101 322122 TCT_7 21
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hpat1 322179 322183 GA_2 4
hpat1 322188 322192 TC_2 4
hpat1 322193 322197 CT_2 4
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hpat1 322345 322349 AC_2 4
hpat1 322376 322380 TC_2 4
hpat1 322391 322395 CT_2 4
hpat1 322416 322420 TG_2 4
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hpat1 322445 322449 GA_2 4
hpat1 322454 322458 TC_2 4
hpat1 322459 322463 CT_2 4
hpat1 322487 322491 CA_2 4
hpat1 322492 322496 TC_2 4
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hpat1 322602 322608 TAT_2 6
hpat1 322613 322617 AG_2 4
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hpat1 322630 322634 GT_2 4
hpat1 322646 322650 TC_2 4
hpat1 322719 322723 TG_2 4
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hpat1 322752 322756 TA_2 4
hpat1 322756 322762 TG_3 6
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hpat1 322795 322805 GTTTG_2 10
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hpat1 322911 322921 TCCCT_2 10
hpat1 322921 322925 CA_2 4
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hpat1 322934 322938 CT_2 4
hpat1 322952 322956 TA_2 4
hpat1 322975 322979 CA_2 4
hpat1 322984 322988 AT_2 4
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hpat1 323008 323012 GT_2 4
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hpat1 323021 323027 CTA_2 6
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hpat1 323035 323041 GAG_2 6
hpat1 323072 323076 AG_2 4
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hpat1 323125 323129 TG_2 4
hpat1 323156 323160 AG_2 4
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hpat1 323200 323204 CT_2 4
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hpat1 323268 323274 CGC_2 6
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hpat1 323282 323290 CTCA_2 8
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hpat1 323347 323353 GTG_2 6
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hpat1 323419 323423 GA_2 4
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hpat1 323451 323455 TC_2 4
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hpat1 323481 323490 GTG_3 9
hpat1 323490 323494 TG_2 4
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hpat1 323552 323556 AG_2 4
hpat1 323569 323573 GA_2 4
hpat1 323574 323578 CA_2 4
@@ -11455,845 +22048,1536 @@
hpat1 323617 323641 TC_12 24
hpat1 323645 323653 TA_4 8
hpat1 323656 323674 AG_9 18
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hpat1 323737 323741 AT_2 4
hpat1 323745 323749 TA_2 4
hpat1 323751 323755 CA_2 4
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hpat1 323786 323790 GA_2 4
hpat1 323791 323795 CT_2 4
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hpat1 323836 323840 CT_2 4
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hpat1 323860 323864 CT_2 4
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hpat1 323886 323890 TA_2 4
hpat1 323909 323913 TA_2 4
hpat1 323915 323919 TC_2 4
hpat1 323919 323923 AT_2 4
hpat1 323938 323942 GT_2 4
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hpat1 323999 324005 GCA_2 6
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hpat1 324052 324056 TG_2 4
hpat1 324056 324060 TA_2 4
hpat1 324061 324065 CA_2 4
hpat1 324093 324097 AC_2 4
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hpat1 324124 324128 GA_2 4
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hpat1 324205 324209 GA_2 4
hpat1 324212 324216 TC_2 4
hpat1 324217 324221 CT_2 4
hpat1 324245 324249 CA_2 4
hpat1 324250 324254 TC_2 4
+hpat1 324291 324295 TC_2 4
hpat1 324331 324335 CA_2 4
hpat1 324348 324386 TG_19 38
hpat1 324388 324396 TG_4 8
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hpat1 324462 324470 GCCT_2 8
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hpat1 324533 324539 TA_3 6
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hpat1 324563 324567 TG_2 4
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hpat1 324601 324605 TG_2 4
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hpat1 324640 324646 CAA_2 6
hpat1 324648 324652 CA_2 4
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hpat1 324693 324703 TGTTT_2 10
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hpat1 324747 324751 GA_2 4
hpat1 324761 324765 CA_2 4
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hpat1 324774 324783 GTT_3 9
hpat1 324800 324806 GTG_2 6
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hpat1 324889 324895 CA_3 6
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hpat1 324928 324932 AG_2 4
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hpat1 325154 325162 CGGA_2 8
hpat1 325183 325187 AC_2 4
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hpat1 325214 325218 TC_2 4
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hpat1 325252 325256 AT_2 4
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hpat1 325308 325314 AGG_2 6
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hpat1 325349 325353 CT_2 4
hpat1 325361 325367 CAA_2 6
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hpat1 348040 348044 GA_2 4
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hpat1 348167 348177 CATGG_2 10
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hpat1 348212 348216 CA_2 4
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hpat1 348231 348235 TG_2 4
hpat1 348236 348244 ATGG_2 8
hpat1 348264 348268 CT_2 4
@@ -12303,103 +23587,171 @@
hpat1 348299 348303 TG_2 4
hpat1 348332 348336 AG_2 4
hpat1 348336 348340 CA_2 4
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hpat1 348426 348430 AC_2 4
hpat1 348435 348445 CAGGG_2 10
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hpat1 348551 348557 CAG_2 6
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hpat1 348676 348684 GAGT_2 8
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hpat1 348712 348718 GAA_2 6
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hpat1 348766 348770 AG_2 4
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hpat1 348890 348896 GCC_2 6
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hpat1 348924 348928 AG_2 4
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hpat1 348957 348961 TC_2 4
hpat1 348982 348990 CTGC_2 8
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hpat1 349008 349012 GA_2 4
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hpat1 349039 349043 TG_2 4
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hpat1 349055 349059 AC_2 4
hpat1 349074 349078 CT_2 4
hpat1 349096 349100 TC_2 4
hpat1 349100 349104 TG_2 4
hpat1 349125 349129 AC_2 4
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hpat1 349162 349166 AC_2 4
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hpat1 349203 349207 AG_2 4
hpat1 349218 349222 GT_2 4
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hpat1 349260 349264 TG_2 4
hpat1 349264 349268 AG_2 4
hpat1 349269 349277 TG_4 8
hpat1 349277 349281 TA_2 4
-hpat1 349284 349288 GT_2 4
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hpat1 349291 349299 TG_4 8
hpat1 349302 349308 GT_3 6
hpat1 349308 349312 AC_2 4
hpat1 349313 349319 TG_3 6
hpat1 349324 349328 AC_2 4
-hpat1 349351 349355 TG_2 4
-hpat1 349355 349359 GT_2 4
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hpat1 349368 349372 CA_2 4
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hpat1 349413 349419 TGT_2 6
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hpat1 349465 349471 GCT_2 6
hpat1 349480 349484 CA_2 4
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hpat1 349548 349554 CTC_2 6
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hpat1 349581 349585 AG_2 4
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hpat1 349595 349599 CA_2 4
hpat1 349620 349624 TG_2 4
hpat1 349628 349632 TG_2 4
hpat1 349638 349642 GT_2 4
hpat1 349650 349654 AC_2 4
-hpat1 349684 349692 AGAC_2 8
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hpat1 349701 349705 AC_2 4
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hpat1 349727 349731 AC_2 4
hpat1 349747 349751 GA_2 4
hpat1 349751 349755 CA_2 4
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hpat1 349877 349883 ATT_2 6
hpat1 349908 349912 TA_2 4
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hpat1 349975 349979 AC_2 4
hpat1 349999 350003 CT_2 4
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hpat1 350176 350180 CT_2 4
hpat1 350197 350203 GCA_2 6
hpat1 350203 350207 TC_2 4
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hpat1 350270 350274 CA_2 4
hpat1 350312 350320 AGGC_2 8
hpat1 350343 350347 GA_2 4
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hpat1 350376 350380 TC_2 4
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hpat1 350407 350411 GT_2 4
hpat1 350453 350457 CA_2 4
hpat1 350496 350500 AG_2 4
hpat1 350530 350534 AG_2 4
hpat1 350535 350539 GA_2 4
+hpat1 350548 350564 AA_8 16
+hpat1 350613 350623 AAATA_2 10
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hpat1 350640 350644 AG_2 4
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hpat1 350669 350675 ATG_2 6
+hpat1 350677 350683 TGA_2 6
hpat1 350689 350697 AGGG_2 8
-hpat1 350699 350703 TC_2 4
+hpat1 350698 350704 CT_3 6
hpat1 350704 350710 GAG_2 6
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hpat1 350724 350728 GA_2 4
hpat1 350731 350740 GAA_3 9
-hpat1 350932 350936 CA_2 4
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hpat1 350966 350970 AG_2 4
hpat1 350987 350991 AC_2 4
hpat1 350996 351002 TG_3 6
@@ -12410,38 +23762,69 @@
hpat1 351038 351042 CT_2 4
hpat1 351050 351056 AC_3 6
hpat1 351089 351093 AC_2 4
-hpat1 351103 351107 CT_2 4
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hpat1 351108 351112 GT_2 4
-hpat1 351198 351202 GA_2 4
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hpat1 351243 351247 TG_2 4
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+hpat1 351260 351266 GG_3 6
hpat1 351267 351273 GAT_2 6
hpat1 351273 351277 AG_2 4
hpat1 351278 351282 TG_2 4
hpat1 351282 351286 AG_2 4
hpat1 351294 351298 CA_2 4
+hpat1 351299 351303 CC_2 4
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hpat1 351325 351329 GA_2 4
hpat1 351331 351335 AG_2 4
hpat1 351339 351343 AG_2 4
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hpat1 351366 351370 CA_2 4
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hpat1 351383 351389 CAC_2 6
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hpat1 351443 351447 AG_2 4
hpat1 351452 351456 AC_2 4
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hpat1 351491 351495 TG_2 4
hpat1 351495 351501 AG_3 6
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hpat1 351535 351539 TG_2 4
-hpat1 351549 351553 GA_2 4
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hpat1 351580 351588 CTTT_2 8
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hpat1 351606 351610 GA_2 4
hpat1 351654 351658 TC_2 4
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hpat1 351708 351712 TC_2 4
hpat1 351743 351747 CA_2 4
-hpat1 351774 351778 AG_2 4
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+hpat1 351770 351776 TAG_2 6
+hpat1 351780 351784 GG_2 4
hpat1 351807 351811 TC_2 4
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hpat1 351906 351910 GA_2 4
hpat1 351910 351914 AC_2 4
-hpat1 351918 351924 TGT_2 6
+hpat1 351917 351921 GT_2 4
hpat1 351944 351948 CA_2 4
hpat1 351960 351966 AGG_2 6
hpat1 351980 351984 TC_2 4
@@ -12449,51 +23832,95 @@
hpat1 351988 351997 GAG_3 9
hpat1 351999 352003 AG_2 4
hpat1 352004 352010 TC_3 6
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hpat1 352025 352029 CA_2 4
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hpat1 352080 352084 TG_2 4
hpat1 352118 352122 GA_2 4
hpat1 352147 352153 CAA_2 6
hpat1 352161 352165 CT_2 4
hpat1 352166 352170 TC_2 4
+hpat1 352170 352176 AA_3 6
hpat1 352176 352196 GAAA_5 20
-hpat1 352228 352232 CT_2 4
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hpat1 352255 352261 GCA_2 6
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hpat1 352394 352398 AC_2 4
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hpat1 352427 352435 AGGA_2 8
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hpat1 352459 352463 GT_2 4
hpat1 352472 352476 TG_2 4
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hpat1 352499 352503 AT_2 4
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hpat1 352524 352528 GA_2 4
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hpat1 352599 352603 CT_2 4
hpat1 352605 352609 TG_2 4
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-hpat1 352672 352680 TAAT_2 8
-hpat1 352686 352696 TAAAA_2 10
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hpat1 352735 352739 TA_2 4
hpat1 352765 352771 TGG_2 6
hpat1 352784 352788 GA_2 4
hpat1 352792 352796 GA_2 4
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hpat1 352825 352829 CT_2 4
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hpat1 352888 352894 CAG_2 6
hpat1 352902 352908 AGA_2 6
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hpat1 352993 352997 TC_2 4
-hpat1 353003 353011 CAAA_2 8
-hpat1 353020 353036 CAAA_4 16
+hpat1 352998 353002 AA_2 4
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hpat1 353063 353069 TCC_2 6
hpat1 353070 353076 AC_3 6
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hpat1 353110 353114 CT_2 4
-hpat1 353122 353126 GA_2 4
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hpat1 353133 353137 TC_2 4
-hpat1 353141 353145 GA_2 4
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hpat1 353154 353160 TG_3 6
hpat1 353186 353190 GT_2 4
hpat1 353203 353207 AC_2 4
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hpat1 353256 353262 TC_3 6
hpat1 353262 353268 CTG_2 6
+hpat1 353270 353274 GG_2 4
hpat1 353275 353281 AGG_2 6
hpat1 353286 353290 CA_2 4
hpat1 353290 353294 GT_2 4
@@ -12501,81 +23928,144 @@
hpat1 353301 353305 CT_2 4
hpat1 353308 353316 ATTC_2 8
hpat1 353349 353353 AG_2 4
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hpat1 353417 353421 TA_2 4
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hpat1 353494 353498 AC_2 4
hpat1 353522 353530 TGGG_2 8
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hpat1 353577 353583 ACC_2 6
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hpat1 353616 353620 GA_2 4
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hpat1 353650 353656 TCT_2 6
hpat1 353656 353666 CT_5 10
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hpat1 353672 353676 GA_2 4
hpat1 353685 353691 CT_3 6
-hpat1 353797 353801 TG_2 4
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hpat1 353836 353840 AG_2 4
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hpat1 353892 353900 ATCC_2 8
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hpat1 353959 353963 TC_2 4
hpat1 354013 354017 CT_2 4
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hpat1 354045 354051 GT_3 6
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hpat1 354088 354092 GA_2 4
hpat1 354093 354097 AG_2 4
hpat1 354102 354106 CT_2 4
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hpat1 354194 354198 AG_2 4
hpat1 354214 354218 CA_2 4
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hpat1 354254 354258 GA_2 4
hpat1 354286 354290 TC_2 4
hpat1 354292 354296 TC_2 4
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hpat1 354377 354383 TCT_2 6
hpat1 354401 354405 AC_2 4
hpat1 354421 354425 CT_2 4
hpat1 354433 354439 CTT_2 6
hpat1 354462 354466 CT_2 4
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hpat1 354539 354543 CT_2 4
hpat1 354550 354554 TC_2 4
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hpat1 354624 354632 TACC_2 8
hpat1 354637 354641 TC_2 4
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hpat1 354781 354785 AC_2 4
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hpat1 354847 354851 TA_2 4
hpat1 354864 354868 CA_2 4
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hpat1 354896 354900 CT_2 4
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hpat1 354921 354927 ATT_2 6
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hpat1 354996 355006 ATTTT_2 10
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hpat1 355052 355056 GC_2 4
hpat1 355058 355064 GAG_2 6
hpat1 355068 355076 AGGA_2 8
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hpat1 355099 355103 GA_2 4
hpat1 355116 355120 TG_2 4
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hpat1 355167 355173 TGG_2 6
hpat1 355237 355241 GA_2 4
hpat1 355255 355261 ATG_2 6
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hpat1 355269 355273 TC_2 4
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hpat1 355332 355338 AGG_2 6
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+hpat1 355343 355352 GAA_3 9
hpat1 355364 355370 AGG_2 6
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hpat1 355393 355397 CG_2 4
hpat1 355427 355431 GA_2 4
hpat1 355436 355440 TC_2 4
hpat1 355471 355475 GA_2 4
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hpat1 355518 355524 CTC_2 6
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hpat1 355588 355592 TC_2 4
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hpat1 355646 355650 CA_2 4
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hpat1 355705 355711 GAA_2 6
hpat1 355727 355731 TC_2 4
-hpat1 355746 355756 CACTC_2 10
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hpat1 355766 355774 CTGC_2 8
-hpat1 355784 355790 CTC_2 6
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hpat1 355791 355795 TC_2 4
hpat1 355797 355805 TACT_2 8
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hpat1 355838 355842 TG_2 4
-hpat1 355882 355890 CTTT_2 8
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+hpat1 355864 355870 ATT_2 6
+hpat1 355879 355887 TTTC_2 8
+hpat1 355887 355897 TT_5 10
hpat1 355898 355902 GA_2 4
hpat1 355907 355911 TC_2 4
hpat1 355912 355916 CT_2 4
@@ -12583,298 +24073,543 @@
hpat1 355945 355949 TC_2 4
hpat1 355985 355991 TCC_2 6
hpat1 355991 355997 CTC_2 6
+hpat1 355999 356005 CCT_2 6
hpat1 356028 356034 CAC_2 6
hpat1 356046 356052 GTT_2 6
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hpat1 356064 356068 AG_2 4
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hpat1 356121 356127 TCC_2 6
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hpat1 356170 356174 TG_2 4
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hpat1 356207 356211 GC_2 4
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hpat1 356234 356240 GTA_2 6
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-hpat1 356296 356302 GAA_2 6
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hpat1 356313 356317 TA_2 4
hpat1 356331 356335 AT_2 4
hpat1 356351 356363 TGGA_3 12
hpat1 356397 356401 GA_2 4
hpat1 356417 356423 TGG_2 6
-hpat1 356438 356444 TAA_2 6
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hpat1 356488 356492 TC_2 4
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hpat1 356520 356524 GT_2 4
hpat1 356546 356550 AG_2 4
hpat1 356550 356554 AC_2 4
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+hpat1 356562 356568 CA_3 6
hpat1 356616 356620 AC_2 4
-hpat1 356635 356643 TACA_2 8
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hpat1 356662 356666 GT_2 4
hpat1 356668 356674 TGG_2 6
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+hpat1 364657 364663 TT_3 6
+hpat1 364667 364671 TT_2 4
hpat1 364690 364694 GT_2 4
hpat1 364712 364716 TC_2 4
+hpat1 364773 364779 CCA_2 6
+hpat1 364787 364791 CT_2 4
hpat1 364791 364795 AG_2 4
+hpat1 364801 364805 TT_2 4
hpat1 364805 364817 ACTT_3 12
hpat1 364817 364825 ATTT_2 8
hpat1 364828 364832 AC_2 4
@@ -12882,108 +24617,216 @@
hpat1 364841 364845 CT_2 4
hpat1 364869 364873 CA_2 4
hpat1 364913 364919 TCC_2 6
+hpat1 364946 364950 CA_2 4
hpat1 364957 364963 ACC_2 6
-hpat1 364980 364984 CT_2 4
+hpat1 364975 364979 TT_2 4
+hpat1 364979 364983 TC_2 4
+hpat1 365021 365025 TC_2 4
hpat1 365045 365051 TCC_2 6
hpat1 365105 365111 GAG_2 6
+hpat1 365114 365120 TT_3 6
hpat1 365121 365125 AC_2 4
-hpat1 365179 365183 CG_2 4
+hpat1 365140 365144 AA_2 4
+hpat1 365178 365182 GC_2 4
hpat1 365200 365204 TC_2 4
hpat1 365252 365256 GA_2 4
+hpat1 365273 365277 GA_2 4
hpat1 365284 365288 TC_2 4
+hpat1 365292 365296 AA_2 4
+hpat1 365300 365304 AA_2 4
hpat1 365315 365321 TAG_2 6
+hpat1 365361 365365 GA_2 4
+hpat1 365379 365391 GGAGGT_2 12
hpat1 365402 365406 GA_2 4
hpat1 365443 365447 CT_2 4
+hpat1 365452 365458 AA_3 6
+hpat1 365460 365468 AA_4 8
hpat1 365494 365498 AG_2 4
+hpat1 365500 365504 GT_2 4
+hpat1 365508 365512 CC_2 4
hpat1 365554 365558 AT_2 4
-hpat1 365574 365578 TC_2 4
+hpat1 365565 365569 CT_2 4
+hpat1 365573 365579 CT_3 6
hpat1 365580 365584 TC_2 4
hpat1 365592 365596 AC_2 4
hpat1 365614 365618 TG_2 4
-hpat1 365620 365626 AC_3 6
+hpat1 365619 365625 CA_3 6
hpat1 365641 365645 AC_2 4
hpat1 365645 365649 AT_2 4
+hpat1 365652 365658 ATT_2 6
hpat1 365665 365669 CA_2 4
hpat1 365686 365690 GC_2 4
+hpat1 365703 365707 TT_2 4
+hpat1 365731 365735 TT_2 4
+hpat1 365742 365746 TT_2 4
+hpat1 365748 365752 GG_2 4
hpat1 365758 365762 TG_2 4
hpat1 365785 365789 CT_2 4
hpat1 365801 365805 CT_2 4
+hpat1 365806 365810 GG_2 4
hpat1 365810 365814 CT_2 4
hpat1 365815 365821 CAC_2 6
+hpat1 365834 365838 CT_2 4
hpat1 365848 365852 CG_2 4
hpat1 365860 365866 CAG_2 6
+hpat1 365884 365888 GC_2 4
+hpat1 365891 365897 GGT_2 6
hpat1 365909 365913 AG_2 4
hpat1 365917 365921 CT_2 4
-hpat1 365982 365986 CT_2 4
+hpat1 365976 365984 GGCT_2 8
hpat1 365994 365998 TG_2 4
hpat1 365998 366002 GA_2 4
+hpat1 366005 366009 GA_2 4
+hpat1 366025 366029 TC_2 4
+hpat1 366036 366040 TT_2 4
hpat1 366058 366062 TG_2 4
+hpat1 366065 366069 TA_2 4
+hpat1 366069 366073 AA_2 4
+hpat1 366074 366078 GG_2 4
+hpat1 366083 366087 CC_2 4
hpat1 366088 366094 ACA_2 6
hpat1 366105 366109 CT_2 4
hpat1 366124 366128 GA_2 4
hpat1 366128 366134 AGG_2 6
+hpat1 366138 366144 TTC_2 6
+hpat1 366157 366161 GG_2 4
hpat1 366173 366179 AGA_2 6
-hpat1 366196 366200 CG_2 4
+hpat1 366184 366188 TT_2 4
+hpat1 366195 366199 GC_2 4
+hpat1 366261 366265 GA_2 4
hpat1 366267 366271 GA_2 4
+hpat1 366294 366298 CC_2 4
hpat1 366299 366303 TC_2 4
+hpat1 366307 366311 AA_2 4
+hpat1 366315 366321 AA_3 6
hpat1 366331 366337 GTG_2 6
+hpat1 366340 366344 GC_2 4
+hpat1 366377 366381 GA_2 4
hpat1 366418 366422 GA_2 4
hpat1 366423 366427 CG_2 4
hpat1 366451 366455 AG_2 4
hpat1 366460 366464 CT_2 4
hpat1 366465 366469 TC_2 4
-hpat1 366515 366519 AG_2 4
+hpat1 366469 366485 AA_8 16
+hpat1 366485 366489 AG_2 4
+hpat1 366493 366501 TT_4 8
+hpat1 366514 366518 GA_2 4
+hpat1 366549 366553 CC_2 4
+hpat1 366555 366559 GG_2 4
hpat1 366593 366597 AG_2 4
hpat1 366597 366603 GA_3 6
-hpat1 366611 366615 CG_2 4
-hpat1 366615 366619 GC_2 4
+hpat1 366609 366619 GGCGC_2 10
+hpat1 366619 366623 GG_2 4
hpat1 366655 366661 CGG_2 6
-hpat1 366768 366772 CG_2 4
+hpat1 366692 366696 GG_2 4
+hpat1 366725 366729 GG_2 4
+hpat1 366758 366762 GG_2 4
+hpat1 366767 366773 GC_3 6
hpat1 366775 366779 GA_2 4
-hpat1 366805 366811 GC_3 6
+hpat1 366796 366802 GGC_2 6
+hpat1 366804 366812 CG_4 8
hpat1 366815 366821 GCT_2 6
hpat1 366841 366851 GCTGG_2 10
-hpat1 366865 366871 CAG_2 6
+hpat1 366864 366870 GCA_2 6
+hpat1 366870 366874 GC_2 4
+hpat1 366878 366886 GGCC_2 8
+hpat1 366889 366895 CTG_2 6
hpat1 366907 366911 CT_2 4
+hpat1 366914 366918 CC_2 4
+hpat1 366918 366924 GGC_2 6
hpat1 366935 366939 CG_2 4
+hpat1 366941 366947 ACG_2 6
hpat1 366959 366965 CGG_2 6
+hpat1 366994 367000 GG_3 6
+hpat1 367005 367009 GG_2 4
+hpat1 367015 367019 GG_2 4
+hpat1 367021 367025 GG_2 4
+hpat1 367025 367029 GC_2 4
+hpat1 367036 367040 CT_2 4
hpat1 367050 367054 GT_2 4
-hpat1 367060 367064 GT_2 4
+hpat1 367057 367061 CG_2 4
hpat1 367065 367069 AC_2 4
hpat1 367069 367077 GCAC_2 8
+hpat1 367078 367082 CC_2 4
hpat1 367084 367090 AC_3 6
+hpat1 367091 367095 TT_2 4
hpat1 367095 367099 CA_2 4
+hpat1 367101 367105 CC_2 4
+hpat1 367111 367115 GG_2 4
hpat1 367115 367119 CG_2 4
+hpat1 367134 367138 TT_2 4
+hpat1 367161 367167 CC_3 6
hpat1 367180 367184 CG_2 4
+hpat1 367185 367189 CC_2 4
+hpat1 367198 367202 GG_2 4
+hpat1 367218 367222 GG_2 4
+hpat1 367237 367241 GT_2 4
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hpat1 367256 367260 AG_2 4
+hpat1 367270 367274 GG_2 4
+hpat1 367279 367283 TT_2 4
+hpat1 367299 367303 GG_2 4
hpat1 367307 367311 GT_2 4
+hpat1 367321 367325 GG_2 4
+hpat1 367327 367331 TG_2 4
+hpat1 367331 367335 GG_2 4
+hpat1 367340 367346 GGA_2 6
hpat1 367346 367350 CT_2 4
+hpat1 367350 367354 GG_2 4
+hpat1 367359 367363 GG_2 4
+hpat1 367370 367374 GG_2 4
+hpat1 367391 367395 GG_2 4
hpat1 367395 367399 AG_2 4
+hpat1 367409 367417 GGGT_2 8
hpat1 367427 367431 TG_2 4
hpat1 367431 367435 TC_2 4
+hpat1 367437 367441 GA_2 4
hpat1 367445 367449 GA_2 4
+hpat1 367471 367477 TGG_2 6
+hpat1 367479 367483 GG_2 4
+hpat1 367494 367498 GG_2 4
hpat1 367498 367502 AC_2 4
+hpat1 367517 367521 GG_2 4
+hpat1 367532 367536 GG_2 4
+hpat1 367555 367559 GG_2 4
+hpat1 367559 367563 GC_2 4
hpat1 367564 367570 GC_3 6
hpat1 367572 367576 TC_2 4
+hpat1 367597 367601 TC_2 4
hpat1 367607 367611 GC_2 4
hpat1 367636 367642 GC_3 6
hpat1 367642 367646 GT_2 4
-hpat1 367652 367658 TG_3 6
+hpat1 367651 367657 GT_3 6
hpat1 367659 367663 TG_2 4
-hpat1 367737 367741 GC_2 4
+hpat1 367673 367677 GG_2 4
+hpat1 367682 367686 GG_2 4
+hpat1 367686 367692 GAC_2 6
+hpat1 367697 367703 CCT_2 6
+hpat1 367706 367710 CT_2 4
+hpat1 367716 367722 CC_3 6
+hpat1 367736 367740 CG_2 4
hpat1 367770 367774 AC_2 4
-hpat1 367776 367782 GCC_2 6
+hpat1 367774 367780 CCG_2 6
+hpat1 367804 367808 GG_2 4
+hpat1 367817 367823 GG_3 6
hpat1 367823 367833 CGGGG_2 10
-hpat1 367866 367870 TG_2 4
+hpat1 367834 367838 GG_2 4
+hpat1 367865 367869 GT_2 4
hpat1 367884 367914 TG_15 30
hpat1 367917 367929 GC_6 12
hpat1 367931 367935 GC_2 4
hpat1 367970 367974 GT_2 4
+hpat1 367988 367992 AG_2 4
hpat1 367996 368000 AT_2 4
+hpat1 368002 368006 GG_2 4
+hpat1 368018 368022 CA_2 4
hpat1 368023 368027 CA_2 4
hpat1 368028 368038 ATTCT_2 10
hpat1 368041 368045 GT_2 4
+hpat1 368052 368056 AA_2 4
hpat1 368072 368076 TA_2 4
+hpat1 368096 368100 CC_2 4
+hpat1 368123 368127 CC_2 4
hpat1 368133 368137 CT_2 4
hpat1 368166 368172 ACT_2 6
hpat1 368174 368178 TG_2 4
@@ -12998,101 +24841,188 @@
hpat1 368245 368251 ATC_2 6
hpat1 368273 368277 GA_2 4
hpat1 368285 368289 GT_2 4
+hpat1 368307 368311 GG_2 4
hpat1 368352 368356 TG_2 4
hpat1 368376 368382 TAA_2 6
hpat1 368395 368399 AC_2 4
hpat1 368422 368426 CT_2 4
-hpat1 368439 368443 GT_2 4
-hpat1 368451 368457 CAT_2 6
+hpat1 368438 368442 TG_2 4
+hpat1 368442 368446 TT_2 4
+hpat1 368450 368459 TCA_3 9
+hpat1 368461 368465 AA_2 4
+hpat1 368535 368539 GG_2 4
+hpat1 368541 368547 CC_3 6
+hpat1 368584 368588 AT_2 4
hpat1 368647 368651 TG_2 4
+hpat1 368657 368667 CCTTC_2 10
hpat1 368675 368679 CT_2 4
hpat1 368689 368695 AGC_2 6
-hpat1 368703 368707 AG_2 4
-hpat1 368714 368722 TCTG_2 8
+hpat1 368702 368706 GA_2 4
+hpat1 368713 368717 CT_2 4
hpat1 368790 368794 TC_2 4
+hpat1 368823 368829 CCT_2 6
hpat1 368844 368852 GTGG_2 8
hpat1 368865 368871 AG_3 6
-hpat1 368903 368907 TC_2 4
-hpat1 368918 368926 AC_4 8
+hpat1 368902 368906 CT_2 4
+hpat1 368913 368919 CCA_2 6
+hpat1 368919 368927 CA_4 8
hpat1 368929 368935 CA_3 6
hpat1 368945 368951 TGG_2 6
hpat1 368951 368961 CTTTC_2 10
hpat1 368974 368978 CT_2 4
+hpat1 368979 368983 GA_2 4
hpat1 368998 369002 TA_2 4
+hpat1 369003 369007 AG_2 4
+hpat1 369018 369022 TT_2 4
hpat1 369031 369035 CA_2 4
-hpat1 369045 369049 GT_2 4
+hpat1 369044 369050 TG_3 6
hpat1 369057 369061 TA_2 4
+hpat1 369084 369088 TA_2 4
+hpat1 369096 369102 ATT_2 6
+hpat1 369108 369112 AA_2 4
hpat1 369128 369132 TG_2 4
hpat1 369145 369157 AC_6 12
hpat1 369157 369161 CT_2 4
hpat1 369206 369210 CA_2 4
+hpat1 369213 369217 TT_2 4
hpat1 369221 369227 GTT_2 6
-hpat1 369230 369245 GTTTT_3 15
+hpat1 369227 369242 TTTGT_3 15
+hpat1 369251 369255 TT_2 4
hpat1 369255 369259 GA_2 4
hpat1 369262 369266 TC_2 4
+hpat1 369269 369275 TTG_2 6
hpat1 369275 369279 CA_2 4
hpat1 369283 369287 AG_2 4
+hpat1 369336 369340 CC_2 4
+hpat1 369348 369354 CCT_2 6
hpat1 369373 369379 TG_3 6
+hpat1 369380 369386 CAT_2 6
+hpat1 369396 369406 TT_5 10
hpat1 369419 369423 TC_2 4
+hpat1 369528 369532 TT_2 4
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hpat1 369540 369544 AT_2 4
+hpat1 369548 369552 AA_2 4
hpat1 369556 369562 CTC_2 6
hpat1 369562 369566 AG_2 4
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hpat1 369579 369585 TCC_2 6
+hpat1 369629 369633 CA_2 4
hpat1 369634 369638 TA_2 4
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hpat1 369653 369657 AC_2 4
-hpat1 369746 369752 ATC_2 6
+hpat1 369690 369694 TT_2 4
+hpat1 369698 369702 CA_2 4
+hpat1 369704 369708 CC_2 4
+hpat1 369708 369712 AA_2 4
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+hpat1 369724 369728 CC_2 4
+hpat1 369745 369751 CAT_2 6
+hpat1 369752 369758 CCT_2 6
hpat1 369780 369790 ACCTC_2 10
-hpat1 369800 369804 TC_2 4
+hpat1 369799 369803 CT_2 4
+hpat1 369809 369813 CC_2 4
hpat1 369814 369818 CA_2 4
-hpat1 369823 369831 TCCA_2 8
+hpat1 369822 369830 ATCC_2 8
hpat1 369832 369840 TCCA_2 8
+hpat1 369855 369859 CT_2 4
+hpat1 369865 369871 TCC_2 6
hpat1 369887 369891 CG_2 4
hpat1 369891 369895 TC_2 4
-hpat1 369946 369950 GT_2 4
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hpat1 369965 369969 TC_2 4
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+hpat1 370001 370005 AA_2 4
hpat1 370007 370013 ATG_2 6
-hpat1 370073 370079 GT_3 6
-hpat1 370104 370108 TA_2 4
-hpat1 370150 370158 CTTT_2 8
-hpat1 370160 370164 CT_2 4
+hpat1 370015 370019 CC_2 4
+hpat1 370040 370044 CC_2 4
+hpat1 370072 370078 TG_3 6
+hpat1 370081 370093 ATTAGG_2 12
+hpat1 370103 370107 AT_2 4
+hpat1 370128 370132 AA_2 4
+hpat1 370143 370149 TT_3 6
+hpat1 370149 370157 TCTT_2 8
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hpat1 370170 370174 GA_2 4
hpat1 370175 370179 AG_2 4
hpat1 370184 370188 CT_2 4
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hpat1 370212 370216 GA_2 4
hpat1 370216 370220 TC_2 4
-hpat1 370299 370305 CAC_2 6
-hpat1 370334 370338 AG_2 4
+hpat1 370233 370237 CT_2 4
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+hpat1 370294 370302 GCAC_2 8
+hpat1 370318 370322 TT_2 4
+hpat1 370330 370336 TAG_2 6
+hpat1 370340 370344 GG_2 4
hpat1 370367 370371 TC_2 4
hpat1 370373 370377 TC_2 4
+hpat1 370384 370388 TG_2 4
hpat1 370390 370398 CTGC_2 8
hpat1 370439 370443 GC_2 4
-hpat1 370467 370471 CT_2 4
+hpat1 370466 370472 TC_3 6
hpat1 370473 370477 TG_2 4
+hpat1 370478 370484 AA_3 6
hpat1 370510 370514 TG_2 4
hpat1 370527 370533 CTC_2 6
hpat1 370538 370542 CT_2 4
hpat1 370548 370552 TG_2 4
+hpat1 370585 370591 CAG_2 6
+hpat1 370598 370602 CA_2 4
+hpat1 370618 370624 AGG_2 6
+hpat1 370640 370648 CCCT_2 8
+hpat1 370654 370658 AC_2 4
hpat1 370673 370677 AC_2 4
-hpat1 370690 370694 GT_2 4
+hpat1 370678 370682 AC_2 4
+hpat1 370689 370693 TG_2 4
+hpat1 370695 370701 CTA_2 6
hpat1 370704 370708 AT_2 4
+hpat1 370728 370732 GA_2 4
+hpat1 370754 370758 GT_2 4
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+hpat1 370773 370777 AA_2 4
hpat1 370777 370781 TC_2 4
+hpat1 370799 370805 AGG_2 6
+hpat1 370806 370810 GA_2 4
+hpat1 370819 370823 GG_2 4
+hpat1 370830 370836 ACC_2 6
hpat1 370842 370846 AT_2 4
hpat1 370855 370859 AG_2 4
hpat1 370864 370868 CA_2 4
-hpat1 370877 370883 CTA_2 6
-hpat1 370899 370915 ATTT_4 16
+hpat1 370875 370879 CT_2 4
+hpat1 370891 370903 TTATTT_2 12
+hpat1 370903 370915 ATTT_3 12
hpat1 370917 370921 GA_2 4
hpat1 370931 370935 CT_2 4
hpat1 370959 370963 AC_2 4
hpat1 370965 370969 TC_2 4
+hpat1 370987 370993 CCT_2 6
hpat1 371005 371009 CT_2 4
hpat1 371045 371049 GT_2 4
+hpat1 371050 371056 CCA_2 6
+hpat1 371067 371071 TT_2 4
+hpat1 371076 371080 TT_2 4
hpat1 371083 371087 AG_2 4
+hpat1 371089 371093 GG_2 4
hpat1 371116 371120 TC_2 4
-hpat1 371142 371150 TGCC_2 8
-hpat1 371179 371183 TG_2 4
+hpat1 371140 371148 CCTG_2 8
+hpat1 371178 371182 GT_2 4
+hpat1 371185 371191 CCA_2 6
+hpat1 371202 371218 TT_8 16
+hpat1 371221 371225 TT_2 4
+hpat1 371228 371236 TT_4 8
+hpat1 371250 371254 TC_2 4
+hpat1 371266 371270 GG_2 4
hpat1 371275 371281 GCA_2 6
+hpat1 371286 371290 TT_2 4
hpat1 371291 371297 CTT_2 6
+hpat1 371303 371307 CC_2 4
+hpat1 371313 371317 GG_2 4
+hpat1 371410 371418 ATGT_2 8
hpat1 371433 371439 GAT_2 6
hpat1 371444 371452 TGCT_2 8
hpat1 371459 371463 GA_2 4
@@ -13102,25 +25032,31 @@
hpat1 371522 371526 TC_2 4
hpat1 371527 371531 GT_2 4
hpat1 371533 371537 AC_2 4
-hpat1 371541 371547 TCT_2 6
-hpat1 371556 371560 TC_2 4
-hpat1 371578 371584 AG_3 6
-hpat1 371587 371591 TC_2 4
+hpat1 371540 371544 CT_2 4
+hpat1 371555 371561 CT_3 6
+hpat1 371565 371571 CCA_2 6
+hpat1 371577 371583 GA_3 6
+hpat1 371586 371592 CT_3 6
hpat1 371600 371604 AG_2 4
-hpat1 371614 371618 CT_2 4
+hpat1 371613 371617 TC_2 4
hpat1 371619 371623 TA_2 4
hpat1 371634 371638 CA_2 4
hpat1 371643 371647 TG_2 4
+hpat1 371648 371664 TT_8 16
hpat1 371665 371671 GA_3 6
hpat1 371678 371682 CT_2 4
hpat1 371705 371709 CA_2 4
-hpat1 371794 371800 ACC_2 6
-hpat1 371800 371804 AC_2 4
+hpat1 371792 371801 CCA_3 9
+hpat1 371814 371824 AA_5 10
+hpat1 371824 371832 TT_4 8
hpat1 371834 371838 AG_2 4
hpat1 371844 371848 TC_2 4
-hpat1 371930 371934 TG_2 4
+hpat1 371875 371879 TT_2 4
+hpat1 371896 371902 CCA_2 6
+hpat1 371929 371933 GT_2 4
+hpat1 371961 371965 TT_2 4
hpat1 372012 372018 CTG_2 6
-hpat1 372030 372034 CT_2 4
+hpat1 372029 372033 TC_2 4
hpat1 372046 372050 GT_2 4
hpat1 372054 372062 TGAA_2 8
hpat1 372069 372073 AT_2 4
@@ -13128,170 +25064,302 @@
hpat1 372081 372085 TG_2 4
hpat1 372092 372096 GA_2 4
hpat1 372108 372112 GA_2 4
+hpat1 372120 372124 TT_2 4
hpat1 372130 372134 TA_2 4
+hpat1 372135 372139 TT_2 4
hpat1 372150 372154 TG_2 4
+hpat1 372154 372158 TT_2 4
hpat1 372166 372174 TATT_2 8
+hpat1 372199 372203 AA_2 4
+hpat1 372206 372212 TT_3 6
hpat1 372213 372217 GA_2 4
hpat1 372218 372222 AG_2 4
hpat1 372227 372231 CT_2 4
hpat1 372246 372250 GT_2 4
hpat1 372255 372259 CA_2 4
hpat1 372260 372264 TC_2 4
+hpat1 372277 372281 CT_2 4
+hpat1 372282 372288 CCT_2 6
+hpat1 372301 372305 TC_2 4
hpat1 372343 372352 CAC_3 9
+hpat1 372362 372372 TT_5 10
hpat1 372415 372421 GTG_2 6
hpat1 372424 372428 TC_2 4
+hpat1 372439 372451 ACCTCC_2 12
+hpat1 372465 372469 TC_2 4
hpat1 372472 372476 TC_2 4
-hpat1 372542 372546 AG_2 4
+hpat1 372509 372515 CCA_2 6
+hpat1 372526 372530 TT_2 4
+hpat1 372534 372538 TT_2 4
+hpat1 372538 372544 TAG_2 6
+hpat1 372548 372552 GG_2 4
hpat1 372575 372579 TC_2 4
-hpat1 372600 372606 ACC_2 6
+hpat1 372598 372604 CCA_2 6
hpat1 372620 372626 TGC_2 6
hpat1 372659 372665 TGC_2 6
hpat1 372692 372696 GC_2 4
+hpat1 372705 372709 TT_2 4
+hpat1 372713 372719 TT_3 6
hpat1 372722 372726 AG_2 4
+hpat1 372822 372828 CCA_2 6
+hpat1 372865 372869 AA_2 4
hpat1 372870 372874 TA_2 4
hpat1 372897 372901 CA_2 4
+hpat1 372913 372917 AC_2 4
hpat1 372933 372939 AGG_2 6
hpat1 372956 372960 GA_2 4
+hpat1 372979 372983 GA_2 4
+hpat1 372983 372987 CC_2 4
hpat1 372989 372993 TC_2 4
+hpat1 373003 373011 AA_4 8
hpat1 373021 373027 CAT_2 6
hpat1 373031 373035 CA_2 4
+hpat1 373068 373074 GAA_2 6
+hpat1 373119 373123 AG_2 4
hpat1 373123 373127 TC_2 4
+hpat1 373137 373141 TG_2 4
hpat1 373150 373160 AG_5 10
hpat1 373162 373170 GATA_2 8
hpat1 373172 373180 CAAA_2 8
hpat1 373180 373188 TACA_2 8
hpat1 373188 373196 TA_4 8
hpat1 373198 373202 AT_2 4
-hpat1 373204 373212 AT_4 8
+hpat1 373203 373211 TA_4 8
+hpat1 373214 373218 TT_2 4
+hpat1 373224 373228 AA_2 4
hpat1 373229 373233 TA_2 4
-hpat1 373239 373243 TG_2 4
+hpat1 373238 373242 GT_2 4
+hpat1 373242 373248 GGT_2 6
hpat1 373250 373256 ACT_2 6
hpat1 373256 373260 AG_2 4
hpat1 373312 373316 GA_2 4
hpat1 373331 373335 TC_2 4
+hpat1 373337 373341 GG_2 4
+hpat1 373341 373355 AA_7 14
+hpat1 373357 373363 CCA_2 6
+hpat1 373364 373368 AA_2 4
hpat1 373374 373378 TA_2 4
hpat1 373378 373382 AC_2 4
hpat1 373389 373393 TG_2 4
hpat1 373397 373405 TCTT_2 8
hpat1 373405 373409 CT_2 4
+hpat1 373421 373425 GA_2 4
hpat1 373439 373445 TA_3 6
hpat1 373445 373449 GA_2 4
+hpat1 373461 373465 TT_2 4
hpat1 373472 373476 TG_2 4
hpat1 373483 373489 CTG_2 6
hpat1 373495 373499 TA_2 4
hpat1 373501 373507 ATG_2 6
+hpat1 373507 373511 TT_2 4
hpat1 373540 373544 AT_2 4
+hpat1 373551 373555 TT_2 4
hpat1 373563 373567 AC_2 4
hpat1 373571 373575 CT_2 4
hpat1 373591 373595 TA_2 4
-hpat1 373609 373613 GA_2 4
+hpat1 373600 373606 TT_3 6
+hpat1 373606 373610 TG_2 4
+hpat1 373643 373647 GG_2 4
hpat1 373660 373664 AT_2 4
-hpat1 373682 373688 CA_3 6
+hpat1 373676 373680 TT_2 4
+hpat1 373681 373689 AC_4 8
+hpat1 373699 373703 CC_2 4
hpat1 373704 373708 TA_2 4
hpat1 373710 373716 TGT_2 6
hpat1 373724 373730 TCC_2 6
+hpat1 373733 373739 CAG_2 6
+hpat1 373744 373750 AGG_2 6
+hpat1 373752 373758 CCA_2 6
hpat1 373763 373767 TC_2 4
+hpat1 373777 373781 TT_2 4
hpat1 373781 373785 CT_2 4
+hpat1 373787 373791 TT_2 4
+hpat1 373807 373811 CC_2 4
+hpat1 373815 373821 GCT_2 6
+hpat1 373841 373847 GAA_2 6
+hpat1 373850 373862 GTTGGA_2 12
hpat1 373881 373891 CGTCC_2 10
+hpat1 373911 373915 CC_2 4
+hpat1 373926 373932 CC_3 6
+hpat1 373941 373945 CC_2 4
hpat1 373975 373981 CTG_2 6
hpat1 374011 374017 TCC_2 6
hpat1 374025 374031 GAG_2 6
-hpat1 374033 374041 CGGG_2 8
+hpat1 374031 374039 GGCG_2 8
hpat1 374076 374080 TA_2 4
+hpat1 374101 374107 GGC_2 6
+hpat1 374110 374114 CC_2 4
hpat1 374117 374123 CAC_2 6
hpat1 374123 374129 AGG_2 6
+hpat1 374136 374142 AGG_2 6
hpat1 374165 374169 AG_2 4
-hpat1 374182 374190 CATT_2 8
-hpat1 374193 374197 GT_2 4
+hpat1 374180 374188 TTCA_2 8
+hpat1 374192 374196 TG_2 4
+hpat1 374206 374210 GG_2 4
+hpat1 374224 374228 CC_2 4
hpat1 374243 374249 AG_3 6
hpat1 374256 374260 AG_2 4
hpat1 374260 374266 GTC_2 6
+hpat1 374274 374278 GG_2 4
hpat1 374283 374287 CA_2 4
hpat1 374301 374305 GT_2 4
hpat1 374311 374317 TGC_2 6
+hpat1 374318 374322 GG_2 4
+hpat1 374341 374345 GC_2 4
+hpat1 374347 374351 AA_2 4
+hpat1 374382 374386 GA_2 4
hpat1 374394 374402 GCAG_2 8
+hpat1 374402 374406 GG_2 4
+hpat1 374427 374431 AA_2 4
+hpat1 374435 374439 GG_2 4
hpat1 374449 374453 AG_2 4
-hpat1 374467 374471 CT_2 4
+hpat1 374457 374461 AA_2 4
+hpat1 374466 374470 TC_2 4
+hpat1 374470 374474 TG_2 4
hpat1 374477 374481 AG_2 4
-hpat1 374484 374488 AG_2 4
+hpat1 374483 374487 GA_2 4
hpat1 374490 374494 TG_2 4
-hpat1 374521 374527 CAG_2 6
+hpat1 374500 374504 GG_2 4
+hpat1 374507 374511 GA_2 4
+hpat1 374520 374526 GCA_2 6
+hpat1 374539 374543 GT_2 4
+hpat1 374549 374553 GG_2 4
hpat1 374565 374569 TG_2 4
hpat1 374590 374594 CA_2 4
hpat1 374594 374598 AG_2 4
+hpat1 374621 374625 AA_2 4
+hpat1 374659 374663 GG_2 4
+hpat1 374666 374670 TT_2 4
hpat1 374685 374689 GA_2 4
+hpat1 374698 374702 GA_2 4
hpat1 374719 374723 CA_2 4
+hpat1 374743 374747 GG_2 4
+hpat1 374755 374759 GG_2 4
+hpat1 374762 374766 AA_2 4
+hpat1 374811 374815 CC_2 4
hpat1 374835 374839 AC_2 4
+hpat1 374855 374861 AAG_2 6
hpat1 374863 374867 AG_2 4
hpat1 374869 374873 GA_2 4
+hpat1 374875 374879 AA_2 4
hpat1 374880 374884 GT_2 4
hpat1 374900 374904 TG_2 4
hpat1 374915 374921 ATG_2 6
hpat1 374929 374933 GT_2 4
hpat1 374934 374938 CA_2 4
hpat1 374939 374943 TC_2 4
+hpat1 374943 374947 TT_2 4
hpat1 374954 374958 AC_2 4
+hpat1 374967 374973 GGT_2 6
+hpat1 374982 374986 TG_2 4
+hpat1 374986 374990 CC_2 4
+hpat1 374990 374994 TT_2 4
hpat1 374994 375002 ATAG_2 8
hpat1 375005 375009 AC_2 4
hpat1 375010 375014 GA_2 4
+hpat1 375037 375041 CA_2 4
hpat1 375045 375049 AG_2 4
+hpat1 375052 375058 GGT_2 6
hpat1 375061 375065 AG_2 4
hpat1 375079 375085 AGG_2 6
hpat1 375093 375099 AG_3 6
hpat1 375102 375106 TG_2 4
hpat1 375127 375133 CA_3 6
-hpat1 375197 375201 AG_2 4
+hpat1 375151 375159 GGCA_2 8
+hpat1 375175 375179 GG_2 4
+hpat1 375196 375200 GA_2 4
+hpat1 375205 375209 GG_2 4
hpat1 375229 375233 CA_2 4
hpat1 375233 375237 GA_2 4
-hpat1 375255 375261 TCC_2 6
+hpat1 375253 375262 CCT_3 9
+hpat1 375262 375266 GG_2 4
hpat1 375266 375275 CAG_3 9
hpat1 375282 375286 CT_2 4
hpat1 375292 375296 AG_2 4
+hpat1 375310 375314 GG_2 4
+hpat1 375334 375338 CC_2 4
+hpat1 375352 375356 CT_2 4
+hpat1 375356 375360 TG_2 4
hpat1 375360 375364 CA_2 4
hpat1 375366 375370 TC_2 4
hpat1 375372 375376 GC_2 4
hpat1 375405 375409 CT_2 4
+hpat1 375413 375417 CC_2 4
hpat1 375422 375428 GCA_2 6
hpat1 375429 375433 CA_2 4
hpat1 375435 375439 CT_2 4
-hpat1 375499 375503 AG_2 4
+hpat1 375453 375457 GG_2 4
+hpat1 375473 375477 AG_2 4
+hpat1 375498 375504 GA_3 6
hpat1 375505 375509 GC_2 4
hpat1 375517 375521 CA_2 4
+hpat1 375531 375535 TC_2 4
+hpat1 375549 375553 AA_2 4
+hpat1 375571 375575 CC_2 4
hpat1 375583 375587 TG_2 4
-hpat1 375614 375618 AC_2 4
+hpat1 375613 375617 CA_2 4
+hpat1 375627 375631 TT_2 4
hpat1 375638 375644 GT_3 6
-hpat1 375696 375700 CA_2 4
+hpat1 375653 375657 AA_2 4
+hpat1 375657 375661 TT_2 4
+hpat1 375695 375699 AC_2 4
hpat1 375736 375740 TG_2 4
+hpat1 375743 375749 AA_3 6
hpat1 375753 375763 GTTCT_2 10
+hpat1 375785 375789 GA_2 4
hpat1 375794 375798 AC_2 4
+hpat1 375815 375819 AA_2 4
hpat1 375822 375826 GT_2 4
-hpat1 375838 375842 CG_2 4
+hpat1 375837 375841 GC_2 4
hpat1 375848 375852 CA_2 4
hpat1 375911 375915 GA_2 4
+hpat1 375951 375955 AA_2 4
+hpat1 375959 375965 AA_3 6
hpat1 375976 375982 TGG_2 6
+hpat1 375984 375988 GG_2 4
hpat1 376007 376011 GA_2 4
+hpat1 376022 376026 GA_2 4
hpat1 376027 376031 TC_2 4
+hpat1 376040 376052 GGAGGT_2 12
hpat1 376063 376067 GA_2 4
hpat1 376068 376072 CA_2 4
hpat1 376092 376098 CAA_2 6
+hpat1 376102 376106 AA_2 4
hpat1 376111 376115 TC_2 4
+hpat1 376115 376121 AA_3 6
+hpat1 376123 376129 AA_3 6
+hpat1 376137 376141 AA_2 4
hpat1 376155 376163 TCTT_2 8
-hpat1 376242 376246 AG_2 4
+hpat1 376195 376199 AT_2 4
+hpat1 376241 376245 GA_2 4
hpat1 376247 376251 AG_2 4
hpat1 376277 376281 TG_2 4
hpat1 376312 376324 TGAA_3 12
hpat1 376327 376335 GTGG_2 8
+hpat1 376339 376343 AG_2 4
hpat1 376352 376356 TG_2 4
hpat1 376360 376366 TGA_2 6
hpat1 376383 376389 CAT_2 6
+hpat1 376403 376409 TCC_2 6
+hpat1 376414 376418 TG_2 4
+hpat1 376423 376427 TT_2 4
+hpat1 376448 376452 TT_2 4
hpat1 376474 376478 AT_2 4
+hpat1 376491 376495 AG_2 4
hpat1 376495 376499 CA_2 4
+hpat1 376502 376506 AA_2 4
hpat1 376523 376527 CA_2 4
+hpat1 376560 376566 GGA_2 6
hpat1 376586 376590 GA_2 4
hpat1 376604 376610 ATG_2 6
+hpat1 376613 376617 CC_2 4
hpat1 376618 376622 TC_2 4
+hpat1 376626 376630 AA_2 4
+hpat1 376634 376638 AA_2 4
hpat1 376656 376660 CA_2 4
hpat1 376677 376681 AC_2 4
+hpat1 376682 376686 GG_2 4
+hpat1 376696 376700 GA_2 4
hpat1 376713 376719 AGG_2 6
hpat1 376737 376741 GA_2 4
hpat1 376743 376747 GC_2 4
@@ -13303,126 +25371,236 @@
hpat1 376844 376848 TC_2 4
hpat1 376861 376869 GCTG_2 8
hpat1 376869 376873 TG_2 4
-hpat1 376876 376880 TC_2 4
+hpat1 376875 376879 CT_2 4
+hpat1 376895 376899 AA_2 4
+hpat1 376919 376923 TA_2 4
hpat1 376959 376963 GC_2 4
hpat1 376979 376983 CA_2 4
hpat1 376988 376992 GT_2 4
hpat1 377005 377009 TG_2 4
+hpat1 377043 377047 CC_2 4
hpat1 377050 377054 TG_2 4
+hpat1 377057 377061 AC_2 4
hpat1 377065 377069 CT_2 4
+hpat1 377072 377076 CA_2 4
+hpat1 377077 377081 GT_2 4
+hpat1 377082 377086 CC_2 4
hpat1 377118 377124 CG_3 6
+hpat1 377128 377132 CC_2 4
hpat1 377134 377138 CA_2 4
hpat1 377142 377146 TG_2 4
+hpat1 377164 377172 CTGG_2 8
hpat1 377179 377185 CTC_2 6
+hpat1 377191 377195 TT_2 4
+hpat1 377209 377213 GG_2 4
hpat1 377218 377222 CA_2 4
hpat1 377234 377240 GCC_2 6
+hpat1 377248 377260 CCTGAG_2 12
hpat1 377269 377273 CT_2 4
+hpat1 377296 377300 GC_2 4
hpat1 377331 377335 TC_2 4
hpat1 377339 377343 TG_2 4
hpat1 377365 377369 GA_2 4
hpat1 377374 377378 GT_2 4
hpat1 377380 377384 TC_2 4
hpat1 377384 377388 AG_2 4
+hpat1 377389 377393 CC_2 4
+hpat1 377396 377400 CA_2 4
hpat1 377401 377407 AC_3 6
+hpat1 377410 377414 GG_2 4
hpat1 377421 377427 ATG_2 6
hpat1 377427 377433 GA_3 6
-hpat1 377492 377498 AGC_2 6
+hpat1 377466 377472 AAG_2 6
+hpat1 377475 377479 GA_2 4
+hpat1 377491 377497 CAG_2 6
+hpat1 377497 377501 CC_2 4
hpat1 377514 377518 GA_2 4
hpat1 377518 377522 AG_2 4
+hpat1 377580 377588 GGTG_2 8
hpat1 377610 377614 GA_2 4
hpat1 377642 377646 TC_2 4
+hpat1 377650 377654 AA_2 4
+hpat1 377658 377662 AA_2 4
hpat1 377671 377675 GT_2 4
-hpat1 377682 377686 CA_2 4
+hpat1 377679 377683 GC_2 4
+hpat1 377683 377687 AC_2 4
hpat1 377702 377706 CT_2 4
+hpat1 377720 377724 GA_2 4
hpat1 377794 377798 AG_2 4
hpat1 377799 377803 GA_2 4
hpat1 377808 377812 TC_2 4
+hpat1 377812 377826 AA_7 14
+hpat1 377840 377844 CT_2 4
+hpat1 377850 377854 CC_2 4
hpat1 377877 377881 GA_2 4
hpat1 377881 377885 TG_2 4
hpat1 377892 377898 TAG_2 6
+hpat1 377920 377924 CA_2 4
+hpat1 377953 377957 AC_2 4
+hpat1 377970 377976 TTA_2 6
+hpat1 377977 377981 CC_2 4
hpat1 377981 377985 AT_2 4
hpat1 378005 378011 AG_3 6
hpat1 378052 378056 AG_2 4
hpat1 378083 378087 AG_2 4
hpat1 378113 378117 GA_2 4
+hpat1 378121 378125 GG_2 4
+hpat1 378126 378134 CTGG_2 8
hpat1 378161 378165 GT_2 4
hpat1 378165 378169 CT_2 4
+hpat1 378180 378184 TC_2 4
+hpat1 378195 378199 AA_2 4
+hpat1 378215 378219 GT_2 4
+hpat1 378236 378240 CA_2 4
+hpat1 378243 378247 AA_2 4
+hpat1 378261 378265 CC_2 4
hpat1 378265 378269 AC_2 4
+hpat1 378276 378280 TT_2 4
hpat1 378281 378285 TG_2 4
hpat1 378290 378294 GA_2 4
+hpat1 378302 378306 TT_2 4
+hpat1 378311 378315 AA_2 4
hpat1 378319 378327 CTTC_2 8
+hpat1 378348 378360 TT_6 12
hpat1 378365 378369 GA_2 4
hpat1 378370 378374 AG_2 4
hpat1 378374 378378 TC_2 4
hpat1 378379 378383 CT_2 4
-hpat1 378407 378411 CG_2 4
-hpat1 378431 378437 CTG_2 6
+hpat1 378406 378410 GC_2 4
+hpat1 378429 378433 CT_2 4
hpat1 378455 378463 GCCT_2 8
hpat1 378494 378498 GC_2 4
+hpat1 378514 378520 TT_3 6
+hpat1 378527 378533 TAG_2 6
+hpat1 378537 378541 GG_2 4
+hpat1 378541 378545 TT_2 4
hpat1 378571 378575 CT_2 4
hpat1 378591 378599 GCCT_2 8
-hpat1 378627 378631 TG_2 4
+hpat1 378626 378630 GT_2 4
+hpat1 378659 378663 AA_2 4
+hpat1 378664 378668 TT_2 4
+hpat1 378669 378673 AA_2 4
+hpat1 378682 378686 GG_2 4
hpat1 378694 378700 AG_3 6
-hpat1 378717 378721 TC_2 4
+hpat1 378705 378711 CCT_2 6
+hpat1 378716 378720 CT_2 4
+hpat1 378730 378734 GG_2 4
hpat1 378744 378748 TG_2 4
hpat1 378774 378778 AC_2 4
+hpat1 378783 378787 TT_2 4
hpat1 378788 378792 TG_2 4
hpat1 378792 378796 GA_2 4
hpat1 378801 378805 GT_2 4
+hpat1 378807 378811 CC_2 4
+hpat1 378817 378821 TT_2 4
+hpat1 378821 378827 AA_3 6
+hpat1 378828 378832 TT_2 4
+hpat1 378840 378846 AAT_2 6
+hpat1 378853 378857 TT_2 4
+hpat1 378859 378863 AA_2 4
+hpat1 378868 378872 AA_2 4
+hpat1 378881 378885 AG_2 4
hpat1 378892 378896 AT_2 4
hpat1 378909 378913 CT_2 4
+hpat1 378922 378926 AC_2 4
+hpat1 378968 378972 CA_2 4
hpat1 378972 378980 GATT_2 8
+hpat1 379003 379007 AC_2 4
hpat1 379014 379018 TG_2 4
hpat1 379045 379051 TCA_2 6
hpat1 379064 379068 TC_2 4
hpat1 379077 379081 GA_2 4
hpat1 379124 379128 AC_2 4
+hpat1 379128 379140 TT_6 12
hpat1 379140 379144 GA_2 4
hpat1 379149 379153 TC_2 4
hpat1 379154 379158 CT_2 4
hpat1 379178 379184 GTG_2 6
hpat1 379188 379192 CA_2 4
hpat1 379227 379233 TCC_2 6
+hpat1 379241 379247 CCT_2 6
hpat1 379248 379254 AGT_2 6
-hpat1 379266 379272 TG_3 6
+hpat1 379265 379271 GT_3 6
+hpat1 379272 379282 CCACC_2 10
hpat1 379291 379295 GA_2 4
+hpat1 379296 379300 GG_2 4
hpat1 379323 379327 TC_2 4
hpat1 379348 379356 CTGC_2 8
+hpat1 379367 379371 AA_2 4
+hpat1 379380 379384 TA_2 4
hpat1 379415 379419 GA_2 4
+hpat1 379420 379424 TT_2 4
+hpat1 379426 379430 AG_2 4
+hpat1 379467 379475 TTGA_2 8
+hpat1 379477 379481 TT_2 4
hpat1 379483 379487 CA_2 4
-hpat1 379522 379526 CA_2 4
+hpat1 379506 379510 TT_2 4
+hpat1 379517 379523 AAC_2 6
+hpat1 379537 379541 CC_2 4
hpat1 379541 379545 TC_2 4
hpat1 379545 379549 CA_2 4
hpat1 379551 379555 AT_2 4
-hpat1 379558 379562 GA_2 4
-hpat1 379631 379635 CT_2 4
+hpat1 379557 379561 AG_2 4
+hpat1 379630 379634 TC_2 4
+hpat1 379678 379682 GG_2 4
hpat1 379696 379700 AT_2 4
+hpat1 379702 379706 AT_2 4
+hpat1 379710 379714 TT_2 4
+hpat1 379735 379739 TT_2 4
hpat1 379739 379745 AGC_2 6
hpat1 379745 379753 CATC_2 8
hpat1 379758 379762 TA_2 4
-hpat1 379768 379774 ATT_2 6
-hpat1 379774 379780 GTG_2 6
+hpat1 379766 379772 TTA_2 6
+hpat1 379773 379777 TG_2 4
+hpat1 379795 379799 TT_2 4
hpat1 379799 379811 CTTTTT_2 12
-hpat1 379814 379826 CTTT_3 12
+hpat1 379811 379823 TTTC_3 12
+hpat1 379823 379839 TT_8 16
hpat1 379839 379843 GA_2 4
hpat1 379844 379848 AG_2 4
hpat1 379848 379852 TC_2 4
hpat1 379853 379857 CT_2 4
hpat1 379886 379890 TC_2 4
+hpat1 379901 379913 ACCTCC_2 12
+hpat1 379927 379931 TC_2 4
+hpat1 379941 379945 CT_2 4
hpat1 379947 379953 AGC_2 6
hpat1 379965 379971 CA_3 6
-hpat1 379976 379980 AC_2 4
-hpat1 380004 380008 AG_2 4
+hpat1 379971 379977 CCA_2 6
+hpat1 379988 379992 TT_2 4
+hpat1 379996 380000 TT_2 4
+hpat1 380000 380006 TAG_2 6
+hpat1 380010 380014 GG_2 4
+hpat1 380014 380018 TT_2 4
hpat1 380037 380041 TC_2 4
hpat1 380048 380056 GCCT_2 8
+hpat1 380078 380082 TA_2 4
hpat1 380095 380099 GC_2 4
+hpat1 380103 380107 CC_2 4
+hpat1 380116 380120 TT_2 4
+hpat1 380126 380130 AT_2 4
+hpat1 380141 380145 TT_2 4
hpat1 380145 380149 AT_2 4
-hpat1 380218 380222 CA_2 4
+hpat1 380164 380170 TT_3 6
+hpat1 380171 380177 AAG_2 6
+hpat1 380184 380188 TA_2 4
+hpat1 380188 380194 ATG_2 6
+hpat1 380217 380221 AC_2 4
+hpat1 380222 380226 TT_2 4
+hpat1 380248 380252 CC_2 4
+hpat1 380255 380261 CCT_2 6
+hpat1 380261 380267 GGA_2 6
hpat1 380283 380287 CT_2 4
-hpat1 380311 380315 AC_2 4
+hpat1 380291 380297 AAG_2 6
+hpat1 380310 380314 CA_2 4
hpat1 380346 380352 AGG_2 6
-hpat1 380390 380394 CA_2 4
-hpat1 380436 380440 TG_2 4
+hpat1 380389 380393 AC_2 4
+hpat1 380395 380399 AA_2 4
+hpat1 380399 380403 CC_2 4
+hpat1 380411 380417 AA_3 6
+hpat1 380419 380423 TA_2 4
+hpat1 380423 380427 AA_2 4
+hpat1 380435 380439 GT_2 4
hpat1 380446 380450 CA_2 4
hpat1 380452 380456 TG_2 4
hpat1 380482 380488 AGG_2 6
@@ -13430,105 +25608,196 @@
hpat1 380558 380562 AG_2 4
hpat1 380563 380567 GA_2 4
hpat1 380572 380576 TC_2 4
+hpat1 380581 380589 AA_4 8
+hpat1 380590 380602 AA_6 12
+hpat1 380603 380607 AA_2 4
hpat1 380609 380613 CA_2 4
hpat1 380614 380618 GA_2 4
hpat1 380627 380633 AGA_2 6
+hpat1 380645 380653 TAGA_2 8
hpat1 380655 380659 TG_2 4
hpat1 380677 380683 CTT_2 6
+hpat1 380689 380693 TT_2 4
+hpat1 380715 380723 CCTG_2 8
+hpat1 380732 380738 TTC_2 6
+hpat1 380744 380748 AA_2 4
hpat1 380753 380759 TAA_2 6
hpat1 380764 380768 AC_2 4
+hpat1 380775 380779 CC_2 4
hpat1 380785 380789 TG_2 4
+hpat1 380811 380815 TG_2 4
hpat1 380827 380831 AC_2 4
-hpat1 380851 380857 GAA_2 6
+hpat1 380849 380855 AAG_2 6
hpat1 380901 380905 AG_2 4
hpat1 380917 380923 GTT_2 6
hpat1 380948 380954 AC_3 6
+hpat1 380954 380968 TT_7 14
hpat1 380969 380973 GA_2 4
hpat1 380978 380982 TC_2 4
hpat1 380983 380987 CT_2 4
-hpat1 381011 381015 CG_2 4
+hpat1 381010 381014 GC_2 4
hpat1 381016 381020 TC_2 4
+hpat1 381038 381044 CCT_2 6
hpat1 381055 381059 AT_2 4
+hpat1 381119 381123 TT_2 4
+hpat1 381127 381133 TT_3 6
hpat1 381135 381139 AG_2 4
+hpat1 381144 381148 TT_2 4
hpat1 381152 381156 GT_2 4
-hpat1 381242 381246 GC_2 4
+hpat1 381193 381197 CC_2 4
+hpat1 381241 381245 CG_2 4
hpat1 381254 381260 AC_3 6
-hpat1 381288 381292 GT_2 4
+hpat1 381260 381270 TT_5 10
+hpat1 381287 381291 TG_2 4
+hpat1 381291 381297 TT_3 6
hpat1 381297 381301 AT_2 4
-hpat1 381361 381365 CT_2 4
+hpat1 381314 381318 AT_2 4
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+hpat1 381327 381331 GG_2 4
+hpat1 381334 381338 TT_2 4
+hpat1 381342 381346 AA_2 4
+hpat1 381360 381364 TC_2 4
+hpat1 381366 381370 GG_2 4
+hpat1 381370 381374 AA_2 4
hpat1 381383 381387 TG_2 4
+hpat1 381408 381416 GGGT_2 8
hpat1 381416 381420 CA_2 4
hpat1 381427 381431 CT_2 4
hpat1 381439 381447 GCCA_2 8
+hpat1 381451 381461 TCCCA_2 10
hpat1 381469 381473 CT_2 4
+hpat1 381481 381485 AA_2 4
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hpat1 381511 381519 TAGA_2 8
-hpat1 381560 381564 CA_2 4
-hpat1 381594 381598 GT_2 4
+hpat1 381559 381563 AC_2 4
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hpat1 381612 381616 GC_2 4
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hpat1 381623 381627 GA_2 4
hpat1 381634 381638 CA_2 4
-hpat1 381648 381652 CT_2 4
-hpat1 381695 381699 GA_2 4
-hpat1 381709 381713 TC_2 4
+hpat1 381647 381653 TC_3 6
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+hpat1 381662 381670 CCTG_2 8
+hpat1 381694 381700 AG_3 6
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hpat1 381740 381744 CT_2 4
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hpat1 381789 381793 CT_2 4
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+hpat1 381813 381819 CT_3 6
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hpat1 381858 381862 CA_2 4
-hpat1 381872 381876 GT_2 4
+hpat1 381871 381875 TG_2 4
+hpat1 381887 381893 CAG_2 6
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+hpat1 381929 381933 GG_2 4
hpat1 381933 381939 TGG_2 6
+hpat1 381942 381946 GG_2 4
+hpat1 381974 381978 TC_2 4
+hpat1 381990 381996 GAA_2 6
+hpat1 382006 382010 GA_2 4
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hpat1 382042 382048 GAT_2 6
hpat1 382052 382056 TG_2 4
hpat1 382065 382069 CG_2 4
hpat1 382090 382094 GA_2 4
-hpat1 382156 382160 CT_2 4
+hpat1 382153 382157 GC_2 4
+hpat1 382170 382178 GGCC_2 8
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hpat1 382210 382214 CT_2 4
-hpat1 382256 382260 TC_2 4
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+hpat1 382231 382235 GG_2 4
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hpat1 382317 382321 CA_2 4
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hpat1 382331 382337 TCC_2 6
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hpat1 382389 382393 TC_2 4
-hpat1 382447 382453 GAG_2 6
+hpat1 382407 382413 GGT_2 6
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hpat1 382459 382463 AG_2 4
hpat1 382484 382490 ACC_2 6
hpat1 382490 382496 CTA_2 6
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hpat1 382607 382613 TG_3 6
hpat1 382615 382619 GT_2 4
hpat1 382621 382625 TG_2 4
hpat1 382626 382630 AC_2 4
-hpat1 382644 382650 AC_3 6
+hpat1 382643 382651 CA_4 8
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hpat1 382709 382715 CAG_2 6
+hpat1 382724 382728 GA_2 4
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hpat1 382742 382746 CA_2 4
hpat1 382746 382750 GA_2 4
hpat1 382774 382780 ACA_2 6
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hpat1 382807 382811 AC_2 4
hpat1 382816 382820 AC_2 4
hpat1 382829 382833 GT_2 4
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hpat1 382886 382890 CA_2 4
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hpat1 382925 382929 AG_2 4
hpat1 382944 382948 TG_2 4
-hpat1 382964 382968 TC_2 4
+hpat1 382963 382967 CT_2 4
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hpat1 382998 383002 CT_2 4
hpat1 383008 383012 TG_2 4
hpat1 383021 383025 TC_2 4
-hpat1 383040 383044 GA_2 4
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hpat1 383078 383082 AG_2 4
+hpat1 383160 383164 GG_2 4
hpat1 383215 383219 TG_2 4
hpat1 383244 383248 CT_2 4
+hpat1 383251 383255 GG_2 4
hpat1 383255 383259 AC_2 4
+hpat1 383261 383265 GG_2 4
+hpat1 383267 383271 CA_2 4
hpat1 383285 383289 CT_2 4
+hpat1 383292 383296 TT_2 4
hpat1 383307 383315 GTAT_2 8
hpat1 383322 383326 TG_2 4
hpat1 383328 383334 TAA_2 6
-hpat1 383362 383366 CT_2 4
+hpat1 383336 383340 GA_2 4
+hpat1 383347 383353 AAT_2 6
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+hpat1 383361 383365 TC_2 4
+hpat1 383371 383377 TTC_2 6
hpat1 383392 383396 TC_2 4
+hpat1 383403 383407 TT_2 4
+hpat1 383417 383421 AA_2 4
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hpat1 383445 383449 AG_2 4
-hpat1 383451 383455 GT_2 4
-hpat1 383479 383483 GA_2 4
-hpat1 383536 383545 CAG_3 9
-hpat1 383547 383551 TC_2 4
+hpat1 383450 383454 TG_2 4
+hpat1 383476 383480 TG_2 4
+hpat1 383527 383533 TTC_2 6
+hpat1 383535 383544 GCA_3 9
+hpat1 383544 383548 GT_2 4
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hpat1 383582 383588 CAA_2 6
+hpat1 383595 383599 AT_2 4
hpat1 383603 383609 CA_3 6
+hpat1 383613 383619 AAG_2 6
hpat1 383620 383626 CAG_2 6
hpat1 383668 383672 GC_2 4
+hpat1 383679 383683 CC_2 4
hpat1 383685 383689 CT_2 4
hpat1 383703 383707 TC_2 4
hpat1 383719 383723 TC_2 4
@@ -13537,107 +25806,190 @@
hpat1 383745 383751 CAG_2 6
hpat1 383751 383755 GT_2 4
hpat1 383755 383759 CA_2 4
+hpat1 383763 383767 AG_2 4
hpat1 383777 383781 AG_2 4
hpat1 383781 383787 GAA_2 6
+hpat1 383791 383795 GG_2 4
hpat1 383800 383806 GTA_2 6
hpat1 383809 383813 GA_2 4
hpat1 383821 383825 CT_2 4
hpat1 383901 383905 CT_2 4
+hpat1 383915 383921 TTC_2 6
hpat1 383924 383928 TG_2 4
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hpat1 383959 383963 GA_2 4
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hpat1 383981 383985 TA_2 4
-hpat1 384003 384007 GC_2 4
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hpat1 384012 384018 ATA_2 6
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hpat1 384102 384106 CA_2 4
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hpat1 384151 384155 TC_2 4
-hpat1 384180 384184 AG_2 4
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hpat1 384191 384200 GTG_3 9
-hpat1 384310 384314 GA_2 4
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hpat1 384316 384320 GA_2 4
hpat1 384325 384329 TC_2 4
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+hpat1 384352 384356 CA_2 4
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+hpat1 384371 384377 GGA_2 6
hpat1 384390 384394 GC_2 4
-hpat1 384411 384415 AC_2 4
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hpat1 384416 384420 TC_2 4
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hpat1 384488 384492 AC_2 4
hpat1 384503 384509 CTC_2 6
hpat1 384532 384536 AT_2 4
-hpat1 384573 384581 GAGG_2 8
+hpat1 384539 384543 GG_2 4
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hpat1 384599 384603 TG_2 4
hpat1 384649 384653 GA_2 4
hpat1 384666 384672 ATC_2 6
hpat1 384734 384742 TAAA_2 8
-hpat1 384748 384752 GT_2 4
-hpat1 384758 384770 GTTT_3 12
-hpat1 384777 384783 GTT_2 6
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hpat1 384792 384796 GA_2 4
hpat1 384797 384801 AG_2 4
hpat1 384801 384805 TC_2 4
hpat1 384806 384810 CT_2 4
hpat1 384830 384836 GTG_2 6
-hpat1 384883 384895 CTTCTG_2 12
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hpat1 384928 384932 CG_2 4
hpat1 384937 384941 AC_2 4
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hpat1 384999 385003 TC_2 4
hpat1 385067 385073 GCC_2 6
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hpat1 385171 385175 TC_2 4
hpat1 385175 385179 TG_2 4
-hpat1 385210 385214 GT_2 4
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hpat1 385220 385224 TC_2 4
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hpat1 385283 385291 CTCC_2 8
hpat1 385298 385302 GT_2 4
hpat1 385310 385318 TACC_2 8
-hpat1 385388 385392 GA_2 4
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hpat1 385400 385406 CTC_2 6
hpat1 385464 385472 AG_4 8
hpat1 385473 385479 AGA_2 6
hpat1 385493 385497 CA_2 4
hpat1 385499 385503 AG_2 4
+hpat1 385503 385507 AA_2 4
hpat1 385510 385516 CTC_2 6
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hpat1 385553 385557 GC_2 4
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hpat1 385648 385656 AGGC_2 8
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hpat1 385711 385715 TC_2 4
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hpat1 385742 385748 GTG_2 6
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hpat1 385806 385812 AGG_2 6
hpat1 385813 385817 AG_2 4
hpat1 385837 385843 CAC_2 6
hpat1 385863 385867 AG_2 4
hpat1 385872 385876 CT_2 4
hpat1 385877 385881 TC_2 4
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hpat1 385885 385894 TAA_3 9
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hpat1 385907 385911 CT_2 4
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hpat1 385928 385934 CAC_2 6
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hpat1 385995 385999 TA_2 4
hpat1 385999 386003 AG_2 4
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hpat1 386028 386032 TA_2 4
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hpat1 386121 386127 ATT_2 6
hpat1 386143 386149 CAA_2 6
-hpat1 386167 386171 TA_2 4
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hpat1 386194 386198 TG_2 4
hpat1 386216 386220 CA_2 4
hpat1 386227 386231 AG_2 4
hpat1 386231 386239 GA_4 8
-hpat1 386276 386280 AT_2 4
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hpat1 386311 386315 TC_2 4
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hpat1 386334 386338 TA_2 4
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hpat1 386359 386363 CA_2 4
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hpat1 386385 386391 TG_3 6
-hpat1 386416 386420 AG_2 4
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hpat1 386462 386466 GC_2 4
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hpat1 386541 386547 CTT_2 6
hpat1 386547 386551 GT_2 4
hpat1 386586 386590 GT_2 4
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hpat1 386669 386675 CTG_2 6
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hpat1 386692 386698 AGT_2 6
-hpat1 386755 386763 GCAG_2 8
+hpat1 386706 386710 CT_2 4
+hpat1 386747 386759 CTGCAG_2 12
+hpat1 386759 386765 GCA_2 6
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hpat1 386796 386800 CT_2 4
hpat1 386800 386804 TC_2 4
+hpat1 386809 386813 CA_2 4
hpat1 386821 386827 TCC_2 6
hpat1 386843 386851 TCCT_2 8
hpat1 386852 386858 TGG_2 6
@@ -13647,755 +25999,1503 @@
hpat1 386898 386902 GT_2 4
hpat1 386915 386919 GT_2 4
hpat1 386925 386929 AT_2 4
-hpat1 386984 386988 CT_2 4
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hpat1 387010 387016 TG_3 6
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hpat1 387114 387120 TA_3 6
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hpat1 387133 387137 TA_2 4
hpat1 387137 387145 CATA_2 8
hpat1 387175 387179 CT_2 4
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hpat1 387207 387211 CA_2 4
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hpat1 387278 387282 GA_2 4
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hpat1 387310 387314 TC_2 4
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hpat1 387429 387433 GA_2 4
hpat1 387434 387438 CG_2 4
hpat1 387461 387465 AG_2 4
hpat1 387466 387470 GA_2 4
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hpat1 387540 387546 TGT_2 6
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hpat1 387563 387567 TG_2 4
hpat1 387568 387574 TC_3 6
-hpat1 387591 387601 GTACT_2 10
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hpat1 387612 387618 TGA_2 6
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hpat1 387640 387646 ATG_2 6
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hpat1 387691 387700 ACT_3 9
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hpat1 387792 387798 GAT_2 6
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hpat1 387856 387860 CA_2 4
hpat1 387888 387892 GA_2 4
-hpat1 387895 387901 CAT_2 6
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hpat1 387950 387962 TGGGGG_2 12
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hpat1 387976 387982 ACA_2 6
hpat1 387983 387987 GA_2 4
hpat1 387987 387991 TA_2 4
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hpat1 388072 388076 TC_2 4
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hpat1 388134 388138 AG_2 4
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+hpat1 388196 388208 GGAGGT_2 12
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hpat1 388267 388271 TC_2 4
hpat1 388305 388309 TC_2 4
hpat1 388310 388314 CT_2 4
hpat1 388334 388340 GTG_2 6
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hpat1 388456 388460 AG_2 4
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hpat1 388514 388520 TCC_2 6
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hpat1 388588 388592 TG_2 4
hpat1 388601 388605 TC_2 4
hpat1 388608 388616 CATC_2 8
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hpat1 388639 388643 AG_2 4
hpat1 388650 388656 TCC_2 6
hpat1 388664 388670 AG_3 6
hpat1 388714 388720 TGC_2 6
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hpat1 388751 388757 GAA_2 6
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hpat1 388792 388796 CT_2 4
hpat1 388796 388800 TC_2 4
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hpat1 388836 388840 TA_2 4
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hpat1 388846 388850 AC_2 4
hpat1 388853 388857 TG_2 4
hpat1 388867 388871 GC_2 4
hpat1 388872 388876 CA_2 4
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hpat1 388880 388888 AGGG_2 8
-hpat1 388974 388980 CT_3 6
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hpat1 388980 388984 TC_2 4
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hpat1 389017 389023 CAC_2 6
hpat1 389029 389033 GT_2 4
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hpat1 389072 389082 TGTTT_2 10
hpat1 389118 389122 AC_2 4
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hpat1 389162 389168 GTT_2 6
hpat1 389190 389194 AG_2 4
hpat1 389204 389208 AC_2 4
-hpat1 389221 389225 CA_2 4
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hpat1 389228 389232 CA_2 4
hpat1 389263 389269 ATC_2 6
-hpat1 389276 389280 AT_2 4
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hpat1 389314 389320 GCT_2 6
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hpat1 389367 389371 GT_2 4
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hpat1 389393 389397 GA_2 4
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hpat1 389448 389452 CT_2 4
hpat1 389457 389463 ATC_2 6
hpat1 389465 389469 CT_2 4
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hpat1 389474 389482 CAGC_2 8
hpat1 389497 389501 AC_2 4
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hpat1 389512 389516 TG_2 4
hpat1 389526 389530 TG_2 4
hpat1 389562 389568 CAC_2 6
hpat1 389573 389577 CA_2 4
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hpat1 389599 389605 TCC_2 6
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hpat1 389695 389701 GCT_2 6
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hpat1 389727 389731 TG_2 4
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hpat1 389785 389789 AT_2 4
-hpat1 389792 389800 TAAT_2 8
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hpat1 389828 389832 TG_2 4
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hpat1 389860 389864 AG_2 4
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hpat1 389906 389912 CA_3 6
hpat1 389931 389935 GA_2 4
hpat1 389958 389962 AG_2 4
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hpat1 390001 390005 CT_2 4
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hpat1 390025 390029 GA_2 4
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hpat1 390104 390110 ATA_2 6
hpat1 390113 390119 CAG_2 6
hpat1 390121 390127 TCA_2 6
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hpat1 390139 390145 ACA_2 6
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hpat1 390176 390180 AG_2 4
hpat1 390184 390188 TA_2 4
hpat1 390192 390198 TAT_2 6
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hpat1 390337 390341 TC_2 4
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hpat1 390371 390377 TGG_2 6
hpat1 390403 390409 AGG_2 6
-hpat1 390442 390446 AG_2 4
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hpat1 390459 390463 GA_2 4
hpat1 390471 390475 TC_2 4
hpat1 390488 390494 CAA_2 6
hpat1 390502 390506 CT_2 4
-hpat1 390539 390547 TAAA_2 8
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hpat1 390569 390573 TA_2 4
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hpat1 390584 390588 CA_2 4
hpat1 390590 390596 ACA_2 6
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hpat1 390623 390633 TAAAA_2 10
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hpat1 390663 390667 CA_2 4
hpat1 390673 390677 CA_2 4
hpat1 390707 390715 GTGG_2 8
hpat1 390736 390740 GA_2 4
hpat1 390768 390772 TC_2 4
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hpat1 390800 390806 GTG_2 6
hpat1 390810 390814 AC_2 4
hpat1 390832 390838 AGG_2 6
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hpat1 390871 390875 AG_2 4
hpat1 390918 390924 CAA_2 6
hpat1 390932 390936 CT_2 4
hpat1 390938 390974 CA_18 36
+hpat1 390984 390988 AA_2 4
hpat1 391010 391014 AT_2 4
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hpat1 391033 391037 GA_2 4
hpat1 391047 391051 AC_2 4
hpat1 391055 391059 CA_2 4
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hpat1 391083 391087 AC_2 4
hpat1 391091 391095 AC_2 4
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hpat1 391138 391142 CT_2 4
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hpat1 391153 391157 AG_2 4
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hpat1 391167 391171 AG_2 4
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hpat1 391188 391203 CAAAA_3 15
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hpat1 391214 391226 CAA_4 12
+hpat1 391226 391230 AA_2 4
hpat1 391230 391238 CAAA_2 8
hpat1 391245 391251 TAC_2 6
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hpat1 391321 391325 CA_2 4
hpat1 391331 391335 CA_2 4
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hpat1 391361 391365 GA_2 4
hpat1 391370 391374 TC_2 4
hpat1 391375 391379 CT_2 4
hpat1 391414 391418 CT_2 4
hpat1 391433 391437 CA_2 4
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hpat1 391462 391466 AG_2 4
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hpat1 391568 391572 TG_2 4
hpat1 391595 391599 TA_2 4
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hpat1 391606 391610 GA_2 4
hpat1 391610 391614 AG_2 4
hpat1 391621 391625 TA_2 4
hpat1 391625 391629 GA_2 4
hpat1 391636 391640 TA_2 4
-hpat1 391720 391732 CTTT_3 12
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+hpat1 391718 391730 TTCT_3 12
+hpat1 391730 391742 TT_6 12
hpat1 391747 391751 GA_2 4
hpat1 391752 391756 AG_2 4
hpat1 391756 391760 TC_2 4
hpat1 391761 391765 CT_2 4
hpat1 391794 391798 TC_2 4
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hpat1 391849 391853 CT_2 4
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hpat1 391945 391949 TC_2 4
-hpat1 391985 391989 TC_2 4
-hpat1 392008 392012 TG_2 4
-hpat1 392052 392058 TGA_2 6
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hpat1 392101 392105 TA_2 4
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hpat1 392129 392133 AT_2 4
-hpat1 392138 392142 AT_2 4
+hpat1 392137 392141 TA_2 4
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+hpat1 392157 392161 TA_2 4
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hpat1 392168 392174 CAG_2 6
hpat1 392187 392193 TGA_2 6
hpat1 392195 392199 TC_2 4
+hpat1 392211 392215 TA_2 4
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hpat1 392222 392228 CAG_2 6
hpat1 392241 392247 TGA_2 6
hpat1 392249 392253 TC_2 4
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hpat1 392350 392354 TC_2 4
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hpat1 392371 392375 TG_2 4
hpat1 392472 392478 CAA_2 6
hpat1 392491 392495 TC_2 4
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hpat1 392573 392577 TG_2 4
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hpat1 392636 392640 AT_2 4
hpat1 392653 392657 TG_2 4
hpat1 392673 392677 AC_2 4
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hpat1 392749 392757 ATAA_2 8
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hpat1 392791 392795 GA_2 4
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hpat1 392822 392826 TG_2 4
hpat1 392839 392845 GT_3 6
hpat1 392846 392850 TG_2 4
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hpat1 392963 392969 GT_3 6
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hpat1 393047 393051 AG_2 4
hpat1 393083 393087 TC_2 4
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hpat1 393103 393107 GA_2 4
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hpat1 393160 393164 CT_2 4
-hpat1 393202 393206 GA_2 4
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hpat1 393219 393228 AGG_3 9
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hpat1 393244 393248 GA_2 4
hpat1 393262 393274 TGGAGC_2 12
-hpat1 393287 393293 AGG_2 6
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hpat1 393301 393305 GA_2 4
hpat1 393329 393335 CTG_2 6
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hpat1 393368 393374 GCG_2 6
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hpat1 393435 393439 GA_2 4
hpat1 393521 393527 TCA_2 6
hpat1 393533 393537 AG_2 4
hpat1 393551 393555 TG_2 4
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hpat1 393662 393666 TG_2 4
-hpat1 393672 393678 GCC_2 6
-hpat1 393714 393726 CTCCTG_2 12
-hpat1 393749 393759 GCCCC_2 10
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+hpat1 393713 393725 GCTCCT_2 12
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hpat1 393780 393784 CG_2 4
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hpat1 393821 393825 CG_2 4
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hpat1 393862 393866 CG_2 4
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+hpat1 393880 393890 GCCCC_2 10
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hpat1 393906 393918 GCCCCG_2 12
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hpat1 393930 393934 CG_2 4
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hpat1 393953 393957 CT_2 4
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+hpat1 393993 393997 GG_2 4
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hpat1 394044 394048 GC_2 4
-hpat1 394079 394088 GCC_3 9
-hpat1 394172 394184 ACTTTC_2 12
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hpat1 394210 394216 GAA_2 6
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hpat1 394289 394295 TCC_2 6
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hpat1 394343 394349 CTT_2 6
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hpat1 394377 394381 GC_2 4
hpat1 394395 394399 TC_2 4
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hpat1 394454 394458 GT_2 4
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hpat1 394490 394498 CA_4 8
-hpat1 394509 394513 GC_2 4
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hpat1 394547 394551 TC_2 4
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hpat1 394587 394593 AGG_2 6
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hpat1 394617 394621 CA_2 4
hpat1 394637 394641 GA_2 4
hpat1 394658 394662 CA_2 4
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-hpat1 394774 394780 TCC_2 6
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hpat1 394815 394819 AG_2 4
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hpat1 394834 394838 GA_2 4
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hpat1 394861 394865 GA_2 4
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hpat1 394883 394887 AG_2 4
hpat1 394888 394892 AC_2 4
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hpat1 394921 394927 TGG_2 6
hpat1 394927 394931 GA_2 4
hpat1 394948 394952 GA_2 4
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-hpat1 395007 395015 GTCA_2 8
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hpat1 395046 395050 TG_2 4
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hpat1 395067 395071 AG_2 4
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hpat1 395090 395094 AT_2 4
hpat1 395121 395125 CT_2 4
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hpat1 395141 395149 CTTC_2 8
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hpat1 395185 395189 CT_2 4
hpat1 395206 395210 CT_2 4
hpat1 395226 395230 AC_2 4
-hpat1 395239 395245 CTC_2 6
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hpat1 395263 395267 GT_2 4
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hpat1 395278 395282 AG_2 4
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hpat1 395293 395297 TC_2 4
+hpat1 395340 395352 TT_6 12
hpat1 395373 395377 TC_2 4
-hpat1 395403 395407 AG_2 4
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hpat1 395423 395427 TC_2 4
hpat1 395427 395431 TG_2 4
hpat1 395451 395459 GTGG_2 8
hpat1 395459 395465 CA_3 6
+hpat1 395484 395490 TTG_2 6
+hpat1 395505 395509 AT_2 4
hpat1 395518 395530 TGGGAA_2 12
hpat1 395532 395540 ACAA_2 8
hpat1 395553 395557 GT_2 4
hpat1 395557 395566 GAG_3 9
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hpat1 395577 395581 AG_2 4
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hpat1 395649 395653 AG_2 4
-hpat1 395656 395662 GCA_2 6
-hpat1 395662 395668 CA_3 6
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hpat1 395696 395700 CT_2 4
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hpat1 395720 395724 TG_2 4
+hpat1 395735 395741 CTG_2 6
hpat1 395751 395757 CAG_2 6
-hpat1 395790 395798 CGGG_2 8
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hpat1 395818 395822 GT_2 4
hpat1 395827 395835 CTGG_2 8
hpat1 395836 395840 AG_2 4
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hpat1 395856 395860 GT_2 4
hpat1 395877 395881 TC_2 4
hpat1 395901 395907 GAG_2 6
hpat1 395911 395919 TGGC_2 8
hpat1 395933 395939 CAG_2 6
hpat1 395945 395949 AT_2 4
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hpat1 395993 395999 AGG_2 6
hpat1 396034 396038 TG_2 4
hpat1 396044 396048 AG_2 4
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hpat1 396067 396073 GT_3 6
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hpat1 396107 396111 TC_2 4
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hpat1 396122 396128 AGG_2 6
-hpat1 396156 396162 ACA_2 6
-hpat1 396162 396168 GAA_2 6
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hpat1 396240 396244 AG_2 4
hpat1 396248 396252 AT_2 4
-hpat1 396257 396261 CT_2 4
-hpat1 396273 396281 ATTC_2 8
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hpat1 396316 396324 TCCA_2 8
-hpat1 396327 396337 ATCAC_2 10
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hpat1 396337 396343 AGG_2 6
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hpat1 396355 396359 AC_2 4
-hpat1 396365 396369 AC_2 4
-hpat1 396369 396375 TCT_2 6
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hpat1 403640 403646 GCA_2 6
hpat1 403672 403676 GA_2 4
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hpat1 403734 403740 CTG_2 6
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hpat1 403813 403817 CT_2 4
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hpat1 403883 403887 AG_2 4
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hpat1 403916 403920 AG_2 4
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hpat1 403953 403957 AC_2 4
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hpat1 403987 403991 GA_2 4
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hpat1 404042 404048 TG_3 6
hpat1 404071 404077 CTG_2 6
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hpat1 404127 404131 GT_2 4
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hpat1 404227 404231 TG_2 4
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hpat1 404243 404247 TG_2 4
hpat1 404247 404255 CTTT_2 8
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hpat1 404263 404267 GA_2 4
hpat1 404272 404276 TC_2 4
hpat1 404277 404281 CT_2 4
hpat1 404305 404309 CA_2 4
hpat1 404310 404314 TC_2 4
-hpat1 404389 404397 CGCC_2 8
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hpat1 404418 404422 AT_2 4
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hpat1 404429 404433 AG_2 4
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hpat1 404446 404450 GT_2 4
hpat1 404462 404466 TC_2 4
hpat1 404468 404472 TC_2 4
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hpat1 404552 404560 CTTT_2 8
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hpat1 404574 404580 TA_3 6
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hpat1 404606 404610 GA_2 4
hpat1 404623 404629 ATG_2 6
hpat1 404629 404633 TC_2 4
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hpat1 404651 404655 GT_2 4
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hpat1 404697 404701 TA_2 4
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hpat1 404815 404821 CTG_2 6
hpat1 404826 404830 TC_2 4
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hpat1 404941 404945 CT_2 4
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hpat1 404969 404975 AGG_2 6
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-hpat1 405046 405058 ACCCTG_2 12
-hpat1 405110 405116 AGG_2 6
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hpat1 405116 405120 GA_2 4
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hpat1 405413 405417 CA_2 4
-hpat1 405466 405472 CAA_2 6
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hpat1 405477 405481 CG_2 4
hpat1 405488 405492 TG_2 4
hpat1 405495 405499 TG_2 4
-hpat1 405507 405511 CG_2 4
-hpat1 405551 405560 GAG_3 9
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hpat1 405563 405569 GC_3 6
-hpat1 405578 405587 GAG_3 9
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-hpat1 405675 405679 AC_2 4
+hpat1 405571 405579 GGCG_2 8
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+hpat1 405602 405608 CAG_2 6
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hpat1 405681 405685 GC_2 4
-hpat1 405691 405695 GC_2 4
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hpat1 405695 405699 CT_2 4
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hpat1 405726 405732 TGC_2 6
hpat1 405754 405758 TG_2 4
-hpat1 405766 405772 TC_3 6
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hpat1 405783 405787 TG_2 4
hpat1 405790 405794 GA_2 4
hpat1 405807 405811 TG_2 4
hpat1 405811 405815 GC_2 4
hpat1 405826 405830 CA_2 4
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hpat1 405850 405854 TG_2 4
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hpat1 405872 405878 AC_3 6
hpat1 405878 405882 CA_2 4
hpat1 405888 405896 TGGC_2 8
-hpat1 405943 405947 AC_2 4
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hpat1 405975 405979 TG_2 4
hpat1 406018 406022 CT_2 4
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hpat1 406071 406075 GA_2 4
hpat1 406075 406085 GCCTG_2 10
hpat1 406095 406099 GC_2 4
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hpat1 406159 406165 AC_3 6
hpat1 406174 406178 AC_2 4
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hpat1 406210 406214 TC_2 4
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hpat1 406249 406255 TGC_2 6
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hpat1 406281 406285 TC_2 4
hpat1 406287 406293 CTC_2 6
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hpat1 406369 406375 CAC_2 6
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hpat1 406415 406419 TC_2 4
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hpat1 406494 406504 GCCCC_2 10
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hpat1 406587 406591 TC_2 4
-hpat1 406627 406637 ATCCC_2 10
-hpat1 406679 406691 ATCCCC_2 12
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hpat1 406707 406711 TC_2 4
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hpat1 406831 406835 TG_2 4
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+hpat1 406921 406931 GCCCC_2 10
hpat1 406931 406935 GT_2 4
-hpat1 406946 406958 GCA_4 12
+hpat1 406945 406957 AGC_4 12
+hpat1 406957 406963 AGG_2 6
hpat1 406973 406979 GCA_2 6
hpat1 406993 406997 AG_2 4
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hpat1 407034 407038 GT_2 4
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hpat1 407067 407073 GTG_2 6
hpat1 407081 407085 GT_2 4
hpat1 407088 407092 CA_2 4
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hpat1 407145 407151 GCC_2 6
hpat1 407169 407177 GTGG_2 8
hpat1 407182 407186 TG_2 4
hpat1 407186 407190 CT_2 4
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hpat1 407234 407238 TC_2 4
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hpat1 407279 407283 GC_2 4
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hpat1 407306 407312 GA_3 6
hpat1 407312 407318 AGC_2 6
hpat1 407328 407332 GC_2 4
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hpat1 407367 407373 CGC_2 6
hpat1 407391 407397 GCT_2 6
hpat1 407408 407412 TG_2 4
hpat1 407432 407436 TC_2 4
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hpat1 407461 407465 TG_2 4
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hpat1 407482 407488 CAC_2 6
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hpat1 407504 407510 GCC_2 6
hpat1 407528 407536 TGCC_2 8
-hpat1 407557 407563 AG_3 6
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hpat1 407565 407571 TGA_2 6
-hpat1 407607 407611 GT_2 4
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hpat1 407618 407626 TACA_2 8
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hpat1 407656 407662 AG_3 6
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hpat1 407694 407698 AG_2 4
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hpat1 407730 407734 TG_2 4
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hpat1 407757 407763 GAG_2 6
hpat1 407764 407768 TC_2 4
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hpat1 407782 407786 AG_2 4
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hpat1 407803 407807 AG_2 4
hpat1 407813 407819 AG_3 6
hpat1 407819 407823 GT_2 4
hpat1 407833 407839 AGC_2 6
hpat1 407842 407848 GAG_2 6
-hpat1 407893 407899 CTG_2 6
+hpat1 407881 407885 GG_2 4
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hpat1 407903 407907 GA_2 4
hpat1 407911 407915 CT_2 4
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hpat1 407923 407931 GATG_2 8
hpat1 407944 407950 GAG_2 6
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hpat1 407976 407980 TG_2 4
hpat1 407991 407995 AG_2 4
hpat1 407999 408003 AG_2 4
hpat1 408046 408050 GA_2 4
-hpat1 408068 408072 AT_2 4
+hpat1 408056 408064 GGAA_2 8
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hpat1 408073 408079 GAG_2 6
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hpat1 408097 408105 TGAG_2 8
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hpat1 408128 408132 TG_2 4
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hpat1 408173 408177 CT_2 4
-hpat1 408184 408194 TCCCC_2 10
+hpat1 408179 408194 TCCCC_3 15
hpat1 408229 408235 AGG_2 6
hpat1 408241 408245 TC_2 4
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hpat1 408259 408265 ACA_2 6
hpat1 408284 408290 GCT_2 6
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hpat1 408369 408377 GCAG_2 8
hpat1 408383 408391 TCTT_2 8
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hpat1 408420 408424 TC_2 4
hpat1 408428 408434 TGT_2 6
hpat1 408443 408447 TC_2 4
hpat1 408467 408475 TCAT_2 8
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hpat1 408512 408516 TG_2 4
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hpat1 408523 408527 GA_2 4
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hpat1 408580 408588 GAAG_2 8
hpat1 408590 408596 CAG_2 6
hpat1 408597 408603 GTT_2 6
hpat1 408635 408639 CA_2 4
-hpat1 408746 408750 CG_2 4
+hpat1 408659 408665 GGA_2 6
+hpat1 408721 408727 AA_3 6
+hpat1 408732 408738 AA_3 6
+hpat1 408745 408749 GC_2 4
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hpat1 408757 408761 GC_2 4
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hpat1 408850 408854 TG_2 4
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hpat1 408884 408888 AG_2 4
hpat1 408889 408893 GA_2 4
+hpat1 408902 408908 AA_3 6
+hpat1 408910 408920 AA_5 10
hpat1 408932 408936 CT_2 4
hpat1 408942 408948 TGG_2 6
-hpat1 408954 408960 TG_3 6
+hpat1 408953 408959 GT_3 6
+hpat1 408962 408966 CA_2 4
hpat1 408972 408976 AT_2 4
-hpat1 408982 408986 TC_2 4
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+hpat1 408991 408995 CT_2 4
hpat1 408995 409005 ATCTC_2 10
hpat1 409009 409013 AG_2 4
hpat1 409015 409019 AG_2 4
@@ -14403,167 +27503,312 @@
hpat1 409061 409065 AT_2 4
hpat1 409065 409069 GT_2 4
hpat1 409079 409085 TAG_2 6
+hpat1 409094 409098 GC_2 4
hpat1 409121 409125 GC_2 4
hpat1 409168 409172 GA_2 4
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hpat1 409200 409204 TC_2 4
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hpat1 409262 409268 AGG_2 6
-hpat1 409308 409314 GTG_2 6
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hpat1 409318 409322 GA_2 4
hpat1 409323 409327 CG_2 4
hpat1 409352 409356 AG_2 4
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hpat1 409374 409388 TA_7 14
hpat1 409391 409395 AG_2 4
hpat1 409405 409409 CA_2 4
-hpat1 409421 409430 GTT_3 9
+hpat1 409419 409428 TTG_3 9
hpat1 409431 409435 GC_2 4
hpat1 409439 409443 TG_2 4
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hpat1 409525 409529 TG_2 4
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hpat1 409567 409571 AT_2 4
+hpat1 409577 409585 AA_4 8
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hpat1 409632 409636 TA_2 4
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hpat1 409655 409661 TAT_2 6
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hpat1 409673 409679 GAT_2 6
hpat1 409684 409688 GT_2 4
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hpat1 409732 409736 AT_2 4
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hpat1 409811 409815 TA_2 4
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hpat1 409921 409925 TC_2 4
hpat1 409928 409932 TG_2 4
+hpat1 409947 409951 GG_2 4
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hpat1 409969 409973 TC_2 4
-hpat1 410000 410010 TCATG_2 10
+hpat1 409975 409981 CCA_2 6
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+hpat1 410008 410014 TGG_2 6
hpat1 410014 410018 TC_2 4
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hpat1 410054 410058 TG_2 4
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hpat1 410088 410092 AC_2 4
hpat1 410126 410130 CA_2 4
hpat1 410147 410153 ACC_2 6
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hpat1 410158 410162 GT_2 4
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hpat1 410192 410198 CAC_2 6
hpat1 410211 410215 CA_2 4
hpat1 410221 410227 TG_3 6
hpat1 410236 410242 GT_3 6
-hpat1 410256 410260 CT_2 4
-hpat1 410281 410285 CT_2 4
-hpat1 410291 410297 CTG_2 6
+hpat1 410253 410257 GC_2 4
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hpat1 410301 410305 TC_2 4
hpat1 410311 410317 GTT_2 6
hpat1 410324 410328 TG_2 4
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hpat1 410385 410391 CTG_2 6
hpat1 410418 410422 TG_2 4
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hpat1 410476 410480 CA_2 4
hpat1 410481 410485 AC_2 4
-hpat1 410516 410522 TC_3 6
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+hpat1 410515 410521 CT_3 6
+hpat1 410527 410531 CC_2 4
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hpat1 410541 410545 GA_2 4
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hpat1 413939 413943 AT_2 4
hpat1 413965 413969 CT_2 4
hpat1 413980 413988 CTGA_2 8
@@ -14571,721 +27816,1333 @@
hpat1 414020 414024 TA_2 4
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hpat1 426503 426513 TCCCT_2 10
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hpat1 428586 428592 ACA_2 6
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hpat1 428672 428676 TG_2 4
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hpat1 428700 428704 GT_2 4
hpat1 428722 428726 GT_2 4
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hpat1 428739 428743 GA_2 4
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hpat1 429000 429004 TC_2 4
hpat1 429004 429010 TAA_2 6
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hpat1 429033 429039 GTG_2 6
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hpat1 429104 429108 AG_2 4
hpat1 429121 429125 GA_2 4
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hpat1 429151 429157 GA_3 6
hpat1 429168 429172 TC_2 4
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hpat1 429191 429197 GTA_2 6
hpat1 429200 429204 TG_2 4
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hpat1 429269 429277 AGTA_2 8
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hpat1 429432 429438 CTG_2 6
hpat1 429445 429451 TGC_2 6
hpat1 429451 429457 CAG_2 6
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hpat1 429487 429493 AGA_2 6
hpat1 429497 429501 CA_2 4
hpat1 429503 429507 CA_2 4
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hpat1 429674 429682 ATAA_2 8
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hpat1 429789 429795 AGA_2 6
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hpat1 429853 429857 CA_2 4
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hpat1 430179 430185 CAA_2 6
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hpat1 430234 430238 TA_2 4
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hpat1 430384 430393 CAA_3 9
hpat1 430395 430405 GCCAG_2 10
hpat1 430407 430411 CA_2 4
hpat1 430415 430421 AGA_2 6
hpat1 430427 430435 CAGC_2 8
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hpat1 430549 430553 TG_2 4
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hpat1 430626 430638 GTTT_3 12
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hpat1 430851 430855 CT_2 4
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hpat1 431123 431129 AGG_2 6
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hpat1 431240 431244 GA_2 4
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hpat1 431275 431279 AC_2 4
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hpat1 431288 431292 AG_2 4
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hpat1 431336 431342 ACA_2 6
hpat1 431392 431396 CA_2 4
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hpat1 431416 431420 CA_2 4
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hpat1 431439 431445 CAG_2 6
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hpat1 431657 431661 TA_2 4
hpat1 431663 431667 GA_2 4
hpat1 431669 431673 CA_2 4
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hpat1 431801 431805 AT_2 4
hpat1 431810 431814 GT_2 4
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hpat1 431907 431911 CA_2 4
hpat1 431925 431929 TA_2 4
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hpat1 431957 431963 AGA_2 6
hpat1 431964 431970 CAT_2 6
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hpat1 432028 432032 CT_2 4
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hpat1 432051 432057 ATA_2 6
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hpat1 432098 432102 TG_2 4
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hpat1 432158 432162 CA_2 4
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hpat1 432209 432215 ATG_2 6
hpat1 432251 432257 AGC_2 6
hpat1 432257 432261 AG_2 4
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hpat1 432313 432317 CT_2 4
hpat1 432320 432326 CAC_2 6
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hpat1 432465 432469 TA_2 4
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hpat1 432478 432482 TC_2 4
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hpat1 432538 432544 TAG_2 6
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hpat1 432629 432633 TC_2 4
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hpat1 432702 432706 TG_2 4
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hpat1 432729 432737 GT_4 8
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hpat1 432745 432755 ACTTT_2 10
hpat1 432756 432760 AG_2 4
hpat1 432823 432829 TCC_2 6
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hpat1 432853 432859 CAC_2 6
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hpat1 432887 432891 AG_2 4
hpat1 432934 432938 TC_2 4
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hpat1 433040 433044 GA_2 4
hpat1 433049 433053 TC_2 4
hpat1 433054 433058 CT_2 4
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hpat1 433078 433084 GTG_2 6
hpat1 433087 433091 TC_2 4
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hpat1 433217 433221 AG_2 4
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hpat1 433384 433388 AT_2 4
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hpat1 433431 433437 TAA_2 6
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hpat1 433528 433532 GA_2 4
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hpat1 433560 433564 TC_2 4
+hpat1 433568 433572 AA_2 4
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hpat1 433597 433601 GC_2 4
hpat1 433617 433623 CTA_2 6
+hpat1 433639 433643 AA_2 4
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hpat1 433662 433666 AG_2 4
hpat1 433679 433683 GA_2 4
+hpat1 433684 433688 TG_2 4
hpat1 433712 433716 AG_2 4
hpat1 433726 433730 TC_2 4
-hpat1 433735 433743 TAAA_2 8
+hpat1 433730 433734 AA_2 4
+hpat1 433734 433742 ATAA_2 8
+hpat1 433745 433749 AA_2 4
+hpat1 433755 433761 AA_3 6
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+hpat1 433783 433787 AA_2 4
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hpat1 433815 433819 AG_2 4
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hpat1 433857 433861 AT_2 4
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hpat1 433917 433921 TC_2 4
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hpat1 433937 433941 CA_2 4
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+hpat1 433953 433957 CC_2 4
hpat1 433964 433968 AT_2 4
hpat1 433968 433974 AGG_2 6
hpat1 433985 433997 CATTGA_2 12
-hpat1 434009 434013 AC_2 4
+hpat1 434008 434012 CA_2 4
+hpat1 434013 434017 TT_2 4
hpat1 434024 434028 TC_2 4
hpat1 434029 434037 TCAG_2 8
+hpat1 434041 434047 CCT_2 6
+hpat1 434076 434080 CA_2 4
hpat1 434098 434102 AG_2 4
+hpat1 434106 434110 GT_2 4
hpat1 434111 434115 TC_2 4
hpat1 434120 434128 CTTT_2 8
-hpat1 434177 434181 CA_2 4
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+hpat1 434174 434178 GC_2 4
hpat1 434193 434197 AT_2 4
+hpat1 434220 434224 TT_2 4
hpat1 434226 434230 AT_2 4
hpat1 434246 434250 TC_2 4
hpat1 434250 434254 CT_2 4
@@ -15293,268 +29150,465 @@
hpat1 434265 434273 CTGC_2 8
hpat1 434283 434287 TC_2 4
hpat1 434333 434339 TGG_2 6
-hpat1 434348 434352 AG_2 4
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hpat1 434357 434361 TA_2 4
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hpat1 434397 434401 TC_2 4
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hpat1 434431 434435 CA_2 4
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hpat1 434453 434465 GTT_4 12
-hpat1 434470 434474 GA_2 4
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hpat1 434476 434480 GT_2 4
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hpat1 434542 434546 CA_2 4
hpat1 434559 434563 GA_2 4
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hpat1 434591 434597 TC_3 6
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hpat1 434625 434631 GTG_2 6
hpat1 434654 434660 AGG_2 6
hpat1 434667 434673 AGA_2 6
hpat1 434710 434714 GA_2 4
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hpat1 434743 434747 AG_2 4
hpat1 434748 434752 GA_2 4
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hpat1 434788 434794 TC_3 6
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hpat1 434835 434841 TCC_2 6
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hpat1 434906 434910 AC_2 4
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hpat1 434933 434937 GA_2 4
hpat1 434942 434946 TC_2 4
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hpat1 434980 434984 TC_2 4
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hpat1 435082 435086 TA_2 4
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hpat1 435102 435106 AG_2 4
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hpat1 435148 435154 CGT_2 6
hpat1 435156 435162 TCC_2 6
hpat1 435170 435174 TC_2 4
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hpat1 435216 435220 TA_2 4
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hpat1 435243 435247 GA_2 4
hpat1 435251 435255 CT_2 4
hpat1 435257 435261 CT_2 4
hpat1 435289 435293 TC_2 4
+hpat1 435306 435310 CT_2 4
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hpat1 435337 435341 TC_2 4
hpat1 435464 435468 GA_2 4
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hpat1 435496 435500 TC_2 4
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hpat1 435527 435533 GTG_2 6
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hpat1 435591 435597 AGG_2 6
hpat1 435653 435657 GA_2 4
hpat1 435662 435666 TC_2 4
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hpat1 435693 435697 TG_2 4
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hpat1 435704 435712 CAGA_2 8
hpat1 435730 435734 CT_2 4
hpat1 435776 435780 CT_2 4
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hpat1 435794 435798 AC_2 4
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hpat1 435824 435828 AC_2 4
hpat1 435834 435842 TACT_2 8
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hpat1 435863 435867 CT_2 4
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hpat1 435900 435904 AT_2 4
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hpat1 435944 435948 TG_2 4
hpat1 435955 435963 CAAG_2 8
hpat1 435973 435977 TA_2 4
hpat1 436000 436004 AT_2 4
hpat1 436014 436018 GT_2 4
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hpat1 436061 436065 CA_2 4
hpat1 436069 436073 AT_2 4
hpat1 436076 436080 TC_2 4
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hpat1 436100 436106 TGT_2 6
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hpat1 436140 436146 TAC_2 6
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hpat1 436172 436176 TC_2 4
hpat1 436181 436185 AC_2 4
hpat1 436186 436192 CTA_2 6
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hpat1 436214 436218 CA_2 4
hpat1 436219 436223 AG_2 4
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hpat1 436239 436243 GA_2 4
hpat1 436248 436252 TC_2 4
hpat1 436270 436274 GT_2 4
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hpat1 436284 436288 TC_2 4
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hpat1 436367 436376 CAC_3 9
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hpat1 436432 436436 TC_2 4
hpat1 436484 436488 GA_2 4
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hpat1 436540 436544 GT_2 4
hpat1 436565 436569 GT_2 4
hpat1 436577 436581 AC_2 4
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hpat1 436590 436594 AC_2 4
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hpat1 436608 436612 TG_2 4
hpat1 436612 436616 AC_2 4
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hpat1 436681 436685 TG_2 4
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hpat1 436746 436752 GTG_2 6
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hpat1 436889 436899 TATCA_2 10
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hpat1 436907 436911 TG_2 4
hpat1 436918 436922 AG_2 4
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hpat1 437074 437078 GA_2 4
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hpat1 437105 437109 AC_2 4
hpat1 437112 437118 ACA_2 6
hpat1 437126 437130 CA_2 4
hpat1 437141 437145 TA_2 4
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hpat1 437158 437166 ATGC_2 8
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hpat1 437223 437227 GA_2 4
hpat1 437228 437232 GT_2 4
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hpat1 437257 437263 CT_3 6
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hpat1 437302 437306 GT_2 4
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hpat1 437413 437417 GA_2 4
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hpat1 437480 437486 TGG_2 6
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hpat1 437511 437517 AGG_2 6
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hpat1 437567 437571 GA_2 4
hpat1 437584 437588 CT_2 4
hpat1 437600 437604 AG_2 4
hpat1 437609 437613 CT_2 4
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hpat1 437659 437667 ACCT_2 8
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hpat1 437841 437845 GT_2 4
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hpat1 437879 437889 AT_5 10
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hpat1 437943 437949 CAC_2 6
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hpat1 438056 438062 GAT_2 6
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hpat1 438104 438108 CA_2 4
hpat1 438114 438118 CA_2 4
hpat1 438146 438154 AGGC_2 8
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hpat1 438175 438179 GA_2 4
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hpat1 438231 438241 GCCTG_2 10
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hpat1 438309 438313 AG_2 4
hpat1 438333 438337 CA_2 4
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hpat1 438366 438370 GA_2 4
hpat1 438375 438379 TC_2 4
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hpat1 438401 438405 GT_2 4
hpat1 438434 438438 CA_2 4
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hpat1 438497 438501 GA_2 4
hpat1 438511 438517 CAA_2 6
hpat1 438520 438524 GA_2 4
hpat1 438529 438533 TC_2 4
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hpat1 438562 438568 TGG_2 6
hpat1 438580 438586 AGG_2 6
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hpat1 438593 438597 GA_2 4
hpat1 438617 438621 TA_2 4
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hpat1 438643 438649 CAC_2 6
hpat1 438669 438673 AG_2 4
hpat1 438681 438687 TAT_2 6
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hpat1 438740 438746 GTA_2 6
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hpat1 438787 438791 AT_2 4
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hpat1 438819 438827 TAAC_2 8
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hpat1 438919 438923 TC_2 4
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hpat1 438961 438965 TG_2 4
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hpat1 438997 439003 ACC_2 6
hpat1 439004 439008 GA_2 4
hpat1 439018 439022 GA_2 4
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hpat1 439050 439054 TC_2 4
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hpat1 439080 439086 GTG_2 6
hpat1 439087 439091 CA_2 4
hpat1 439112 439118 AGG_2 6
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hpat1 439165 439169 GA_2 4
hpat1 439177 439181 CG_2 4
hpat1 439201 439207 CAA_2 6
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hpat1 439323 439329 ATC_2 6
hpat1 439344 439348 GA_2 4
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hpat1 439376 439380 TC_2 4
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hpat1 439479 439483 AG_2 4
hpat1 439496 439500 GA_2 4
hpat1 439506 439510 TA_2 4
hpat1 439520 439524 CT_2 4
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hpat1 439551 439555 TC_2 4
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hpat1 439583 439591 ACGG_2 8
hpat1 439637 439641 GA_2 4
hpat1 439646 439650 TC_2 4
hpat1 439674 439678 AG_2 4
hpat1 439678 439682 GC_2 4
hpat1 439684 439688 TC_2 4
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hpat1 439738 439742 TC_2 4
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hpat1 439841 439845 TC_2 4
hpat1 439871 439875 TC_2 4
hpat1 439891 439895 GA_2 4
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hpat1 439949 439957 TGGA_2 8
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hpat1 439976 439980 GA_2 4
hpat1 440008 440012 TC_2 4
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hpat1 440110 440114 GA_2 4
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hpat1 440177 440183 GTG_2 6
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hpat1 440209 440213 GA_2 4
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hpat1 440265 440269 GA_2 4
hpat1 440270 440274 CA_2 4
hpat1 440282 440286 CT_2 4
hpat1 440306 440310 TC_2 4
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hpat1 440329 440337 AGAA_2 8
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hpat1 440379 440383 GT_2 4
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hpat1 440412 440416 TG_2 4
hpat1 440416 440420 TA_2 4
hpat1 440420 440426 CA_3 6
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hpat1 440466 440472 AGA_2 6
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hpat1 440532 440538 GTA_2 6
hpat1 440538 440542 TA_2 4
hpat1 440558 440562 AG_2 4
hpat1 440579 440583 AT_2 4
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hpat1 440611 440619 TAAC_2 8
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hpat1 440645 440649 AC_2 4
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hpat1 440679 440683 GA_2 4
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hpat1 440724 440748 ATT_8 24
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hpat1 440763 440767 GA_2 4
hpat1 440768 440772 AG_2 4
hpat1 440782 440786 TC_2 4
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hpat1 440832 440836 TC_2 4
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hpat1 440893 440899 TGC_2 6
hpat1 440899 440905 CAC_2 6
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hpat1 440961 440965 TC_2 4
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hpat1 440986 440994 CTGC_2 8
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hpat1 441046 441052 ATT_2 6
hpat1 441073 441079 TAA_2 6
hpat1 441081 441085 CA_2 4
hpat1 441099 441103 GA_2 4
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hpat1 441128 441132 AG_2 4
hpat1 441153 441157 TG_2 4
hpat1 441179 441185 ATA_2 6
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hpat1 441213 441219 TCC_2 6
hpat1 441227 441233 CTG_2 6
hpat1 441246 441252 TAG_2 6
hpat1 441270 441278 TCTG_2 8
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hpat1 441299 441303 AG_2 4
hpat1 441309 441313 CA_2 4
hpat1 441319 441323 CA_2 4
-hpat1 441387 441395 ACCT_2 8
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hpat1 441426 441430 CA_2 4
hpat1 441432 441436 TA_2 4
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hpat1 441489 441493 GA_2 4
hpat1 441521 441525 TC_2 4
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+hpat1 441529 441533 AA_2 4
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hpat1 441584 441590 AGG_2 6
+hpat1 441599 441603 GA_2 4
hpat1 441633 441637 GT_2 4
hpat1 441640 441644 GA_2 4
hpat1 441673 441677 AG_2 4
@@ -15562,108 +29616,209 @@
hpat1 441687 441691 TC_2 4
hpat1 441691 441701 ATAAA_2 10
hpat1 441701 441709 TAAA_2 8
-hpat1 441712 441722 TAAAA_2 10
+hpat1 441709 441724 AAATA_3 15
hpat1 441732 441738 GTG_2 6
hpat1 441804 441808 GA_2 4
+hpat1 441831 441835 CC_2 4
hpat1 441836 441840 TC_2 4
+hpat1 441844 441848 AA_2 4
+hpat1 441852 441856 AA_2 4
hpat1 441866 441872 GTG_2 6
+hpat1 441913 441917 GA_2 4
+hpat1 441931 441935 AG_2 4
hpat1 441954 441958 GA_2 4
hpat1 441987 441991 GA_2 4
+hpat1 441993 441997 AA_2 4
hpat1 442002 442006 TC_2 4
+hpat1 442006 442012 AA_3 6
+hpat1 442018 442022 AA_2 4
hpat1 442022 442034 TAAAAA_2 12
hpat1 442034 442038 TA_2 4
hpat1 442038 442048 ATAAA_2 10
-hpat1 442150 442154 AG_2 4
+hpat1 442066 442070 TT_2 4
+hpat1 442092 442096 TA_2 4
+hpat1 442137 442141 CC_2 4
+hpat1 442149 442153 GA_2 4
hpat1 442165 442169 CA_2 4
+hpat1 442176 442180 AA_2 4
hpat1 442185 442189 TC_2 4
+hpat1 442192 442198 AA_3 6
hpat1 442232 442238 GCT_2 6
hpat1 442239 442245 AGG_2 6
hpat1 442246 442250 AG_2 4
+hpat1 442272 442276 TG_2 4
hpat1 442300 442304 AG_2 4
hpat1 442309 442313 CT_2 4
hpat1 442314 442318 TC_2 4
+hpat1 442318 442322 AA_2 4
+hpat1 442324 442332 AA_4 8
hpat1 442333 442337 TC_2 4
+hpat1 442341 442347 TTC_2 6
+hpat1 442357 442361 AC_2 4
hpat1 442377 442381 GA_2 4
hpat1 442381 442385 TG_2 4
hpat1 442390 442394 CT_2 4
-hpat1 442403 442407 TG_2 4
+hpat1 442402 442408 GT_3 6
hpat1 442460 442468 TCAT_2 8
+hpat1 442486 442490 GT_2 4
+hpat1 442513 442517 GG_2 4
+hpat1 442519 442523 AA_2 4
hpat1 442533 442541 CTCC_2 8
hpat1 442557 442561 CA_2 4
hpat1 442567 442571 AC_2 4
+hpat1 442576 442582 ATT_2 6
hpat1 442582 442588 AT_3 6
+hpat1 442609 442613 AA_2 4
hpat1 442616 442620 AG_2 4
-hpat1 442638 442647 CTT_3 9
+hpat1 442631 442637 TT_3 6
+hpat1 442637 442646 TCT_3 9
+hpat1 442646 442654 TT_4 8
hpat1 442654 442658 GA_2 4
hpat1 442668 442672 CT_2 4
+hpat1 442672 442678 TTG_2 6
hpat1 442689 442693 GC_2 4
hpat1 442694 442698 GT_2 4
hpat1 442703 442707 TC_2 4
+hpat1 442718 442730 ACCTCC_2 12
+hpat1 442744 442748 TC_2 4
hpat1 442786 442795 CAC_3 9
+hpat1 442805 442811 TT_3 6
+hpat1 442814 442818 TT_2 4
+hpat1 442823 442827 GA_2 4
+hpat1 442828 442832 GG_2 4
+hpat1 442832 442836 TT_2 4
hpat1 442869 442873 TC_2 4
hpat1 442880 442888 CTGC_2 8
-hpat1 442929 442933 AC_2 4
+hpat1 442924 442930 CCA_2 6
hpat1 442946 442952 ACT_2 6
-hpat1 442984 442988 TA_2 4
+hpat1 442983 442989 AT_3 6
+hpat1 442997 443003 CTT_2 6
+hpat1 443007 443023 TT_8 16
hpat1 443024 443028 GA_2 4
hpat1 443029 443033 AG_2 4
hpat1 443038 443042 CT_2 4
hpat1 443072 443076 TC_2 4
+hpat1 443087 443099 ACCTCC_2 12
+hpat1 443113 443117 TC_2 4
hpat1 443155 443161 CAC_2 6
-hpat1 443189 443193 AG_2 4
+hpat1 443174 443178 TT_2 4
+hpat1 443181 443185 TT_2 4
+hpat1 443185 443191 TAG_2 6
+hpat1 443199 443203 TT_2 4
hpat1 443222 443226 TC_2 4
-hpat1 443322 443334 ATTT_3 12
+hpat1 443231 443235 CC_2 4
+hpat1 443306 443312 CTT_2 6
+hpat1 443317 443321 TT_2 4
+hpat1 443321 443333 TATT_3 12
hpat1 443342 443346 TC_2 4
hpat1 443347 443351 CT_2 4
hpat1 443375 443379 CA_2 4
+hpat1 443403 443407 CT_2 4
+hpat1 443443 443449 CCA_2 6
+hpat1 443456 443460 TT_2 4
+hpat1 443460 443466 AA_3 6
+hpat1 443467 443473 TT_3 6
hpat1 443475 443479 AG_2 4
+hpat1 443481 443485 GG_2 4
hpat1 443485 443489 TC_2 4
+hpat1 443534 443538 CT_2 4
hpat1 443571 443575 TG_2 4
-hpat1 443582 443586 AC_2 4
+hpat1 443577 443583 CCA_2 6
hpat1 443590 443594 CT_2 4
-hpat1 443630 443636 GT_3 6
+hpat1 443609 443613 AA_2 4
+hpat1 443613 443617 TT_2 4
+hpat1 443619 443623 CA_2 4
+hpat1 443627 443631 AG_2 4
+hpat1 443631 443635 TG_2 4
+hpat1 443639 443643 GG_2 4
hpat1 443657 443663 AGA_2 6
hpat1 443667 443671 TG_2 4
hpat1 443683 443687 CA_2 4
hpat1 443688 443696 GAAA_2 8
-hpat1 443749 443753 AG_2 4
+hpat1 443715 443719 AG_2 4
+hpat1 443748 443754 GA_3 6
+hpat1 443777 443781 AA_2 4
+hpat1 443783 443793 GGCTG_2 10
hpat1 443832 443838 AGG_2 6
hpat1 443843 443851 AGGG_2 8
+hpat1 443852 443856 TT_2 4
+hpat1 443899 443903 TT_2 4
+hpat1 443905 443909 AG_2 4
+hpat1 443914 443918 AA_2 4
hpat1 443931 443935 AG_2 4
-hpat1 443945 443949 AT_2 4
+hpat1 443940 443944 TT_2 4
+hpat1 443944 443950 TA_3 6
hpat1 443971 443975 GA_2 4
-hpat1 443995 443999 GA_2 4
+hpat1 443977 443987 AATTT_2 10
+hpat1 443988 443994 CAA_2 6
+hpat1 443994 443998 AG_2 4
+hpat1 443998 444004 AA_3 6
hpat1 444010 444014 AT_2 4
-hpat1 444053 444057 AC_2 4
+hpat1 444018 444026 TT_4 8
+hpat1 444039 444043 CC_2 4
+hpat1 444052 444058 CA_3 6
hpat1 444059 444063 CA_2 4
hpat1 444112 444116 AT_2 4
+hpat1 444143 444147 AG_2 4
+hpat1 444155 444159 TT_2 4
hpat1 444165 444173 GTTT_2 8
hpat1 444175 444183 ACAT_2 8
+hpat1 444186 444190 CC_2 4
hpat1 444191 444197 TC_3 6
-hpat1 444365 444369 CT_2 4
+hpat1 444225 444229 GA_2 4
+hpat1 444247 444251 GG_2 4
+hpat1 444251 444257 AA_3 6
+hpat1 444289 444293 TT_2 4
+hpat1 444364 444368 TC_2 4
hpat1 444374 444378 CT_2 4
+hpat1 444385 444401 TT_8 16
hpat1 444401 444405 GA_2 4
hpat1 444415 444419 CT_2 4
+hpat1 444432 444436 GA_2 4
hpat1 444488 444494 TCC_2 6
+hpat1 444521 444525 CA_2 4
+hpat1 444549 444553 TT_2 4
hpat1 444557 444565 TA_4 8
+hpat1 444565 444569 TT_2 4
hpat1 444571 444575 AG_2 4
+hpat1 444575 444581 AA_3 6
hpat1 444582 444586 GT_2 4
hpat1 444598 444602 TC_2 4
hpat1 444613 444617 CT_2 4
+hpat1 444623 444631 CCAC_2 8
+hpat1 444668 444674 CCA_2 6
+hpat1 444694 444698 TT_2 4
+hpat1 444711 444715 AA_2 4
+hpat1 444716 444724 TTAC_2 8
+hpat1 444730 444734 AA_2 4
+hpat1 444734 444738 TT_2 4
hpat1 444743 444747 CT_2 4
hpat1 444756 444762 CAA_2 6
-hpat1 444774 444778 TA_2 4
+hpat1 444773 444777 AT_2 4
+hpat1 444786 444796 TTTAG_2 10
+hpat1 444805 444809 CT_2 4
+hpat1 444811 444817 AA_3 6
hpat1 444836 444842 ATT_2 6
hpat1 444877 444883 CT_3 6
hpat1 444898 444902 CT_2 4
+hpat1 444916 444920 AC_2 4
+hpat1 444925 444929 GT_2 4
hpat1 444934 444938 AG_2 4
-hpat1 444966 444972 CTG_2 6
-hpat1 444989 444995 CAC_2 6
+hpat1 444965 444971 GCT_2 6
+hpat1 444972 444978 TT_3 6
+hpat1 444983 444987 CC_2 4
+hpat1 444988 444992 AC_2 4
+hpat1 444995 445001 CCT_2 6
+hpat1 445004 445008 CC_2 4
+hpat1 445040 445044 GA_2 4
hpat1 445056 445060 GT_2 4
hpat1 445064 445068 CT_2 4
hpat1 445094 445098 TA_2 4
hpat1 445100 445104 CT_2 4
hpat1 445107 445111 TG_2 4
+hpat1 445115 445119 AA_2 4
+hpat1 445124 445128 AG_2 4
+hpat1 445135 445139 AA_2 4
hpat1 445168 445172 AG_2 4
hpat1 445173 445177 GA_2 4
hpat1 445187 445193 GAC_2 6
@@ -15671,299 +29826,564 @@
hpat1 445207 445213 AGC_2 6
hpat1 445214 445218 TC_2 4
hpat1 445234 445238 CA_2 4
-hpat1 445260 445264 GA_2 4
+hpat1 445259 445263 AG_2 4
hpat1 445266 445272 CAT_2 6
hpat1 445272 445276 AG_2 4
+hpat1 445296 445300 AA_2 4
+hpat1 445304 445308 AA_2 4
hpat1 445316 445322 TAT_2 6
hpat1 445334 445338 GA_2 4
+hpat1 445345 445349 TA_2 4
hpat1 445354 445358 AG_2 4
hpat1 445362 445368 AC_3 6
hpat1 445380 445384 GA_2 4
+hpat1 445405 445409 AA_2 4
+hpat1 445412 445416 CA_2 4
hpat1 445424 445428 AG_2 4
+hpat1 445433 445441 ATGT_2 8
hpat1 445449 445453 TC_2 4
+hpat1 445463 445469 TTC_2 6
+hpat1 445485 445489 CC_2 4
hpat1 445507 445513 TAT_2 6
-hpat1 445543 445549 TAG_2 6
+hpat1 445541 445545 TA_2 4
+hpat1 445547 445551 AG_2 4
hpat1 445569 445575 ATG_2 6
hpat1 445595 445603 GCTG_2 8
+hpat1 445604 445608 AA_2 4
hpat1 445608 445612 TA_2 4
hpat1 445619 445623 TA_2 4
-hpat1 445656 445662 CAA_2 6
+hpat1 445642 445646 AA_2 4
+hpat1 445649 445657 ATTC_2 8
hpat1 445688 445692 CT_2 4
-hpat1 445712 445732 ATTT_5 20
+hpat1 445704 445716 TTATTT_2 12
+hpat1 445716 445732 ATTT_4 16
+hpat1 445736 445740 AG_2 4
+hpat1 445761 445765 GG_2 4
hpat1 445765 445771 CAC_2 6
hpat1 445780 445784 TA_2 4
hpat1 445785 445791 CAA_2 6
+hpat1 445802 445806 TT_2 4
hpat1 445812 445820 AGGG_2 8
+hpat1 445839 445843 AA_2 4
+hpat1 445849 445853 TT_2 4
hpat1 445862 445866 AC_2 4
hpat1 445877 445881 TG_2 4
hpat1 445906 445910 AC_2 4
+hpat1 445931 445935 TC_2 4
hpat1 445939 445943 CT_2 4
+hpat1 445971 445975 CC_2 4
hpat1 445978 445982 AG_2 4
+hpat1 445996 446000 AA_2 4
hpat1 446023 446027 AC_2 4
+hpat1 446041 446047 AAC_2 6
+hpat1 446068 446074 CCT_2 6
+hpat1 446076 446080 AA_2 4
+hpat1 446081 446087 TT_3 6
hpat1 446088 446094 AT_3 6
+hpat1 446094 446098 TT_2 4
hpat1 446100 446104 AT_2 4
-hpat1 446139 446143 AT_2 4
+hpat1 446108 446112 AA_2 4
+hpat1 446138 446144 TA_3 6
hpat1 446150 446154 TC_2 4
hpat1 446154 446158 GT_2 4
+hpat1 446166 446170 AA_2 4
hpat1 446180 446186 ATT_2 6
+hpat1 446264 446268 AA_2 4
+hpat1 446276 446284 GG_4 8
+hpat1 446287 446291 TT_2 4
hpat1 446291 446295 GT_2 4
-hpat1 446297 446305 AGGG_2 8
-hpat1 446305 446313 AGAC_2 8
+hpat1 446295 446307 GGAG_3 12
+hpat1 446316 446320 CC_2 4
hpat1 446321 446325 AC_2 4
+hpat1 446325 446333 CCAC_2 8
+hpat1 446334 446340 ACT_2 6
hpat1 446341 446345 AT_2 4
+hpat1 446365 446369 AA_2 4
hpat1 446394 446400 AGG_2 6
+hpat1 446408 446414 GGA_2 6
+hpat1 446435 446439 GA_2 4
hpat1 446456 446460 TG_2 4
hpat1 446460 446464 AC_2 4
hpat1 446498 446504 TC_3 6
+hpat1 446504 446518 AA_7 14
hpat1 446542 446548 AGA_2 6
-hpat1 446551 446557 CAG_2 6
+hpat1 446549 446553 CA_2 4
hpat1 446557 446561 GA_2 4
-hpat1 446600 446604 CA_2 4
-hpat1 446644 446650 AGT_2 6
+hpat1 446563 446567 AA_2 4
+hpat1 446586 446590 AG_2 4
+hpat1 446599 446603 AC_2 4
+hpat1 446603 446607 AA_2 4
+hpat1 446608 446612 AA_2 4
+hpat1 446621 446625 CT_2 4
+hpat1 446643 446649 TAG_2 6
+hpat1 446656 446660 AA_2 4
+hpat1 446698 446702 AA_2 4
+hpat1 446712 446720 AAGA_2 8
+hpat1 446737 446743 AA_3 6
hpat1 446750 446758 AGTA_2 8
hpat1 446770 446774 TA_2 4
+hpat1 446782 446786 AA_2 4
+hpat1 446813 446819 CAA_2 6
hpat1 446821 446825 CT_2 4
hpat1 446826 446830 AT_2 4
-hpat1 446851 446863 CAAAAA_2 12
+hpat1 446834 446840 AA_3 6
+hpat1 446841 446845 AA_2 4
+hpat1 446849 446861 AACAAA_2 12
hpat1 446893 446897 AG_2 4
+hpat1 446901 446905 AA_2 4
hpat1 446916 446920 AG_2 4
+hpat1 446920 446924 GG_2 4
hpat1 446942 446946 AC_2 4
hpat1 446965 446969 CA_2 4
hpat1 446976 446982 TGC_2 6
+hpat1 447009 447017 GACA_2 8
hpat1 447018 447024 CA_3 6
+hpat1 447025 447029 AC_2 4
hpat1 447062 447066 AG_2 4
-hpat1 447131 447135 TA_2 4
+hpat1 447096 447100 AA_2 4
+hpat1 447104 447108 AA_2 4
+hpat1 447112 447116 AA_2 4
+hpat1 447123 447133 AAATA_2 10
+hpat1 447133 447143 TAAAA_2 10
hpat1 447143 447147 TA_2 4
+hpat1 447165 447169 AA_2 4
hpat1 447171 447175 TG_2 4
+hpat1 447183 447189 TAA_2 6
hpat1 447190 447194 GT_2 4
hpat1 447198 447202 CT_2 4
+hpat1 447212 447220 CCAT_2 8
hpat1 447221 447225 AG_2 4
+hpat1 447264 447270 AA_3 6
hpat1 447271 447277 ATT_2 6
+hpat1 447291 447295 GT_2 4
+hpat1 447305 447309 TT_2 4
hpat1 447319 447327 TATT_2 8
+hpat1 447332 447336 AA_2 4
hpat1 447342 447346 GA_2 4
hpat1 447347 447353 CAT_2 6
hpat1 447356 447362 CAA_2 6
hpat1 447373 447377 CA_2 4
+hpat1 447392 447396 AA_2 4
hpat1 447399 447403 TA_2 4
+hpat1 447403 447407 AA_2 4
hpat1 447412 447416 GC_2 4
-hpat1 447437 447449 ATT_4 12
+hpat1 447416 447420 TT_2 4
+hpat1 447420 447424 TA_2 4
+hpat1 447426 447432 ATT_2 6
+hpat1 447435 447447 TTA_4 12
hpat1 447449 447453 GA_2 4
hpat1 447458 447462 TC_2 4
+hpat1 447490 447494 GC_2 4
hpat1 447500 447504 AG_2 4
+hpat1 447508 447512 CT_2 4
hpat1 447531 447537 TCC_2 6
hpat1 447550 447554 AG_2 4
hpat1 447564 447568 CA_2 4
-hpat1 447581 447585 AC_2 4
+hpat1 447580 447584 CA_2 4
+hpat1 447594 447598 TT_2 4
+hpat1 447598 447602 AA_2 4
+hpat1 447604 447608 TT_2 4
hpat1 447611 447615 AG_2 4
hpat1 447627 447631 TG_2 4
hpat1 447644 447648 TC_2 4
hpat1 447668 447674 TCC_2 6
hpat1 447691 447695 GC_2 4
-hpat1 447707 447711 CG_2 4
+hpat1 447706 447710 GC_2 4
+hpat1 447730 447734 TT_2 4
hpat1 447734 447738 AC_2 4
+hpat1 447743 447747 AA_2 4
+hpat1 447752 447756 AA_2 4
hpat1 447764 447770 AGA_2 6
hpat1 447770 447778 CAGA_2 8
hpat1 447800 447806 CGT_2 6
+hpat1 447813 447817 GG_2 4
hpat1 447819 447823 CG_2 4
+hpat1 447851 447855 TT_2 4
hpat1 447866 447872 GCG_2 6
hpat1 447879 447883 CA_2 4
+hpat1 447887 447891 TG_2 4
+hpat1 447893 447897 TT_2 4
hpat1 447913 447917 TG_2 4
+hpat1 447927 447933 GAA_2 6
hpat1 447934 447940 TG_3 6
hpat1 447950 447956 CGG_2 6
hpat1 447958 447962 CG_2 4
hpat1 447966 447970 GC_2 4
hpat1 447971 447979 TCAA_2 8
-hpat1 448005 448009 AG_2 4
-hpat1 448085 448089 GC_2 4
+hpat1 448004 448008 GA_2 4
+hpat1 448015 448019 CC_2 4
+hpat1 448021 448025 GG_2 4
+hpat1 448026 448032 GGC_2 6
+hpat1 448067 448071 GG_2 4
+hpat1 448073 448083 GGCCT_2 10
+hpat1 448084 448088 CG_2 4
hpat1 448091 448097 GAG_2 6
-hpat1 448106 448110 TC_2 4
+hpat1 448105 448109 CT_2 4
+hpat1 448116 448122 GAA_2 6
+hpat1 448126 448130 GG_2 4
hpat1 448130 448134 CG_2 4
hpat1 448136 448145 GCC_3 9
hpat1 448147 448151 CT_2 4
+hpat1 448158 448162 GG_2 4
hpat1 448163 448167 CG_2 4
hpat1 448168 448172 CT_2 4
hpat1 448172 448178 GCC_2 6
-hpat1 448231 448235 TC_2 4
+hpat1 448202 448210 CCCG_2 8
+hpat1 448212 448218 CC_3 6
+hpat1 448230 448234 CT_2 4
hpat1 448236 448242 TCA_2 6
-hpat1 448270 448274 TC_2 4
-hpat1 448274 448280 GCC_2 6
+hpat1 448269 448273 CT_2 4
+hpat1 448273 448279 CGC_2 6
+hpat1 448285 448289 CC_2 4
hpat1 448289 448295 GCA_2 6
-hpat1 448313 448317 GC_2 4
-hpat1 448325 448331 CGC_2 6
+hpat1 448296 448300 CC_2 4
+hpat1 448304 448308 CC_2 4
+hpat1 448312 448316 CG_2 4
+hpat1 448316 448320 CC_2 4
+hpat1 448324 448328 GC_2 4
hpat1 448340 448352 CTGCCC_2 12
-hpat1 448413 448417 GC_2 4
+hpat1 448356 448362 GGC_2 6
+hpat1 448380 448384 GC_2 4
+hpat1 448408 448412 TC_2 4
+hpat1 448412 448416 CG_2 4
+hpat1 448416 448422 CCG_2 6
+hpat1 448439 448443 GG_2 4
hpat1 448453 448457 GC_2 4
+hpat1 448473 448477 CC_2 4
+hpat1 448477 448481 GG_2 4
+hpat1 448481 448485 CC_2 4
+hpat1 448488 448492 CC_2 4
+hpat1 448500 448504 CC_2 4
hpat1 448507 448513 TGG_2 6
-hpat1 448523 448529 AGA_2 6
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hpat1 448529 448533 CG_2 4
+hpat1 448541 448545 CG_2 4
hpat1 448560 448572 TCGGCA_2 12
+hpat1 448576 448580 CC_2 4
hpat1 448591 448597 GCG_2 6
-hpat1 448603 448607 CG_2 4
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+hpat1 448610 448614 GC_2 4
+hpat1 448621 448631 GCCCC_2 10
hpat1 448631 448635 GC_2 4
hpat1 448649 448653 GC_2 4
+hpat1 448658 448666 CCGG_2 8
hpat1 448666 448672 CGG_2 6
-hpat1 448689 448693 GC_2 4
+hpat1 448686 448690 AG_2 4
+hpat1 448690 448694 CG_2 4
hpat1 448698 448702 GC_2 4
hpat1 448705 448711 GAG_2 6
hpat1 448723 448727 GC_2 4
hpat1 448733 448737 CT_2 4
+hpat1 448740 448744 GT_2 4
hpat1 448744 448748 AG_2 4
hpat1 448748 448752 TG_2 4
hpat1 448752 448756 GC_2 4
hpat1 448766 448770 GT_2 4
hpat1 448774 448778 GA_2 4
hpat1 448797 448803 CTT_2 6
-hpat1 448822 448828 GAT_2 6
+hpat1 448811 448815 AA_2 4
+hpat1 448821 448827 TGA_2 6
+hpat1 448827 448833 TAA_2 6
+hpat1 448835 448839 AT_2 4
hpat1 448845 448849 CA_2 4
hpat1 448857 448861 GA_2 4
hpat1 448861 448865 GT_2 4
hpat1 448882 448886 AT_2 4
+hpat1 448897 448901 CA_2 4
+hpat1 448912 448916 TT_2 4
hpat1 448928 448934 ATT_2 6
+hpat1 448934 448938 TT_2 4
+hpat1 448940 448946 CCT_2 6
hpat1 448946 448956 GTCTC_2 10
-hpat1 448959 448963 AC_2 4
+hpat1 448958 448962 CA_2 4
hpat1 448972 448978 TCA_2 6
+hpat1 448992 448996 GG_2 4
hpat1 449032 449042 TGCAC_2 10
hpat1 449053 449057 GC_2 4
-hpat1 449128 449132 GC_2 4
+hpat1 449086 449090 CC_2 4
+hpat1 449097 449101 TG_2 4
+hpat1 449124 449130 AGC_2 6
+hpat1 449131 449135 CT_2 4
+hpat1 449157 449161 TC_2 4
hpat1 449171 449175 AT_2 4
-hpat1 449211 449215 AT_2 4
+hpat1 449177 449185 CTTT_2 8
+hpat1 449210 449214 TA_2 4
hpat1 449222 449234 ATTGTG_2 12
+hpat1 449292 449298 TGA_2 6
hpat1 449298 449304 CT_3 6
-hpat1 449324 449330 ACA_2 6
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hpat1 449345 449349 GA_2 4
-hpat1 449396 449400 TC_2 4
-hpat1 449430 449434 GC_2 4
-hpat1 449475 449479 AT_2 4
+hpat1 449381 449389 CCGC_2 8
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hpat1 449571 449575 CA_2 4
-hpat1 449603 449607 GT_2 4
+hpat1 449602 449606 TG_2 4
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hpat1 449662 449666 TG_2 4
hpat1 449677 449681 GA_2 4
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hpat1 449720 449724 AT_2 4
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hpat1 449783 449787 GA_2 4
hpat1 449788 449792 AG_2 4
hpat1 449792 449796 TC_2 4
hpat1 449797 449801 CT_2 4
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hpat1 449896 449900 GA_2 4
hpat1 449907 449913 CA_3 6
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hpat1 449961 449965 TC_2 4
hpat1 449984 449988 TC_2 4
hpat1 450010 450014 CT_2 4
hpat1 450032 450036 CA_2 4
hpat1 450044 450048 CT_2 4
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hpat1 450084 450088 CA_2 4
hpat1 450091 450095 AC_2 4
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hpat1 450164 450168 TG_2 4
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hpat1 450268 450272 TC_2 4
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hpat1 450300 450306 TGG_2 6
hpat1 450306 450314 TGCC_2 8
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hpat1 450370 450374 AG_2 4
hpat1 450393 450397 GC_2 4
-hpat1 450415 450419 GA_2 4
+hpat1 450414 450418 AG_2 4
hpat1 450425 450429 GA_2 4
hpat1 450434 450438 TC_2 4
+hpat1 450438 450444 AA_3 6
hpat1 450444 450456 TAAA_3 12
hpat1 450466 450472 TCA_2 6
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hpat1 450501 450509 GAAG_2 8
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hpat1 450552 450556 GA_2 4
hpat1 450556 450564 TATT_2 8
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hpat1 450580 450584 GC_2 4
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hpat1 450660 450664 CT_2 4
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hpat1 450736 450740 TA_2 4
hpat1 450740 450744 AT_2 4
-hpat1 450783 450789 CTT_2 6
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hpat1 450791 450797 TGT_2 6
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hpat1 450828 450832 CT_2 4
-hpat1 450851 450859 ACCA_2 8
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hpat1 450892 450896 TA_2 4
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+hpat1 450918 450924 TT_3 6
hpat1 450936 450940 AT_2 4
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hpat1 450963 450969 CTT_2 6
-hpat1 451031 451037 GTT_2 6
-hpat1 451059 451063 TA_2 4
+hpat1 450981 450987 ATT_2 6
+hpat1 450988 450992 TA_2 4
+hpat1 451022 451034 TTTGTT_2 12
+hpat1 451058 451062 AT_2 4
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hpat1 451099 451103 TG_2 4
hpat1 451111 451115 AC_2 4
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+hpat1 451156 451162 AA_3 6
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hpat1 451192 451196 CT_2 4
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hpat1 451260 451264 CA_2 4
hpat1 451276 451280 CA_2 4
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hpat1 451287 451291 TA_2 4
hpat1 451302 451306 TC_2 4
hpat1 451307 451311 GT_2 4
hpat1 451331 451335 AG_2 4
hpat1 451341 451349 TCAT_2 8
+hpat1 451369 451373 TT_2 4
hpat1 451375 451381 TGC_2 6
hpat1 451387 451391 AG_2 4
hpat1 451406 451410 AG_2 4
hpat1 451410 451414 AT_2 4
+hpat1 451421 451425 AA_2 4
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hpat1 451432 451440 TATT_2 8
hpat1 451455 451467 TATT_3 12
hpat1 451470 451476 TG_3 6
hpat1 451476 451488 TATG_3 12
+hpat1 451490 451496 TT_3 6
hpat1 451497 451501 GA_2 4
hpat1 451511 451515 CT_2 4
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hpat1 451693 451697 TC_2 4
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hpat1 451811 451817 GTG_2 6
hpat1 451820 451824 CA_2 4
hpat1 451852 451860 AGGC_2 8
hpat1 451883 451887 GA_2 4
hpat1 451901 451907 GTG_2 6
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hpat1 451953 451957 CA_2 4
hpat1 451978 451984 AGG_2 6
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hpat1 452010 452016 AGG_2 6
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hpat1 452034 452038 GA_2 4
hpat1 452039 452043 CA_2 4
hpat1 452067 452071 AG_2 4
hpat1 452072 452076 GA_2 4
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hpat1 452128 452132 AG_2 4
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hpat1 452187 452193 TCC_2 6
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hpat1 452316 452320 CT_2 4
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hpat1 452358 452362 AT_2 4
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hpat1 452463 452467 AC_2 4
hpat1 452478 452482 TA_2 4
-hpat1 452512 452520 GT_4 8
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+hpat1 452511 452519 TG_4 8
hpat1 452521 452525 TG_2 4
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hpat1 452535 452547 ATCAGC_2 12
hpat1 452591 452595 TC_2 4
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hpat1 452625 452631 TCT_2 6
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hpat1 452677 452681 TA_2 4
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hpat1 452690 452694 AT_2 4
hpat1 452694 452702 GT_4 8
hpat1 452702 452728 AT_13 26
-hpat1 452746 452750 CT_2 4
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hpat1 452753 452759 CTT_2 6
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hpat1 452774 452778 CT_2 4
-hpat1 452835 452841 CT_3 6
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hpat1 452862 452866 TA_2 4
hpat1 452866 452870 AT_2 4
hpat1 452876 452880 GT_2 4
hpat1 452883 452887 AT_2 4
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hpat1 452897 452901 CT_2 4
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hpat1 452949 452953 GT_2 4
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-hpat1 452991 452999 CATT_2 8
-hpat1 452999 453003 CT_2 4
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hpat1 453010 453014 TG_2 4
hpat1 453043 453047 CT_2 4
hpat1 453050 453054 TC_2 4
hpat1 453058 453062 TC_2 4
hpat1 453067 453073 GT_3 6
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hpat1 453093 453097 GA_2 4
hpat1 453102 453106 TC_2 4
hpat1 453107 453111 CT_2 4
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hpat1 453136 453140 TC_2 4
hpat1 453153 453157 CT_2 4
hpat1 453169 453173 CA_2 4
-hpat1 453255 453259 AG_2 4
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+hpat1 453247 453251 TT_2 4
+hpat1 453251 453257 TAG_2 6
+hpat1 453261 453265 GG_2 4
+hpat1 453271 453275 CG_2 4
hpat1 453288 453292 TC_2 4
hpat1 453294 453298 TC_2 4
hpat1 453374 453380 GT_3 6
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hpat1 453421 453427 TC_3 6
hpat1 453431 453435 GA_2 4
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hpat1 453453 453457 AT_2 4
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+hpat1 453479 453483 TT_2 4
hpat1 453486 453490 AT_2 4
hpat1 453511 453515 CA_2 4
hpat1 453518 453522 CT_2 4
@@ -15971,82 +30391,170 @@
hpat1 453554 453558 TC_2 4
hpat1 453576 453580 TC_2 4
hpat1 453591 453595 GT_2 4
-hpat1 453615 453619 GT_2 4
+hpat1 453614 453618 TG_2 4
hpat1 453623 453629 TAG_2 6
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hpat1 453650 453654 GT_2 4
hpat1 453663 453667 CA_2 4
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hpat1 453732 453740 TGGG_2 8
-hpat1 453797 453801 CA_2 4
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hpat1 453808 453812 GA_2 4
hpat1 453821 453827 ACA_2 6
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hpat1 453840 453844 TC_2 4
+hpat1 453847 453855 AA_4 8
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+hpat1 453872 453876 TT_2 4
hpat1 453887 453893 TGT_2 6
hpat1 453932 453936 CT_2 4
hpat1 453963 453975 CAGATA_2 12
-hpat1 454021 454025 GA_2 4
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+hpat1 453984 453988 AG_2 4
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hpat1 454111 454117 TAA_2 6
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hpat1 454137 454143 AG_3 6
hpat1 454149 454157 TGCA_2 8
+hpat1 454167 454175 GGTT_2 8
+hpat1 454179 454183 GA_2 4
hpat1 454243 454247 CT_2 4
hpat1 454259 454263 GA_2 4
-hpat1 454335 454339 GT_2 4
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hpat1 454345 454349 TA_2 4
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hpat1 454372 454376 TC_2 4
hpat1 454381 454385 TC_2 4
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hpat1 454433 454437 TG_2 4
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hpat1 454577 454587 TCAGT_2 10
hpat1 454587 454591 GT_2 4
-hpat1 454654 454658 AG_2 4
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hpat1 454709 454715 AGA_2 6
hpat1 454725 454729 AG_2 4
hpat1 454746 454754 GCAG_2 8
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hpat1 454827 454831 AG_2 4
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hpat1 454857 454863 TCT_2 6
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hpat1 454912 454918 CAT_2 6
hpat1 454925 454929 TG_2 4
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hpat1 455035 455039 TG_2 4
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hpat1 455048 455052 AT_2 4
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hpat1 455120 455124 TG_2 4
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hpat1 455137 455141 GA_2 4
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hpat1 455162 455166 TA_2 4
hpat1 455183 455195 ATTTAA_2 12
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hpat1 455222 455228 TAG_2 6
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hpat1 455274 455278 AT_2 4
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hpat1 455290 455294 AC_2 4
hpat1 455297 455303 CTA_2 6
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hpat1 455334 455338 TG_2 4
hpat1 455356 455360 GT_2 4
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+hpat1 455423 455429 GCC_2 6
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hpat1 455465 455469 AT_2 4
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hpat1 455509 455513 GA_2 4
hpat1 455537 455541 AT_2 4
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hpat1 455642 455646 TG_2 4
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hpat1 455774 455780 CAT_2 6
hpat1 455833 455837 TG_2 4
-hpat1 455847 455853 TG_3 6
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hpat1 455865 455869 TG_2 4
hpat1 455896 455902 GAA_2 6
hpat1 455908 455914 CA_3 6
hpat1 455924 455928 GA_2 4
-hpat1 455963 455971 TAAA_2 8
+hpat1 455947 455951 TT_2 4
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+hpat1 455961 455969 AATA_2 8
hpat1 455972 455976 AG_2 4
hpat1 455981 455985 AG_2 4
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hpat1 456003 456007 AG_2 4
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+hpat1 456022 456026 GG_2 4
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hpat1 456049 456055 CT_3 6
hpat1 456075 456083 TGAG_2 8
hpat1 456095 456099 TC_2 4
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hpat1 456128 456132 AG_2 4
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hpat1 456145 456149 GT_2 4
hpat1 456153 456157 GT_2 4
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+hpat1 456165 456169 GG_2 4
+hpat1 456175 456181 ACT_2 6
hpat1 456189 456193 CA_2 4
hpat1 456206 456210 GA_2 4
hpat1 456230 456236 CAG_2 6
@@ -16055,6 +30563,8 @@
hpat1 456258 456262 TG_2 4
hpat1 456267 456271 AG_2 4
hpat1 456289 456293 AG_2 4
+hpat1 456296 456300 GG_2 4
+hpat1 456320 456324 TT_2 4
hpat1 456344 456350 CAT_2 6
hpat1 456383 456387 TA_2 4
hpat1 456396 456404 ACTA_2 8
@@ -16062,379 +30572,734 @@
hpat1 456422 456426 GT_2 4
hpat1 456431 456435 TC_2 4
hpat1 456439 456443 TG_2 4
+hpat1 456446 456452 AA_3 6
+hpat1 456475 456479 GG_2 4
hpat1 456482 456488 TC_3 6
+hpat1 456502 456506 GG_2 4
+hpat1 456512 456518 TAG_2 6
+hpat1 456519 456523 AA_2 4
+hpat1 456523 456531 ACAA_2 8
+hpat1 456545 456549 GG_2 4
hpat1 456555 456559 TG_2 4
hpat1 456559 456563 AT_2 4
+hpat1 456569 456573 CT_2 4
hpat1 456573 456577 GA_2 4
hpat1 456586 456590 CT_2 4
-hpat1 456634 456638 AG_2 4
+hpat1 456606 456610 TT_2 4
+hpat1 456610 456616 TGC_2 6
+hpat1 456633 456637 GA_2 4
+hpat1 456666 456670 AA_2 4
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hpat1 456688 456694 AGT_2 6
-hpat1 456756 456760 TG_2 4
+hpat1 456706 456710 GG_2 4
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+hpat1 456755 456761 GT_3 6
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hpat1 456807 456815 GTAT_2 8
hpat1 456820 456824 AT_2 4
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hpat1 456867 456871 TG_2 4
hpat1 456884 456888 AG_2 4
hpat1 456890 456894 AT_2 4
+hpat1 456900 456904 AA_2 4
hpat1 456911 456915 CT_2 4
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hpat1 456935 456941 ATC_2 6
+hpat1 456944 456948 AA_2 4
+hpat1 456950 456956 AAT_2 6
+hpat1 456974 456978 TT_2 4
+hpat1 456983 456987 GG_2 4
hpat1 457013 457017 AC_2 4
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hpat1 464278 464286 GTGG_2 8
hpat1 464298 464302 AG_2 4
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hpat1 464321 464325 TA_2 4
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hpat1 464459 464463 GA_2 4
hpat1 464463 464467 CT_2 4
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hpat1 464500 464506 GCT_2 6
hpat1 464506 464512 GCA_2 6
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hpat1 464560 464566 GAT_2 6
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hpat1 464732 464736 TC_2 4
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hpat1 464815 464819 TC_2 4
hpat1 464853 464859 ATG_2 6
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hpat1 464933 464937 TG_2 4
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hpat1 464951 464955 CT_2 4
hpat1 464967 464971 AG_2 4
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hpat1 464995 465003 CAAA_2 8
hpat1 465018 465022 AG_2 4
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hpat1 465081 465085 AG_2 4
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hpat1 465170 465174 AT_2 4
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hpat1 465191 465195 AC_2 4
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hpat1 465257 465261 TA_2 4
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hpat1 465291 465295 CA_2 4
hpat1 465307 465313 AGA_2 6
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hpat1 465333 465337 CT_2 4
hpat1 465340 465344 AT_2 4
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hpat1 465376 465380 CT_2 4
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hpat1 465532 465536 TG_2 4
hpat1 465542 465550 CTTT_2 8
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hpat1 465599 465603 TG_2 4
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hpat1 465615 465621 AG_3 6
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hpat1 465640 465644 CA_2 4
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hpat1 465657 465661 CT_2 4
hpat1 465664 465668 AG_2 4
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hpat1 465718 465722 CA_2 4
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hpat1 465737 465741 TA_2 4
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hpat1 465791 465795 AC_2 4
hpat1 465802 465806 AT_2 4
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hpat1 465839 465843 AC_2 4
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hpat1 465906 465912 ATG_2 6
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hpat1 466043 466047 AT_2 4
hpat1 466053 466057 TA_2 4
hpat1 466059 466065 AC_3 6
hpat1 466073 466079 CAG_2 6
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hpat1 466097 466103 GCA_2 6
hpat1 466110 466116 CTA_2 6
hpat1 466163 466167 TC_2 4
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hpat1 466206 466210 TG_2 4
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hpat1 466257 466261 GA_2 4
hpat1 466263 466267 CT_2 4
hpat1 466272 466278 CAA_2 6
-hpat1 466294 466316 GT_11 22
-hpat1 466319 466327 TGGG_2 8
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-hpat1 466342 466346 AG_2 4
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hpat1 466357 466367 TGGAG_2 10
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hpat1 466393 466399 TAT_2 6
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hpat1 466450 466454 CT_2 4
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hpat1 466573 466579 ACA_2 6
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hpat1 466620 466626 TGA_2 6
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hpat1 466676 466684 AGGA_2 8
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hpat1 466721 466725 GT_2 4
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hpat1 466759 466765 CT_3 6
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hpat1 466804 466810 TGG_2 6
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hpat1 466939 466943 TC_2 4
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hpat1 466950 466954 CT_2 4
hpat1 466967 466971 TA_2 4
hpat1 467006 467012 AT_3 6
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hpat1 467028 467032 CT_2 4
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hpat1 467117 467123 CA_3 6
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hpat1 467142 467146 AT_2 4
hpat1 467163 467173 CATTT_2 10
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hpat1 467214 467218 CA_2 4
hpat1 467219 467225 CTT_2 6
hpat1 467230 467234 CA_2 4
-hpat1 467257 467267 ACAAT_2 10
+hpat1 467256 467266 TACAA_2 10
+hpat1 467287 467291 GG_2 4
+hpat1 467313 467321 AA_4 8
hpat1 467323 467327 AG_2 4
-hpat1 467330 467340 GAGGG_2 10
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hpat1 467347 467355 CAAA_2 8
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hpat1 467382 467386 AG_2 4
+hpat1 467414 467424 CCATT_2 10
hpat1 467446 467450 AC_2 4
hpat1 467460 467464 GA_2 4
hpat1 467468 467472 GT_2 4
@@ -16442,145 +31307,290 @@
hpat1 467503 467512 ACA_3 9
hpat1 467517 467523 GTT_2 6
hpat1 467524 467528 CT_2 4
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hpat1 467581 467589 CT_4 8
hpat1 467606 467610 CT_2 4
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hpat1 467633 467641 TATT_2 8
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hpat1 467649 467653 CT_2 4
hpat1 467666 467670 AG_2 4
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hpat1 467736 467740 CT_2 4
hpat1 467757 467761 AC_2 4
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hpat1 467848 467852 GT_2 4
hpat1 467863 467867 CA_2 4
hpat1 467885 467889 CA_2 4
hpat1 467896 467900 TC_2 4
hpat1 467903 467907 CA_2 4
+hpat1 467915 467919 TT_2 4
hpat1 467927 467931 CA_2 4
hpat1 467950 467954 CA_2 4
-hpat1 468030 468034 AC_2 4
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hpat1 468056 468060 CT_2 4
hpat1 468070 468074 GA_2 4
hpat1 468075 468079 GC_2 4
hpat1 468079 468083 TA_2 4
-hpat1 468118 468122 AT_2 4
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hpat1 468222 468228 ATG_2 6
hpat1 468235 468239 GA_2 4
hpat1 468245 468249 TG_2 4
hpat1 468253 468257 TA_2 4
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hpat1 468362 468366 AG_2 4
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hpat1 468460 468472 AC_6 12
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hpat1 468516 468522 CTG_2 6
hpat1 468524 468528 AC_2 4
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hpat1 468563 468567 AG_2 4
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hpat1 468607 468611 CT_2 4
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hpat1 468640 468644 TA_2 4
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hpat1 468695 468699 TG_2 4
hpat1 468704 468708 GA_2 4
hpat1 468708 468716 CACC_2 8
hpat1 468729 468733 AC_2 4
hpat1 468755 468763 ATAA_2 8
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hpat1 468808 468812 CA_2 4
hpat1 468826 468832 TAT_2 6
hpat1 468832 468838 AT_3 6
hpat1 468838 468844 AC_3 6
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hpat1 468931 468935 CT_2 4
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hpat1 468967 468973 GAG_2 6
hpat1 468977 468983 TCT_2 6
hpat1 468995 468999 TG_2 4
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hpat1 469052 469056 GT_2 4
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hpat1 469063 469067 TC_2 4
hpat1 469074 469078 CT_2 4
hpat1 469100 469108 TGTT_2 8
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hpat1 469217 469221 CA_2 4
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hpat1 469309 469313 TA_2 4
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hpat1 469376 469384 TCTG_2 8
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hpat1 469422 469428 AC_3 6
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hpat1 469461 469465 GC_2 4
hpat1 469492 469500 AGCA_2 8
hpat1 469512 469516 TA_2 4
hpat1 469523 469529 TCC_2 6
hpat1 469529 469537 CTTC_2 8
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hpat1 469588 469592 TC_2 4
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hpat1 469605 469609 GA_2 4
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hpat1 469624 469628 GT_2 4
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hpat1 469646 469652 TGG_2 6
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hpat1 469665 469669 TC_2 4
hpat1 469678 469684 GCA_2 6
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hpat1 469719 469725 TGA_2 6
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hpat1 469855 469861 TAT_2 6
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hpat1 469911 469915 AC_2 4
hpat1 469927 469931 GT_2 4
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hpat1 470022 470028 CTG_2 6
hpat1 470029 470033 GC_2 4
-hpat1 470069 470075 CAG_2 6
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hpat1 470095 470099 AG_2 4
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hpat1 470125 470131 GAA_2 6
hpat1 470137 470145 GAAA_2 8
hpat1 470145 470149 AG_2 4
hpat1 470166 470170 AC_2 4
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hpat1 470201 470209 CACT_2 8
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hpat1 470264 470268 AT_2 4
hpat1 470285 470289 CA_2 4
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hpat1 470377 470381 AC_2 4
hpat1 470433 470437 AG_2 4
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hpat1 470469 470473 TG_2 4
hpat1 470473 470479 GCT_2 6
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hpat1 470582 470586 CA_2 4
hpat1 470605 470609 TG_2 4
hpat1 470609 470613 CT_2 4
hpat1 470614 470618 AC_2 4
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hpat1 470781 470785 TG_2 4
hpat1 470786 470792 AC_3 6
hpat1 470804 470808 CA_2 4
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hpat1 470837 470841 TA_2 4
hpat1 470856 470860 GT_2 4
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hpat1 470957 470961 TC_2 4
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hpat1 471066 471072 GCA_2 6
hpat1 471075 471079 GA_2 4
-hpat1 471108 471112 AG_2 4
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hpat1 471122 471126 TC_2 4
hpat1 471165 471221 TA_28 56
hpat1 471222 471226 GA_2 4
hpat1 471228 471234 ATT_2 6
+hpat1 471239 471245 TTC_2 6
hpat1 471249 471255 CTC_2 6
hpat1 471265 471269 CT_2 4
hpat1 471272 471276 TC_2 4
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hpat1 471288 471292 GA_2 4
hpat1 471293 471297 AG_2 4
hpat1 471297 471301 TC_2 4
hpat1 471302 471306 CT_2 4
hpat1 471333 471337 TC_2 4
-hpat1 471411 471420 CGC_3 9
+hpat1 471350 471354 CT_2 4
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hpat1 471450 471454 AG_2 4
hpat1 471483 471487 TC_2 4
hpat1 471506 471514 ACCC_2 8
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hpat1 471589 471593 CA_2 4
-hpat1 471598 471602 AT_2 4
+hpat1 471593 471599 TTA_2 6
+hpat1 471601 471613 TTGGAG_2 12
hpat1 471631 471635 CT_2 4
hpat1 471649 471655 CAC_2 6
hpat1 471669 471673 AT_2 4
+hpat1 471711 471715 TC_2 4
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+hpat1 471724 471730 TTA_2 6
+hpat1 471743 471751 AAGT_2 8
hpat1 471755 471759 AT_2 4
hpat1 471765 471769 CT_2 4
hpat1 471773 471777 AG_2 4
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hpat1 471809 471817 AGTT_2 8
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hpat1 471831 471837 GAG_2 6
+hpat1 471847 471853 ATT_2 6
hpat1 471858 471862 AT_2 4
hpat1 471862 471870 GTAA_2 8
hpat1 471886 471890 AT_2 4
@@ -16588,53 +31598,100 @@
hpat1 471916 471920 TA_2 4
hpat1 471932 471936 TG_2 4
hpat1 471964 471968 CT_2 4
+hpat1 471970 471974 AA_2 4
hpat1 471980 471984 TG_2 4
hpat1 471987 471991 CA_2 4
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+hpat1 472006 472010 AA_2 4
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hpat1 472043 472047 CT_2 4
hpat1 472054 472058 CT_2 4
hpat1 472060 472064 CA_2 4
hpat1 472083 472095 TACACA_2 12
hpat1 472101 472105 TA_2 4
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hpat1 472802 472806 AG_2 4
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hpat1 473403 473407 GT_2 4
hpat1 473422 473428 GCA_2 6
hpat1 473452 473456 CT_2 4
@@ -16645,35 +31702,55 @@
hpat1 473484 473488 CT_2 4
hpat1 473497 473501 AT_2 4
hpat1 473508 473512 CA_2 4
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hpat1 474295 474299 TC_2 4
hpat1 474303 474309 TGT_2 6
hpat1 474318 474322 TC_2 4
@@ -16681,172 +31758,363 @@
hpat1 474367 474371 AT_2 4
hpat1 474391 474395 CA_2 4
hpat1 474406 474414 GCAT_2 8
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hpat1 479752 479756 TG_2 4
-hpat1 479759 479769 GT_5 10
-hpat1 479785 479789 CA_2 4
+hpat1 479758 479768 TG_5 10
+hpat1 479781 479787 TCA_2 6
+hpat1 479788 479792 AT_2 4
hpat1 479800 479804 AT_2 4
hpat1 479806 479810 TC_2 4
hpat1 479812 479818 CAA_2 6
@@ -16854,72 +32122,139 @@
hpat1 479836 479842 CAC_2 6
hpat1 479842 479846 AC_2 4
hpat1 479852 479858 TG_3 6
+hpat1 479867 479871 CC_2 4
+hpat1 479877 479881 CC_2 4
hpat1 479885 479889 CT_2 4
hpat1 479892 479896 TC_2 4
+hpat1 479901 479905 TT_2 4
hpat1 479905 479909 GA_2 4
+hpat1 479916 479920 AA_2 4
hpat1 479934 479938 AT_2 4
+hpat1 479941 479947 TT_3 6
hpat1 479948 479952 GA_2 4
+hpat1 479957 479963 TT_3 6
hpat1 479973 479977 GA_2 4
hpat1 479977 479985 TCCA_2 8
hpat1 479986 479992 GTT_2 6
hpat1 479995 479999 TG_2 4
hpat1 480004 480010 CTT_2 6
+hpat1 480013 480017 TT_2 4
hpat1 480024 480028 GA_2 4
hpat1 480030 480036 TAC_2 6
hpat1 480039 480048 ATA_3 9
-hpat1 480050 480054 AT_2 4
+hpat1 480049 480053 TA_2 4
hpat1 480061 480065 AT_2 4
hpat1 480069 480077 GTTT_2 8
+hpat1 480101 480105 TT_2 4
+hpat1 480105 480109 CC_2 4
hpat1 480131 480135 GA_2 4
hpat1 480140 480144 TC_2 4
hpat1 480145 480149 CT_2 4
hpat1 480165 480169 CA_2 4
hpat1 480178 480182 TC_2 4
-hpat1 480298 480302 AG_2 4
+hpat1 480194 480206 CCTCCG_2 12
+hpat1 480219 480223 TC_2 4
+hpat1 480232 480238 CCT_2 6
+hpat1 480263 480269 CCA_2 6
+hpat1 480280 480284 TT_2 4
+hpat1 480288 480294 TT_3 6
+hpat1 480294 480300 TAG_2 6
hpat1 480354 480362 CTGC_2 8
-hpat1 480387 480391 TG_2 4
-hpat1 480436 480440 TA_2 4
+hpat1 480373 480377 AA_2 4
+hpat1 480386 480390 GT_2 4
+hpat1 480407 480411 TT_2 4
+hpat1 480411 480417 CC_3 6
+hpat1 480419 480423 TT_2 4
+hpat1 480435 480439 AT_2 4
hpat1 480449 480455 AT_3 6
+hpat1 480459 480463 TT_2 4
hpat1 480463 480467 GT_2 4
+hpat1 480477 480481 TT_2 4
hpat1 480485 480489 CT_2 4
hpat1 480489 480493 GA_2 4
hpat1 480523 480527 AT_2 4
+hpat1 480534 480538 TT_2 4
+hpat1 480543 480551 AACC_2 8
hpat1 480554 480558 TA_2 4
+hpat1 480574 480578 TT_2 4
+hpat1 480580 480584 AA_2 4
hpat1 480616 480622 GA_3 6
-hpat1 480633 480637 CA_2 4
+hpat1 480628 480634 TTC_2 6
+hpat1 480637 480641 TT_2 4
+hpat1 480665 480671 TT_3 6
+hpat1 480672 480676 TT_2 4
hpat1 480684 480690 TAA_2 6
hpat1 480691 480695 TG_2 4
+hpat1 480703 480707 TT_2 4
hpat1 480718 480722 GA_2 4
+hpat1 480739 480743 AT_2 4
+hpat1 480745 480749 AA_2 4
hpat1 480750 480756 CT_3 6
hpat1 480762 480766 AG_2 4
+hpat1 480766 480770 AA_2 4
+hpat1 480792 480796 TT_2 4
+hpat1 480807 480811 TT_2 4
+hpat1 480813 480817 CT_2 4
hpat1 480820 480830 ATTTC_2 10
+hpat1 480833 480839 CTT_2 6
+hpat1 480840 480844 CC_2 4
hpat1 480845 480853 CATT_2 8
-hpat1 480872 480881 GCT_3 9
+hpat1 480871 480880 TGC_3 9
hpat1 480898 480902 AT_2 4
+hpat1 480917 480921 TT_2 4
hpat1 480935 480939 CT_2 4
+hpat1 480953 480959 TTC_2 6
hpat1 480978 480986 TCCC_2 8
hpat1 480990 480996 CT_3 6
+hpat1 480996 481000 AA_2 4
+hpat1 481027 481031 TA_2 4
+hpat1 481039 481043 AA_2 4
+hpat1 481054 481058 CT_2 4
+hpat1 481074 481080 TT_3 6
+hpat1 481090 481094 AA_2 4
+hpat1 481106 481112 CCA_2 6
+hpat1 481133 481137 AA_2 4
hpat1 481170 481174 AT_2 4
-hpat1 481205 481211 TG_3 6
+hpat1 481174 481178 CC_2 4
+hpat1 481186 481192 GGT_2 6
+hpat1 481194 481198 CT_2 4
+hpat1 481204 481212 GT_4 8
+hpat1 481214 481218 AA_2 4
hpat1 481231 481239 ATAA_2 8
+hpat1 481250 481254 CC_2 4
hpat1 481254 481258 AG_2 4
-hpat1 481261 481267 ACA_2 6
+hpat1 481260 481264 CA_2 4
hpat1 481273 481279 TCA_2 6
+hpat1 481293 481299 AA_3 6
hpat1 481315 481319 TG_2 4
hpat1 481329 481333 CT_2 4
+hpat1 481338 481342 AA_2 4
hpat1 481352 481358 ACA_2 6
+hpat1 481378 481390 AAACAG_2 12
+hpat1 481392 481396 TT_2 4
hpat1 481399 481403 TA_2 4
hpat1 481403 481407 TC_2 4
hpat1 481418 481422 TG_2 4
hpat1 481422 481426 CA_2 4
+hpat1 481432 481436 TC_2 4
hpat1 481461 481467 TAT_2 6
-hpat1 481472 481476 AC_2 4
+hpat1 481471 481475 CA_2 4
hpat1 481479 481483 AC_2 4
-hpat1 481505 481509 AG_2 4
+hpat1 481488 481492 AA_2 4
+hpat1 481504 481510 GA_3 6
+hpat1 481511 481517 AGT_2 6
+hpat1 481518 481522 TC_2 4
+hpat1 481538 481546 AATA_2 8
hpat1 481550 481554 GA_2 4
hpat1 481572 481578 AGA_2 6
-hpat1 481631 481635 TA_2 4
+hpat1 481584 481588 TT_2 4
+hpat1 481608 481614 CTT_2 6
+hpat1 481618 481622 AT_2 4
+hpat1 481630 481634 AT_2 4
+hpat1 481635 481641 AAT_2 6
hpat1 481671 481679 CATT_2 8
+hpat1 481685 481689 AT_2 4
+hpat1 481690 481694 TC_2 4
hpat1 481718 481722 TG_2 4
hpat1 481722 481728 ACA_2 6
hpat1 481739 481743 GT_2 4
@@ -16927,51 +32262,101 @@
hpat1 481773 481781 ATAA_2 8
hpat1 481809 481813 TG_2 4
hpat1 481819 481827 ATCA_2 8
+hpat1 481836 481840 GG_2 4
hpat1 481847 481851 TC_2 4
hpat1 481851 481855 TG_2 4
hpat1 481869 481873 TG_2 4
+hpat1 481875 481881 AAT_2 6
hpat1 481889 481893 TG_2 4
+hpat1 481923 481929 AAT_2 6
+hpat1 481934 481938 AG_2 4
+hpat1 481946 481950 TT_2 4
+hpat1 481963 481967 TT_2 4
+hpat1 481969 481973 TT_2 4
hpat1 481978 481982 CA_2 4
+hpat1 481985 481989 CC_2 4
hpat1 482006 482010 AC_2 4
+hpat1 482019 482023 CA_2 4
hpat1 482033 482037 AG_2 4
hpat1 482049 482053 TC_2 4
hpat1 482071 482077 CT_3 6
hpat1 482083 482087 AG_2 4
+hpat1 482090 482094 TT_2 4
hpat1 482098 482102 AC_2 4
hpat1 482103 482109 GTT_2 6
+hpat1 482117 482121 TT_2 4
+hpat1 482128 482132 AA_2 4
hpat1 482141 482145 TA_2 4
hpat1 482154 482160 CAC_2 6
+hpat1 482166 482170 TT_2 4
hpat1 482191 482197 ATT_2 6
-hpat1 482214 482222 GAAA_2 8
+hpat1 482199 482203 CA_2 4
+hpat1 482205 482209 CC_2 4
+hpat1 482211 482219 AAAG_2 8
+hpat1 482219 482223 AA_2 4
+hpat1 482231 482237 TAC_2 6
+hpat1 482241 482245 CT_2 4
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hpat1 482288 482292 AG_2 4
+hpat1 482302 482306 CA_2 4
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+hpat1 482337 482343 AAT_2 6
+hpat1 482344 482348 TT_2 4
+hpat1 482369 482377 TTTG_2 8
hpat1 482378 482382 AT_2 4
hpat1 482394 482398 CT_2 4
hpat1 482398 482402 TG_2 4
hpat1 482402 482408 CAA_2 6
hpat1 482408 482414 CAG_2 6
hpat1 482423 482427 GT_2 4
+hpat1 482432 482436 AC_2 4
+hpat1 482445 482449 CA_2 4
+hpat1 482455 482459 AA_2 4
+hpat1 482480 482486 AAG_2 6
hpat1 482507 482513 TCA_2 6
hpat1 482556 482562 AGT_2 6
+hpat1 482571 482575 GG_2 4
+hpat1 482593 482601 TCAG_2 8
hpat1 482606 482612 GTT_2 6
hpat1 482625 482633 TCCT_2 8
hpat1 482676 482680 AT_2 4
+hpat1 482697 482705 CTTG_2 8
+hpat1 482706 482710 CA_2 4
hpat1 482740 482744 TC_2 4
hpat1 482750 482754 CA_2 4
hpat1 482755 482759 TC_2 4
+hpat1 482763 482767 GG_2 4
hpat1 482783 482789 CAG_2 6
hpat1 482801 482805 CT_2 4
-hpat1 482841 482847 CT_3 6
+hpat1 482830 482834 TT_2 4
+hpat1 482840 482846 TC_3 6
+hpat1 482863 482867 TG_2 4
hpat1 482882 482886 AT_2 4
+hpat1 482893 482897 CC_2 4
hpat1 482908 482916 GTAA_2 8
+hpat1 482917 482921 TT_2 4
hpat1 482932 482936 TA_2 4
hpat1 482947 482951 AC_2 4
hpat1 482974 482978 GA_2 4
+hpat1 482997 483001 TT_2 4
hpat1 483010 483014 CT_2 4
hpat1 483019 483023 GA_2 4
hpat1 483028 483032 TA_2 4
+hpat1 483051 483055 GT_2 4
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+hpat1 483069 483073 AA_2 4
+hpat1 483077 483081 AT_2 4
+hpat1 483092 483096 GG_2 4
+hpat1 483097 483101 CA_2 4
+hpat1 483111 483115 AT_2 4
+hpat1 483122 483126 GG_2 4
+hpat1 483153 483157 TT_2 4
+hpat1 483173 483177 TA_2 4
+hpat1 483188 483192 CC_2 4
hpat1 483208 483212 CA_2 4
hpat1 483225 483234 TAT_3 9
-hpat1 483242 483250 ATTT_2 8
+hpat1 483237 483241 TT_2 4
+hpat1 483241 483249 TATT_2 8
hpat1 483258 483262 AG_2 4
hpat1 483273 483277 CT_2 4
hpat1 483296 483300 TG_2 4
@@ -16980,378 +32365,708 @@
hpat1 483334 483338 GA_2 4
hpat1 483338 483344 TCC_2 6
hpat1 483347 483351 CA_2 4
+hpat1 483383 483389 CCA_2 6
+hpat1 483400 483404 TT_2 4
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hpat1 483416 483420 AG_2 4
hpat1 483426 483430 TC_2 4
hpat1 483455 483459 TC_2 4
hpat1 483473 483479 TCC_2 6
hpat1 483515 483519 CA_2 4
+hpat1 483519 483525 CCA_2 6
+hpat1 483544 483552 TT_4 8
hpat1 483555 483559 AG_2 4
+hpat1 483561 483565 GG_2 4
hpat1 483566 483570 TC_2 4
+hpat1 483591 483595 TT_2 4
hpat1 483597 483601 TC_2 4
hpat1 483615 483621 TCC_2 6
-hpat1 483682 483686 AT_2 4
-hpat1 483686 483690 AG_2 4
+hpat1 483669 483675 TTA_2 6
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+hpat1 483681 483687 TA_3 6
+hpat1 483694 483700 CTT_2 6
hpat1 483723 483729 CTG_2 6
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+hpat1 483758 483762 AA_2 4
+hpat1 483762 483768 AGA_2 6
+hpat1 483775 483781 AA_3 6
hpat1 483814 483818 TC_2 4
-hpat1 483925 483933 TCAC_2 8
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+hpat1 483834 483838 AT_2 4
+hpat1 483894 483900 AAT_2 6
+hpat1 483915 483919 TT_2 4
+hpat1 483924 483932 CTCA_2 8
hpat1 483965 483971 GTT_2 6
-hpat1 484008 484018 CATTA_2 10
-hpat1 484026 484030 GA_2 4
+hpat1 483994 483998 CT_2 4
+hpat1 484001 484005 TC_2 4
+hpat1 484007 484017 ACATT_2 10
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hpat1 484046 484050 CT_2 4
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hpat1 484057 484063 GAA_2 6
hpat1 484073 484079 AT_3 6
hpat1 484088 484092 TA_2 4
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hpat1 484138 484142 AC_2 4
hpat1 484147 484151 TA_2 4
-hpat1 484207 484211 TA_2 4
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+hpat1 484220 484226 TAG_2 6
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+hpat1 484320 484324 AA_2 4
hpat1 484351 484355 CT_2 4
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+hpat1 484388 484392 AG_2 4
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hpat1 484416 484420 AT_2 4
hpat1 484443 484447 GA_2 4
hpat1 484458 484462 CT_2 4
hpat1 484483 484489 TGC_2 6
hpat1 484531 484537 TCC_2 6
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hpat1 484600 484604 TC_2 4
hpat1 484621 484627 TCT_2 6
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hpat1 484658 484662 CT_2 4
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hpat1 484689 484693 TC_2 4
-hpat1 484719 484725 TA_3 6
+hpat1 484712 484718 TTA_2 6
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hpat1 484736 484746 ACTGG_2 10
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hpat1 484792 484796 TA_2 4
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hpat1 484816 484822 TG_3 6
hpat1 484855 484859 GA_2 4
hpat1 484861 484865 TC_2 4
-hpat1 484869 484873 AG_2 4
-hpat1 484877 484881 GT_2 4
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hpat1 484901 484909 TCCT_2 8
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hpat1 484930 484934 TA_2 4
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hpat1 484981 484989 ATAC_2 8
-hpat1 484991 484995 TA_2 4
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hpat1 485031 485035 AT_2 4
hpat1 485054 485060 GT_3 6
hpat1 485084 485090 CAG_2 6
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hpat1 485109 485113 GA_2 4
hpat1 485119 485123 TG_2 4
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hpat1 485274 485280 CAT_2 6
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hpat1 485292 485296 TG_2 4
-hpat1 485329 485335 AT_3 6
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hpat1 485335 485339 TA_2 4
hpat1 485349 485353 TG_2 4
hpat1 485361 485365 GT_2 4
-hpat1 485405 485417 CAAAAA_2 12
-hpat1 485417 485423 CA_3 6
+hpat1 485367 485371 AA_2 4
+hpat1 485379 485383 GG_2 4
+hpat1 485394 485398 GG_2 4
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+hpat1 485403 485415 AACAAA_2 12
+hpat1 485416 485422 AC_3 6
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hpat1 485467 485473 TGC_2 6
hpat1 485473 485479 GTG_2 6
hpat1 485500 485506 AGT_2 6
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hpat1 485538 485542 CT_2 4
hpat1 485543 485549 ATC_2 6
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hpat1 485585 485591 AGA_2 6
hpat1 485604 485608 TC_2 4
hpat1 485614 485618 CT_2 4
hpat1 485633 485637 GC_2 4
-hpat1 485681 485685 CA_2 4
+hpat1 485645 485657 CATCGG_2 12
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hpat1 485707 485711 TC_2 4
hpat1 485718 485724 AGA_2 6
hpat1 485737 485741 TG_2 4
hpat1 485749 485753 TC_2 4
hpat1 485756 485764 GAAA_2 8
hpat1 485784 485788 TA_2 4
-hpat1 485819 485825 TGA_2 6
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+hpat1 485830 485834 GG_2 4
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hpat1 485877 485881 TC_2 4
hpat1 485883 485887 CT_2 4
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hpat1 485915 485921 CAC_2 6
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hpat1 485944 485948 GT_2 4
hpat1 485948 485954 GAT_2 6
-hpat1 485966 485970 TC_2 4
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hpat1 486005 486011 CTT_2 6
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+hpat1 486063 486069 TT_3 6
hpat1 486070 486074 AG_2 4
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hpat1 486088 486092 GT_2 4
hpat1 486112 486120 CTTA_2 8
hpat1 486124 486128 CA_2 4
hpat1 486132 486140 GAAG_2 8
+hpat1 486140 486144 AA_2 4
hpat1 486144 486148 TG_2 4
hpat1 486149 486153 CA_2 4
hpat1 486157 486161 TC_2 4
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hpat1 486180 486184 TG_2 4
-hpat1 486219 486227 GAAA_2 8
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+hpat1 486224 486230 AA_3 6
hpat1 486252 486256 AC_2 4
-hpat1 486278 486284 TCA_2 6
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hpat1 486374 486378 TA_2 4
-hpat1 486443 486449 CAA_2 6
-hpat1 486468 486472 GT_2 4
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hpat1 486474 486478 CA_2 4
hpat1 486508 486512 CA_2 4
hpat1 486520 486524 TG_2 4
-hpat1 486543 486551 GCTG_2 8
-hpat1 486572 486576 TC_2 4
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hpat1 486591 486595 GT_2 4
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hpat1 486618 486622 TC_2 4
-hpat1 486680 486690 CATAA_2 10
-hpat1 486690 486696 TAA_2 6
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hpat1 486718 486722 CT_2 4
hpat1 486743 486747 GA_2 4
hpat1 486748 486752 AG_2 4
hpat1 486757 486761 CT_2 4
hpat1 486781 486787 GTG_2 6
-hpat1 486832 486836 CT_2 4
-hpat1 486908 486912 AG_2 4
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hpat1 486925 486929 GT_2 4
hpat1 486941 486945 TC_2 4
hpat1 486947 486951 TC_2 4
hpat1 486964 486972 CTGC_2 8
hpat1 486995 486999 CT_2 4
hpat1 486999 487003 TA_2 4
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hpat1 487035 487039 AG_2 4
hpat1 487040 487044 AT_2 4
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+hpat1 487101 487105 TT_2 4
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hpat1 487116 487122 GAG_2 6
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+hpat1 487147 487151 TA_2 4
+hpat1 487156 487168 TT_6 12
hpat1 487169 487173 GA_2 4
hpat1 487174 487178 AG_2 4
hpat1 487183 487187 CT_2 4
hpat1 487202 487206 GT_2 4
hpat1 487216 487220 TC_2 4
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hpat1 487367 487371 TC_2 4
hpat1 487392 487400 GCCT_2 8
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hpat1 487534 487538 TG_2 4
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hpat1 487682 487686 CT_2 4
hpat1 487692 487696 AT_2 4
hpat1 487703 487713 CAGCC_2 10
hpat1 487713 487717 AT_2 4
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hpat1 487766 487770 TG_2 4
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hpat1 487816 487820 AT_2 4
hpat1 487822 487826 CT_2 4
hpat1 487839 487849 CATCT_2 10
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hpat1 487999 488005 TGA_2 6
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hpat1 488139 488143 GT_2 4
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hpat1 488169 488175 CTG_2 6
hpat1 488183 488187 TA_2 4
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hpat1 488341 488347 ATA_2 6
hpat1 488351 488357 TCT_2 6
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hpat1 488423 488427 AG_2 4
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hpat1 488467 488473 CTG_2 6
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hpat1 488514 488518 CT_2 4
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hpat1 488671 488675 TA_2 4
hpat1 488678 488682 AC_2 4
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hpat1 488706 488710 TA_2 4
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hpat1 488781 488785 CA_2 4
hpat1 488792 488798 AGA_2 6
hpat1 488805 488809 AT_2 4
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hpat1 488833 488837 AG_2 4
hpat1 488837 488843 ATT_2 6
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hpat1 488867 488873 TC_3 6
hpat1 488890 488898 TATG_2 8
hpat1 488900 488904 CA_2 4
hpat1 488914 488918 CA_2 4
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hpat1 488968 488972 CT_2 4
hpat1 488988 488994 CAC_2 6
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hpat1 489016 489025 TCC_3 9
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hpat1 489094 489102 ATGC_2 8
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hpat1 489108 489112 TG_2 4
hpat1 489113 489117 CT_2 4
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hpat1 489145 489149 AT_2 4
hpat1 489157 489161 AT_2 4
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hpat1 489178 489182 CA_2 4
hpat1 489193 489197 TC_2 4
hpat1 489201 489209 GTAT_2 8
hpat1 489209 489213 AT_2 4
hpat1 489213 489219 AC_3 6
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hpat1 489225 489229 GT_2 4
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hpat1 489248 489252 GA_2 4
hpat1 489257 489261 TC_2 4
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hpat1 489336 489342 TCC_2 6
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hpat1 489375 489379 CA_2 4
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hpat1 489441 489447 ACT_2 6
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hpat1 489496 489500 AT_2 4
hpat1 489510 489514 AT_2 4
hpat1 489525 489531 CT_3 6
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hpat1 489566 489570 CA_2 4
hpat1 489577 489581 TG_2 4
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hpat1 489605 489609 AC_2 4
hpat1 489634 489638 AC_2 4
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hpat1 489690 489694 AC_2 4
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hpat1 489713 489717 TA_2 4
hpat1 489717 489723 CTC_2 6
hpat1 489731 489735 AT_2 4
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hpat1 489755 489761 AGT_2 6
hpat1 489764 489768 TG_2 4
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hpat1 489785 489789 CA_2 4
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hpat1 489832 489838 ACA_2 6
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hpat1 489851 489857 GCA_2 6
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hpat1 489967 489971 AT_2 4
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hpat1 490062 490066 GA_2 4
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hpat1 490190 490196 AGG_2 6
hpat1 490214 490218 GA_2 4
hpat1 490219 490223 CG_2 4
hpat1 490247 490251 AG_2 4
hpat1 490252 490256 GA_2 4
-hpat1 490264 490274 CAAAA_2 10
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hpat1 490298 490306 CTTA_2 8
hpat1 490332 490336 AG_2 4
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hpat1 490386 490390 TA_2 4
hpat1 490391 490395 GT_2 4
hpat1 490395 490399 TA_2 4
hpat1 490403 490407 GA_2 4
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hpat1 490453 490457 TG_2 4
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hpat1 490496 490500 CA_2 4
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hpat1 490541 490545 AG_2 4
hpat1 490558 490562 TG_2 4
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hpat1 490611 490615 AT_2 4
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hpat1 490649 490653 AG_2 4
hpat1 490660 490666 CAA_2 6
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hpat1 490705 490709 GA_2 4
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hpat1 490735 490739 TG_2 4
hpat1 490746 490754 GTTT_2 8
hpat1 490768 490772 CA_2 4
hpat1 490792 490796 AC_2 4
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hpat1 490840 490844 TG_2 4
hpat1 490845 490851 CTC_2 6
hpat1 490864 490868 AG_2 4
hpat1 490874 490882 ATTT_2 8
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hpat1 490976 490980 CT_2 4
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hpat1 490993 490997 TA_2 4
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hpat1 491092 491100 ATTT_2 8
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hpat1 491165 491169 TA_2 4
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hpat1 491190 491194 TC_2 4
hpat1 491207 491211 GA_2 4
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hpat1 491231 491237 ATT_2 6
hpat1 491237 491241 TG_2 4
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hpat1 491317 491321 TG_2 4
hpat1 491322 491326 AC_2 4
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hpat1 491472 491476 TC_2 4
hpat1 491477 491481 CT_2 4
hpat1 491493 491497 AG_2 4
-hpat1 491505 491509 CG_2 4
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hpat1 491510 491514 TC_2 4
hpat1 491543 491547 CA_2 4
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hpat1 491571 491577 AGC_2 6
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hpat1 491634 491640 CGG_2 6
hpat1 491649 491653 GT_2 4
hpat1 491665 491669 TC_2 4
hpat1 491671 491675 TC_2 4
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hpat1 491789 491795 GT_3 6
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hpat1 491871 491875 CA_2 4
hpat1 491920 491924 TC_2 4
hpat1 491924 491930 CAA_2 6
hpat1 491930 491934 GA_2 4
-hpat1 491947 491951 GA_2 4
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hpat1 491977 491981 GA_2 4
hpat1 491991 491995 CT_2 4
hpat1 492024 492028 TC_2 4
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hpat1 492085 492091 TAG_2 6
hpat1 492104 492112 CACC_2 8
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hpat1 492162 492166 GT_2 4
hpat1 492178 492182 TC_2 4
hpat1 492184 492188 TC_2 4
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hpat1 492274 492280 AT_3 6
hpat1 492304 492308 GT_2 4
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-hpat1 492368 492374 CAG_2 6
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hpat1 492418 492422 TA_2 4
hpat1 492451 492455 CT_2 4
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hpat1 492470 492476 GTA_2 6
hpat1 492481 492485 CA_2 4
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hpat1 492500 492504 TA_2 4
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hpat1 492525 492529 AT_2 4
hpat1 492533 492537 AT_2 4
hpat1 492539 492543 TG_2 4
hpat1 492559 492563 AG_2 4
hpat1 492564 492570 TAA_2 6
hpat1 492572 492576 AG_2 4
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hpat1 492630 492634 AG_2 4
hpat1 492641 492645 CT_2 4
hpat1 492645 492651 GAA_2 6
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hpat1 492782 492790 TGAA_2 8
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hpat1 492816 492822 ACA_2 6
hpat1 492822 492828 TAA_2 6
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hpat1 492893 492903 ACAAA_2 10
hpat1 492907 492915 AGCA_2 8
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hpat1 492944 492948 CT_2 4
hpat1 493011 493015 TA_2 4
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hpat1 493024 493028 GT_2 4
hpat1 493033 493037 AG_2 4
hpat1 493046 493050 TG_2 4
-hpat1 493056 493062 GAG_2 6
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hpat1 493079 493085 TAA_2 6
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hpat1 493155 493159 AG_2 4
hpat1 493239 493243 GA_2 4
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hpat1 493271 493277 AGG_2 6
hpat1 493295 493299 GA_2 4
hpat1 493300 493304 CA_2 4
-hpat1 493306 493316 ACTGC_2 10
+hpat1 493305 493315 CACTG_2 10
hpat1 493328 493332 AG_2 4
-hpat1 493346 493356 AC_5 10
+hpat1 493345 493357 CA_6 12
hpat1 493358 493362 AC_2 4
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hpat1 493447 493451 CA_2 4
hpat1 493460 493464 AT_2 4
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hpat1 493506 493514 CTTT_2 8
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hpat1 493541 493545 CA_2 4
+hpat1 493575 493579 CA_2 4
hpat1 493614 493618 CA_2 4
hpat1 493618 493622 GA_2 4
hpat1 493625 493631 AGG_2 6
-hpat1 493636 493640 CA_2 4
+hpat1 493635 493639 AC_2 4
hpat1 493708 493712 TC_2 4
-hpat1 493748 493754 TCA_2 6
+hpat1 493746 493750 TC_2 4
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hpat1 493786 493792 TCC_2 6
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hpat1 493859 493865 TC_3 6
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+hpat1 493906 493914 AAGC_2 8
+hpat1 493925 493929 TT_2 4
hpat1 493981 493985 GA_2 4
hpat1 493987 493991 TG_2 4
hpat1 494000 494004 AG_2 4
@@ -17360,575 +33075,1155 @@
hpat1 494048 494052 TA_2 4
hpat1 494075 494079 TG_2 4
hpat1 494084 494090 TAA_2 6
-hpat1 494109 494113 CA_2 4
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+hpat1 494138 494142 AA_2 4
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hpat1 494200 494206 CT_3 6
hpat1 494206 494210 TA_2 4
hpat1 494234 494238 TG_2 4
hpat1 494264 494268 TG_2 4
hpat1 494280 494284 AT_2 4
hpat1 494285 494291 CAT_2 6
+hpat1 494293 494297 AA_2 4
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hpat1 494361 494365 CT_2 4
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hpat1 494406 494410 CA_2 4
hpat1 494431 494435 TA_2 4
hpat1 494435 494439 CA_2 4
hpat1 494442 494446 AG_2 4
-hpat1 494501 494509 GAGT_2 8
+hpat1 494455 494459 TT_2 4
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hpat1 509231 509235 AG_2 4
+hpat1 509244 509248 AA_2 4
hpat1 509269 509273 GT_2 4
+hpat1 509279 509283 AA_2 4
hpat1 509291 509295 TA_2 4
+hpat1 509305 509309 AA_2 4
hpat1 509320 509326 CTT_2 6
hpat1 509326 509330 TA_2 4
+hpat1 509347 509351 TT_2 4
hpat1 509353 509357 AT_2 4
hpat1 509374 509378 CA_2 4
+hpat1 509392 509396 AA_2 4
+hpat1 509399 509403 AA_2 4
+hpat1 509411 509415 CA_2 4
hpat1 509421 509425 TA_2 4
hpat1 509425 509435 ATGTT_2 10
hpat1 509435 509439 CA_2 4
+hpat1 509468 509472 AA_2 4
+hpat1 509474 509478 AA_2 4
+hpat1 509501 509505 AA_2 4
hpat1 509510 509514 TA_2 4
hpat1 509532 509538 TAC_2 6
hpat1 509542 509548 TAA_2 6
hpat1 509565 509573 AC_4 8
+hpat1 509581 509587 TGA_2 6
hpat1 509588 509592 TC_2 4
hpat1 509592 509596 AG_2 4
hpat1 509605 509613 TGAA_2 8
hpat1 509622 509626 TC_2 4
-hpat1 509655 509659 AT_2 4
+hpat1 509626 509630 AA_2 4
+hpat1 509654 509658 TA_2 4
+hpat1 509669 509673 AA_2 4
+hpat1 509676 509680 AA_2 4
+hpat1 509742 509750 GGAT_2 8
hpat1 509750 509754 CA_2 4
+hpat1 509761 509765 GA_2 4
hpat1 509767 509771 GA_2 4
+hpat1 509783 509787 AC_2 4
+hpat1 509794 509798 CC_2 4
hpat1 509799 509803 TC_2 4
-hpat1 509812 509816 TA_2 4
-hpat1 509835 509841 TGG_2 6
+hpat1 509807 509811 AA_2 4
+hpat1 509811 509815 AT_2 4
+hpat1 509815 509821 AA_3 6
+hpat1 509833 509839 GGT_2 6
hpat1 509841 509845 GC_2 4
+hpat1 509856 509862 ACT_2 6
hpat1 509887 509891 GA_2 4
hpat1 509920 509924 AG_2 4
hpat1 509934 509938 TC_2 4
hpat1 509963 509969 GTA_2 6
hpat1 509972 509982 CAGAA_2 10
hpat1 509993 509997 AG_2 4
+hpat1 510001 510005 GG_2 4
hpat1 510047 510051 AT_2 4
+hpat1 510070 510074 TG_2 4
hpat1 510092 510100 TATG_2 8
+hpat1 510104 510108 AA_2 4
hpat1 510120 510124 TA_2 4
hpat1 510124 510128 CA_2 4
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hpat1 510146 510150 TG_2 4
+hpat1 510159 510167 AA_4 8
+hpat1 510171 510177 AA_3 6
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hpat1 510193 510197 CA_2 4
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hpat1 510209 510213 GA_2 4
hpat1 510232 510238 GCT_2 6
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hpat1 510332 510336 TC_2 4
-hpat1 510362 510366 TG_2 4
-hpat1 510366 510372 GTG_2 6
+hpat1 510340 510344 AA_2 4
+hpat1 510348 510352 AA_2 4
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hpat1 510388 510394 GCT_2 6
hpat1 510397 510401 AG_2 4
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hpat1 510426 510430 CT_2 4
hpat1 510431 510435 GA_2 4
+hpat1 510478 510482 GA_2 4
hpat1 510483 510487 AG_2 4
-hpat1 510531 510539 TAAA_2 8
-hpat1 510539 510543 AG_2 4
-hpat1 510559 510563 TG_2 4
+hpat1 510497 510501 TC_2 4
+hpat1 510501 510519 AA_9 18
+hpat1 510520 510526 TAA_2 6
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+hpat1 510536 510540 AA_2 4
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+hpat1 510558 510562 GT_2 4
hpat1 510588 510592 GA_2 4
-hpat1 510605 510609 CA_2 4
+hpat1 510604 510608 AC_2 4
hpat1 510620 510624 TC_2 4
-hpat1 510634 510649 CAA_5 15
-hpat1 510651 510655 CA_2 4
-hpat1 510668 510672 TG_2 4
+hpat1 510629 510633 AA_2 4
+hpat1 510633 510648 ACA_5 15
+hpat1 510650 510654 AC_2 4
+hpat1 510654 510658 AA_2 4
+hpat1 510667 510671 GT_2 4
hpat1 510684 510688 TA_2 4
hpat1 510701 510707 AGG_2 6
+hpat1 510716 510720 GA_2 4
hpat1 510733 510739 AGG_2 6
+hpat1 510774 510778 GA_2 4
hpat1 510783 510787 TC_2 4
hpat1 510808 510812 GA_2 4
+hpat1 510819 510823 AA_2 4
+hpat1 510826 510830 GG_2 4
hpat1 510830 510836 TA_3 6
-hpat1 510838 510842 AT_2 4
-hpat1 510842 510846 AC_2 4
+hpat1 510837 510843 TA_3 6
hpat1 510850 510854 TA_2 4
hpat1 510869 510873 CA_2 4
hpat1 510873 510879 AT_3 6
+hpat1 510886 510890 AT_2 4
+hpat1 510917 510921 AG_2 4
hpat1 510926 510930 CA_2 4
-hpat1 511006 511010 CA_2 4
+hpat1 510935 510939 GG_2 4
+hpat1 510953 510957 GA_2 4
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+hpat1 511005 511009 AC_2 4
hpat1 511022 511026 TC_2 4
+hpat1 511031 511035 AA_2 4
+hpat1 511039 511043 AA_2 4
hpat1 511058 511066 TGCA_2 8
hpat1 511068 511072 TG_2 4
hpat1 511102 511106 TG_2 4
@@ -17936,126 +34231,246 @@
hpat1 511144 511148 GT_2 4
hpat1 511165 511173 GACA_2 8
hpat1 511173 511177 CT_2 4
+hpat1 511182 511186 AA_2 4
hpat1 511186 511198 TCAA_3 12
+hpat1 511202 511206 TT_2 4
+hpat1 511210 511218 AA_4 8
hpat1 511226 511230 TA_2 4
hpat1 511230 511234 GA_2 4
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hpat1 511253 511257 AT_2 4
-hpat1 511314 511318 TG_2 4
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hpat1 511387 511391 GA_2 4
hpat1 511410 511414 GA_2 4
-hpat1 511423 511427 TA_2 4
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+hpat1 511424 511436 ATAAAA_2 12
+hpat1 511437 511441 TT_2 4
+hpat1 511441 511445 AA_2 4
+hpat1 511454 511458 GC_2 4
hpat1 511485 511489 TG_2 4
+hpat1 511498 511506 GGCG_2 8
hpat1 511518 511524 AGA_2 6
hpat1 511526 511530 GA_2 4
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hpat1 511558 511562 TC_2 4
+hpat1 511566 511570 AA_2 4
+hpat1 511574 511578 AA_2 4
hpat1 511590 511596 TGG_2 6
+hpat1 511599 511603 GC_2 4
hpat1 511621 511627 AGG_2 6
-hpat1 511636 511640 GA_2 4
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hpat1 511660 511664 AG_2 4
hpat1 511677 511681 GA_2 4
hpat1 511710 511714 AG_2 4
hpat1 511715 511719 GA_2 4
hpat1 511724 511728 TC_2 4
+hpat1 511728 511744 AA_8 16
+hpat1 511746 511756 AA_5 10
hpat1 511756 511765 TAA_3 9
hpat1 511771 511775 TG_2 4
hpat1 511775 511779 CA_2 4
-hpat1 511826 511830 TG_2 4
+hpat1 511801 511805 AC_2 4
+hpat1 511825 511829 GT_2 4
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hpat1 511878 511882 GA_2 4
hpat1 511887 511891 TC_2 4
-hpat1 511942 511946 TG_2 4
+hpat1 511893 511899 TT_3 6
+hpat1 511905 511909 AA_2 4
+hpat1 511941 511945 GT_2 4
hpat1 511958 511962 TG_2 4
hpat1 511982 511986 GA_2 4
+hpat1 511988 511994 GGA_2 6
+hpat1 511994 511998 AC_2 4
hpat1 512006 512012 AGG_2 6
hpat1 512029 512033 TG_2 4
hpat1 512047 512051 CT_2 4
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+hpat1 512087 512091 AA_2 4
+hpat1 512111 512115 AA_2 4
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hpat1 512137 512141 AC_2 4
hpat1 512141 512145 AT_2 4
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hpat1 512171 512175 AG_2 4
+hpat1 512186 512192 AA_3 6
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hpat1 512201 512207 GCA_2 6
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hpat1 512345 512349 GA_2 4
hpat1 512363 512367 AG_2 4
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hpat1 512379 512383 TC_2 4
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hpat1 512414 512420 TGG_2 6
hpat1 512485 512489 GA_2 4
hpat1 512508 512512 GA_2 4
hpat1 512517 512521 TC_2 4
-hpat1 512538 512544 TAA_2 6
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+hpat1 512535 512544 TAA_3 9
+hpat1 512553 512559 AA_3 6
hpat1 512580 512586 AGG_2 6
hpat1 512653 512657 CT_2 4
hpat1 512669 512673 AG_2 4
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+hpat1 512694 512700 GG_3 6
+hpat1 512700 512706 GAA_2 6
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hpat1 512719 512723 GT_2 4
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+hpat1 512735 512745 AA_5 10
+hpat1 512755 512759 GT_2 4
hpat1 512810 512814 CA_2 4
hpat1 512827 512831 GA_2 4
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hpat1 512859 512863 TC_2 4
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+hpat1 512914 512920 CAG_2 6
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hpat1 512960 512964 AG_2 4
hpat1 512977 512981 GA_2 4
hpat1 513012 513016 GA_2 4
hpat1 513016 513020 CT_2 4
hpat1 513021 513025 TC_2 4
-hpat1 513032 513040 GAAA_2 8
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hpat1 513044 513060 GA_8 16
-hpat1 513062 513072 GA_5 10
-hpat1 513072 513080 CAGA_2 8
-hpat1 513080 513122 GA_21 42
+hpat1 513061 513071 AG_5 10
+hpat1 513071 513079 ACAG_2 8
+hpat1 513079 513121 AG_21 42
+hpat1 513126 513130 AT_2 4
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hpat1 513296 513302 AGA_2 6
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hpat1 513367 513371 AC_2 4
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hpat1 513457 513461 CA_2 4
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hpat1 513510 513516 CTC_2 6
hpat1 513522 513526 TC_2 4
hpat1 513526 513530 TG_2 4
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hpat1 513560 513568 TGCT_2 8
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hpat1 513623 513627 CA_2 4
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hpat1 513694 513698 AT_2 4
hpat1 513699 513705 CT_3 6
hpat1 513713 513717 CA_2 4
hpat1 513722 513726 TG_2 4
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hpat1 513742 513748 CT_3 6
hpat1 513781 513789 ATTT_2 8
hpat1 513789 513793 CT_2 4
hpat1 513793 513799 TGG_2 6
+hpat1 513802 513806 CC_2 4
hpat1 513806 513810 GT_2 4
hpat1 513812 513818 CAC_2 6
hpat1 513832 513836 TC_2 4
hpat1 513905 513909 TG_2 4
hpat1 513916 513920 TG_2 4
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hpat1 513932 513938 CTC_2 6
hpat1 513947 513951 TA_2 4
hpat1 513961 513969 CATC_2 8
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hpat1 514018 514022 TG_2 4
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hpat1 514091 514095 TG_2 4
hpat1 514100 514104 CA_2 4
hpat1 514123 514127 AG_2 4
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hpat1 514179 514185 CAT_2 6
hpat1 514193 514201 AGAA_2 8
hpat1 514206 514210 AC_2 4
hpat1 514241 514245 AT_2 4
+hpat1 514253 514261 ACCT_2 8
hpat1 514270 514274 GA_2 4
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+hpat1 514314 514320 CTT_2 6
hpat1 514328 514334 TGG_2 6
-hpat1 514355 514361 ATC_2 6
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hpat1 514387 514393 TAA_2 6
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hpat1 514474 514478 AT_2 4
hpat1 514480 514484 TG_2 4
hpat1 514493 514501 GTCA_2 8
-hpat1 514526 514534 GT_4 8
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hpat1 514546 514550 CT_2 4
+hpat1 514558 514566 GGGT_2 8
hpat1 514598 514607 TCC_3 9
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hpat1 514640 514644 AC_2 4
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hpat1 514680 514692 CTTT_3 12
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hpat1 514705 514709 GA_2 4
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hpat1 514779 514785 TCC_2 6
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hpat1 514930 514934 AG_2 4
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hpat1 514963 514967 CA_2 4
-hpat1 515016 515020 CA_2 4
+hpat1 514972 514978 TTC_2 6
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+hpat1 515117 515121 TT_2 4
hpat1 515124 515132 TGTT_2 8
hpat1 515135 515139 AG_2 4
hpat1 515174 515180 GTG_2 6
@@ -18063,150 +34478,292 @@
hpat1 515203 515207 CT_2 4
hpat1 515215 515219 TC_2 4
hpat1 515250 515259 CAC_3 9
+hpat1 515268 515284 TT_8 16
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hpat1 515343 515349 TCC_2 6
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hpat1 515433 515437 TG_2 4
hpat1 515475 515479 TG_2 4
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hpat1 515500 515504 TA_2 4
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hpat1 515631 515635 GA_2 4
hpat1 515650 515654 TG_2 4
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hpat1 515720 515724 AT_2 4
hpat1 515757 515763 TCT_2 6
hpat1 515774 515778 TG_2 4
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hpat1 515796 515800 CA_2 4
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hpat1 515810 515816 TGT_2 6
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hpat1 515847 515851 TG_2 4
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hpat1 515894 515900 AGA_2 6
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hpat1 515914 515918 TG_2 4
hpat1 515925 515931 TGA_2 6
hpat1 515944 515950 TAT_2 6
hpat1 515951 515955 TG_2 4
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+hpat1 515971 515975 GG_2 4
+hpat1 515983 515989 AT_3 6
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hpat1 516013 516019 ACT_2 6
hpat1 516020 516026 TG_3 6
hpat1 516026 516030 TA_2 4
hpat1 516030 516034 TC_2 4
hpat1 516044 516048 CA_2 4
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hpat1 516065 516069 GA_2 4
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hpat1 516091 516097 TCA_2 6
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hpat1 516137 516141 TA_2 4
hpat1 516143 516147 CA_2 4
hpat1 516151 516155 TG_2 4
hpat1 516162 516168 CAC_2 6
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hpat1 516217 516221 AG_2 4
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hpat1 516295 516301 TAT_2 6
hpat1 516309 516313 CA_2 4
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hpat1 516375 516381 GTT_2 6
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hpat1 516424 516428 TA_2 4
hpat1 516435 516439 CA_2 4
hpat1 516463 516467 AT_2 4
hpat1 516475 516479 TC_2 4
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hpat1 516489 516495 CTA_2 6
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hpat1 516516 516520 AT_2 4
hpat1 516520 516524 GT_2 4
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hpat1 516563 516567 AG_2 4
hpat1 516578 516582 CT_2 4
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hpat1 516635 516639 CA_2 4
hpat1 516656 516662 TCC_2 6
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hpat1 516768 516772 TC_2 4
hpat1 516791 516797 ATC_2 6
hpat1 516815 516819 GT_2 4
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hpat1 516853 516857 CA_2 4
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hpat1 516897 516901 CA_2 4
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hpat1 516929 516937 AGGC_2 8
hpat1 516978 516984 ATG_2 6
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hpat1 517042 517046 TC_2 4
hpat1 517062 517066 GA_2 4
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hpat1 517093 517097 AG_2 4
hpat1 517110 517114 GA_2 4
hpat1 517115 517119 CG_2 4
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hpat1 517158 517162 TC_2 4
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hpat1 517210 517214 CA_2 4
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hpat1 517289 517295 AGG_2 6
hpat1 517301 517309 AGGT_2 8
hpat1 517309 517317 CTGT_2 8
hpat1 517330 517334 CT_2 4
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hpat1 517363 517367 AT_2 4
hpat1 517374 517378 TG_2 4
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hpat1 517394 517398 CT_2 4
hpat1 517406 517410 AC_2 4
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hpat1 517442 517446 CT_2 4
hpat1 517460 517470 GACTC_2 10
hpat1 517485 517493 CAAT_2 8
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hpat1 517542 517546 CT_2 4
hpat1 517556 517560 AC_2 4
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hpat1 517585 517591 CAA_2 6
hpat1 517592 517596 GA_2 4
hpat1 517610 517616 CT_3 6
hpat1 517624 517630 TA_3 6
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hpat1 517803 517807 TA_2 4
hpat1 517821 517829 GAAG_2 8
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hpat1 517856 517860 AG_2 4
hpat1 517863 517867 GA_2 4
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hpat1 517939 517943 AG_2 4
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hpat1 517979 517983 CA_2 4
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hpat1 518017 518023 ACT_2 6
hpat1 518041 518045 CA_2 4
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hpat1 518062 518066 AT_2 4
hpat1 518077 518081 TG_2 4
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hpat1 518105 518111 AG_3 6
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hpat1 518146 518152 ATT_2 6
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hpat1 518191 518195 AT_2 4
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hpat1 518259 518263 GA_2 4
hpat1 518268 518272 TC_2 4
hpat1 518273 518277 CT_2 4
hpat1 518305 518309 CT_2 4
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hpat1 518387 518391 GC_2 4
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hpat1 518590 518594 CA_2 4
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hpat1 518616 518620 CT_2 4
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hpat1 518677 518681 AG_2 4
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hpat1 518731 518735 AC_2 4
hpat1 518740 518744 GA_2 4
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hpat1 518797 518803 GCA_2 6
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hpat1 518872 518876 TA_2 4
hpat1 518914 518920 ATC_2 6
hpat1 518936 518940 AC_2 4
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hpat1 519068 519072 AT_2 4
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hpat1 519149 519153 AT_2 4
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hpat1 519249 519255 CT_3 6
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hpat1 519370 519374 CT_2 4
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hpat1 519485 519493 TACA_2 8
hpat1 519499 519505 ACA_2 6
hpat1 519505 519513 TGTT_2 8
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hpat1 519526 519530 CA_2 4
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hpat1 519547 519553 CA_3 6
hpat1 519604 519610 AGG_2 6
hpat1 519611 519615 AG_2 4
@@ -18214,506 +34771,967 @@
hpat1 519661 519665 AG_2 4
hpat1 519666 519670 GA_2 4
hpat1 519675 519679 TC_2 4
-hpat1 519687 519703 TACA_4 16
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hpat1 519719 519723 AC_2 4
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hpat1 519793 519797 GT_2 4
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hpat1 519838 519842 GT_2 4
hpat1 519845 519849 TG_2 4
hpat1 519869 519873 GT_2 4
hpat1 519877 519881 TC_2 4
hpat1 519899 519905 AGA_2 6
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hpat1 519977 519981 TC_2 4
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hpat1 519992 519998 TCA_2 6
hpat1 520000 520004 TA_2 4
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hpat1 520233 520237 AG_2 4
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hpat1 520386 520390 TA_2 4
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hpat1 520462 520468 ATT_2 6
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hpat1 520505 520509 TA_2 4
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hpat1 520576 520580 GA_2 4
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hpat1 520593 520601 GCTG_2 8
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hpat1 520627 520631 GT_2 4
hpat1 520644 520650 CAA_2 6
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hpat1 520682 520686 TG_2 4
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hpat1 520743 520751 TGTA_2 8
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hpat1 520759 520763 AT_2 4
hpat1 520796 520800 TG_2 4
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hpat1 520902 520906 AG_2 4
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hpat1 520982 520986 GC_2 4
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hpat1 521092 521096 AG_2 4
hpat1 521097 521101 GA_2 4
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hpat1 521173 521177 GT_2 4
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hpat1 521231 521235 GA_2 4
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hpat1 521477 521481 CA_2 4
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hpat1 521539 521543 AC_2 4
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hpat1 521655 521659 AC_2 4
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hpat1 521726 521732 AGG_2 6
hpat1 521734 521740 GA_3 6
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hpat1 521931 521937 GA_3 6
hpat1 521946 521950 AG_2 4
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hpat1 521985 521989 AT_2 4
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hpat1 522001 522005 AT_2 4
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hpat1 522108 522112 GA_2 4
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hpat1 522176 522180 AC_2 4
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hpat1 522257 522265 CACC_2 8
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hpat1 522305 522309 TC_2 4
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hpat1 522325 522329 CT_2 4
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hpat1 522356 522362 GAA_2 6
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hpat1 522527 522535 AGGT_2 8
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hpat1 522559 522565 GAA_2 6
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hpat1 522947 522953 CTG_2 6
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hpat1 523200 523206 TAA_2 6
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hpat1 523253 523259 AGC_2 6
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hpat1 523282 523288 CA_3 6
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hpat1 523361 523365 AT_2 4
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hpat1 523387 523393 CAC_2 6
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hpat1 523494 523498 CT_2 4
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hpat1 523570 523574 TG_2 4
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hpat1 523627 523631 TA_2 4
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hpat1 523663 523669 CAG_2 6
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hpat1 523690 523694 AG_2 4
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hpat1 523713 523721 GCTG_2 8
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hpat1 523796 523800 TA_2 4
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hpat1 523814 523818 CT_2 4
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hpat1 523894 523898 CA_2 4
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hpat1 523948 523952 AT_2 4
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hpat1 524010 524014 AT_2 4
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hpat1 524057 524061 GA_2 4
hpat1 524071 524075 CT_2 4
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hpat1 524117 524125 CAAC_2 8
hpat1 524130 524134 TC_2 4
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hpat1 524210 524214 AG_2 4
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hpat1 524402 524406 CT_2 4
hpat1 524412 524416 GA_2 4
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hpat1 524567 524575 CTTC_2 8
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hpat1 524602 524606 AT_2 4
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hpat1 524686 524692 TGA_2 6
hpat1 524705 524709 CT_2 4
hpat1 524715 524721 CAA_2 6
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hpat1 524799 524805 AG_3 6
hpat1 524818 524822 CA_2 4
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hpat1 524843 524847 TC_2 4
hpat1 524847 524851 CT_2 4
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hpat1 532517 532521 CA_2 4
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hpat1 532565 532585 CT_10 20
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hpat1 534426 534430 AG_2 4
hpat1 534443 534447 GA_2 4
hpat1 534450 534456 CAC_2 6
@@ -18721,458 +35739,836 @@
hpat1 534480 534484 CG_2 4
hpat1 534485 534489 CT_2 4
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hpat1 539999 540005 AGG_2 6
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hpat1 546399 546405 GA_3 6
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hpat1 546492 546504 AGCCTC_2 12
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hpat1 546598 546602 TC_2 4
hpat1 546605 546609 CT_2 4
hpat1 546622 546626 TC_2 4
@@ -19180,344 +36576,660 @@
hpat1 546670 546674 GT_2 4
hpat1 546680 546684 TC_2 4
hpat1 546686 546690 CA_2 4
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hpat1 546696 546700 CT_2 4
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hpat1 554511 554517 AGC_2 6
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hpat1 554565 554571 TGC_2 6
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hpat1 554635 554639 GT_2 4
hpat1 554659 554663 AG_2 4
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hpat1 554876 554882 TGC_2 6
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hpat1 554981 554985 AG_2 4
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hpat1 555016 555020 GT_2 4
hpat1 555026 555030 CT_2 4
hpat1 555032 555038 TG_3 6
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hpat1 555076 555080 CA_2 4
hpat1 555113 555117 TG_2 4
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hpat1 555168 555174 TGA_2 6
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hpat1 555236 555244 GAAG_2 8
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hpat1 555391 555395 CT_2 4
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hpat1 555458 555462 AT_2 4
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hpat1 555479 555483 CT_2 4
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hpat1 555498 555502 CA_2 4
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hpat1 555538 555546 TATT_2 8
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hpat1 555795 555799 GC_2 4
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hpat1 555824 555834 GCCTG_2 10
hpat1 555841 555847 AT_3 6
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hpat1 555898 555902 GA_2 4
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hpat1 555970 555974 GA_2 4
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hpat1 556098 556102 TG_2 4
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hpat1 556150 556154 AT_2 4
hpat1 556167 556171 CT_2 4
hpat1 556181 556185 AT_2 4
hpat1 556191 556195 GA_2 4
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hpat1 556316 556320 AG_2 4
hpat1 556325 556329 CT_2 4
hpat1 556344 556348 GC_2 4
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hpat1 556506 556510 TC_2 4
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hpat1 556611 556615 TG_2 4
hpat1 556649 556653 AC_2 4
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hpat1 556770 556774 GA_2 4
hpat1 556802 556806 TC_2 4
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hpat1 556864 556868 CT_2 4
hpat1 556880 556886 GA_3 6
hpat1 556887 556893 TC_3 6
@@ -19527,257 +37239,505 @@
hpat1 556956 556960 AG_2 4
hpat1 556965 556969 CT_2 4
hpat1 556970 556974 TC_2 4
-hpat1 556977 557009 TAAA_8 32
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hpat1 557067 557071 AT_2 4
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hpat1 557101 557105 TG_2 4
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hpat1 557144 557148 AG_2 4
hpat1 557161 557167 ATG_2 6
hpat1 557177 557181 TC_2 4
hpat1 557201 557207 TCC_2 6
hpat1 557224 557230 CAG_2 6
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hpat1 557285 557295 ATAAA_2 10
hpat1 557302 557306 AT_2 4
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hpat1 557370 557376 TGA_2 6
hpat1 557382 557388 CTT_2 6
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hpat1 557476 557480 AT_2 4
hpat1 557503 557509 TGT_2 6
hpat1 557534 557540 CTT_2 6
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hpat1 557580 557584 AG_2 4
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hpat1 557920 557926 AGC_2 6
hpat1 557940 557944 GA_2 4
hpat1 557952 557962 GCCCC_2 10
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hpat1 557989 557993 TG_2 4
hpat1 557995 557999 TG_2 4
hpat1 558001 558007 AGG_2 6
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hpat1 558172 558176 TG_2 4
hpat1 558193 558197 CG_2 4
hpat1 558208 558212 TC_2 4
hpat1 558213 558217 GC_2 4
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hpat1 558602 558608 CAG_2 6
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hpat1 558879 558887 AGCA_2 8
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hpat1 558929 558935 CAG_2 6
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hpat1 559865 559869 CT_2 4
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hpat1 560001 560007 GTT_2 6
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hpat1 560203 560207 CA_2 4
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hpat1 560424 560430 AG_3 6
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hpat1 560706 560714 CTGG_2 8
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hpat1 560840 560846 AGG_2 6
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hpat1 560921 560927 AGG_2 6
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hpat1 561014 561018 CA_2 4
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hpat1 561278 561286 CAAA_2 8
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hpat1 561403 561407 TA_2 4
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hpat1 561924 561928 GA_2 4
hpat1 561929 561933 AC_2 4
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hpat1 562134 562138 AG_2 4
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hpat1 562171 562175 TG_2 4
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hpat1 562192 562196 TA_2 4
hpat1 562209 562213 CT_2 4
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hpat1 562274 562278 TC_2 4
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hpat1 562316 562320 AC_2 4
+hpat1 562324 562328 AG_2 4
+hpat1 562354 562358 AA_2 4
hpat1 562360 562364 TG_2 4
+hpat1 562369 562373 TT_2 4
hpat1 562374 562378 AC_2 4
hpat1 562380 562384 CA_2 4
hpat1 562392 562396 TA_2 4
+hpat1 562408 562416 TCAA_2 8
hpat1 562439 562443 TG_2 4
+hpat1 562478 562482 AA_2 4
+hpat1 562516 562522 AAT_2 6
hpat1 562523 562527 TA_2 4
+hpat1 562528 562532 AT_2 4
hpat1 562543 562547 AT_2 4
hpat1 562547 562551 TG_2 4
hpat1 562584 562588 AG_2 4
-hpat1 562676 562680 AT_2 4
+hpat1 562593 562597 CT_2 4
+hpat1 562601 562605 AG_2 4
+hpat1 562633 562637 GG_2 4
+hpat1 562641 562645 CA_2 4
+hpat1 562645 562649 AA_2 4
+hpat1 562657 562665 AAGA_2 8
+hpat1 562675 562679 TA_2 4
hpat1 562680 562692 CTGTAA_2 12
-hpat1 562706 562710 CT_2 4
-hpat1 562712 562720 CTTT_2 8
-hpat1 562720 562729 TAT_3 9
+hpat1 562696 562700 TT_2 4
+hpat1 562701 562705 TT_2 4
+hpat1 562705 562709 TC_2 4
+hpat1 562709 562717 TTTC_2 8
+hpat1 562717 562721 TT_2 4
+hpat1 562721 562730 ATT_3 9
+hpat1 562730 562734 TT_2 4
+hpat1 562735 562739 GA_2 4
hpat1 562744 562748 TC_2 4
hpat1 562755 562761 CA_3 6
hpat1 562765 562769 AG_2 4
+hpat1 562782 562786 TT_2 4
+hpat1 562809 562813 GG_2 4
hpat1 562822 562826 TC_2 4
+hpat1 562835 562841 CC_3 6
hpat1 562860 562864 CA_2 4
+hpat1 562866 562872 CCA_2 6
+hpat1 562883 562889 TT_3 6
+hpat1 562893 562899 TT_3 6
hpat1 562901 562905 AG_2 4
hpat1 562934 562938 TC_2 4
hpat1 562957 562961 AT_2 4
hpat1 562992 562996 AG_2 4
hpat1 562996 563000 GT_2 4
+hpat1 563027 563031 AA_2 4
+hpat1 563032 563036 TT_2 4
hpat1 563052 563056 TC_2 4
+hpat1 563061 563067 TT_3 6
+hpat1 563073 563077 TT_2 4
+hpat1 563079 563083 TT_2 4
+hpat1 563083 563087 CC_2 4
hpat1 563087 563095 TATT_2 8
hpat1 563113 563117 AG_2 4
hpat1 563124 563128 TC_2 4
+hpat1 563136 563140 AG_2 4
hpat1 563173 563177 GA_2 4
hpat1 563177 563181 GT_2 4
hpat1 563193 563201 ATAA_2 8
hpat1 563207 563211 GA_2 4
+hpat1 563232 563236 TT_2 4
+hpat1 563237 563241 CT_2 4
hpat1 563250 563254 GA_2 4
+hpat1 563272 563276 GG_2 4
hpat1 563285 563289 GT_2 4
hpat1 563292 563296 AG_2 4
+hpat1 563326 563330 CC_2 4
+hpat1 563330 563336 TTC_2 6
hpat1 563336 563340 TA_2 4
hpat1 563361 563365 AC_2 4
hpat1 563377 563381 TC_2 4
hpat1 563413 563417 CT_2 4
hpat1 563425 563429 AT_2 4
-hpat1 563442 563448 TG_3 6
+hpat1 563441 563447 GT_3 6
hpat1 563468 563476 GAAA_2 8
-hpat1 563496 563500 AC_2 4
+hpat1 563476 563480 AA_2 4
+hpat1 563480 563484 GG_2 4
+hpat1 563488 563492 CT_2 4
+hpat1 563495 563499 CA_2 4
hpat1 563500 563504 CT_2 4
hpat1 563505 563515 CTTCC_2 10
hpat1 563534 563540 TGG_2 6
hpat1 563550 563556 AGC_2 6
-hpat1 563581 563585 AC_2 4
-hpat1 563601 563607 CAA_2 6
+hpat1 563566 563570 CA_2 4
+hpat1 563580 563584 CA_2 4
+hpat1 563599 563605 AAC_2 6
+hpat1 563605 563609 AA_2 4
+hpat1 563664 563668 CC_2 4
hpat1 563680 563688 GA_4 8
hpat1 563721 563725 AG_2 4
-hpat1 563734 563738 TA_2 4
+hpat1 563733 563737 AT_2 4
hpat1 563755 563759 TG_2 4
+hpat1 563767 563771 CT_2 4
+hpat1 563820 563824 TT_2 4
hpat1 563824 563828 GA_2 4
hpat1 563856 563860 TC_2 4
+hpat1 563864 563868 AA_2 4
+hpat1 563872 563876 AA_2 4
hpat1 563899 563903 TG_2 4
hpat1 563922 563928 AGG_2 6
+hpat1 563937 563941 GA_2 4
hpat1 563961 563965 AG_2 4
hpat1 563978 563982 GA_2 4
+hpat1 563983 563987 TG_2 4
hpat1 564011 564015 AG_2 4
hpat1 564020 564024 CT_2 4
hpat1 564025 564029 TC_2 4
+hpat1 564029 564045 AA_8 16
hpat1 564046 564056 GAAAG_2 10
-hpat1 564059 564063 TA_2 4
+hpat1 564058 564062 AT_2 4
hpat1 564071 564075 GT_2 4
hpat1 564081 564085 AC_2 4
+hpat1 564087 564091 GT_2 4
+hpat1 564098 564104 AA_3 6
hpat1 564117 564121 GT_2 4
+hpat1 564129 564133 GG_2 4
hpat1 564149 564153 AG_2 4
hpat1 564201 564209 GT_4 8
hpat1 564227 564231 AC_2 4
+hpat1 564235 564239 GG_2 4
+hpat1 564255 564259 GG_2 4
+hpat1 564259 564263 AA_2 4
+hpat1 564266 564270 AA_2 4
hpat1 564274 564278 AC_2 4
+hpat1 564301 564305 TC_2 4
hpat1 564325 564333 TATT_2 8
-hpat1 564338 564342 TG_2 4
+hpat1 564337 564341 GT_2 4
hpat1 564346 564350 GA_2 4
+hpat1 564367 564371 TT_2 4
hpat1 564371 564380 ATT_3 9
hpat1 564381 564390 TAT_3 9
-hpat1 564529 564533 CT_2 4
+hpat1 564398 564408 CCCAG_2 10
+hpat1 564438 564442 TT_2 4
+hpat1 564451 564455 TT_2 4
+hpat1 564528 564532 TC_2 4
+hpat1 564532 564536 TT_2 4
hpat1 564550 564554 TC_2 4
+hpat1 564568 564572 GG_2 4
hpat1 564597 564601 CT_2 4
+hpat1 564601 564605 TT_2 4
hpat1 564617 564621 TG_2 4
-hpat1 564627 564631 CT_2 4
+hpat1 564622 564626 TT_2 4
+hpat1 564626 564630 TC_2 4
+hpat1 564657 564661 AA_2 4
hpat1 564661 564665 GT_2 4
+hpat1 564668 564672 AA_2 4
hpat1 564675 564679 CT_2 4
hpat1 564691 564695 AG_2 4
hpat1 564702 564706 AC_2 4
@@ -19786,108 +37746,216 @@
hpat1 564726 564758 AC_16 32
hpat1 564761 564765 TG_2 4
hpat1 564775 564781 CAT_2 6
+hpat1 564788 564794 AAG_2 6
hpat1 564794 564798 AT_2 4
hpat1 564842 564846 AG_2 4
+hpat1 564848 564854 AAC_2 6
+hpat1 564858 564862 TT_2 4
+hpat1 564863 564867 TT_2 4
+hpat1 564869 564873 TT_2 4
+hpat1 564874 564878 TT_2 4
+hpat1 564879 564883 AA_2 4
+hpat1 564884 564890 TT_3 6
+hpat1 564891 564895 AA_2 4
+hpat1 564896 564900 TA_2 4
hpat1 564919 564923 TG_2 4
hpat1 564923 564927 CA_2 4
hpat1 564944 564948 AT_2 4
hpat1 564949 564953 TA_2 4
hpat1 564955 564959 TG_2 4
-hpat1 564968 564972 TG_2 4
+hpat1 564967 564971 GT_2 4
hpat1 565003 565007 TA_2 4
hpat1 565020 565028 TCCC_2 8
hpat1 565028 565034 TCC_2 6
+hpat1 565039 565043 CC_2 4
hpat1 565043 565049 ACA_2 6
-hpat1 565057 565063 TG_3 6
+hpat1 565051 565055 CC_2 4
+hpat1 565056 565062 GT_3 6
+hpat1 565068 565072 CC_2 4
hpat1 565076 565080 TG_2 4
hpat1 565085 565089 GT_2 4
hpat1 565089 565093 TC_2 4
hpat1 565112 565120 TGAG_2 8
+hpat1 565128 565132 GT_2 4
+hpat1 565136 565142 TT_3 6
hpat1 565161 565165 GA_2 4
hpat1 565165 565171 ATG_2 6
hpat1 565190 565194 TC_2 4
-hpat1 565209 565213 CA_2 4
-hpat1 565246 565250 TA_2 4
-hpat1 565250 565254 TG_2 4
+hpat1 565208 565212 AC_2 4
+hpat1 565216 565222 TT_3 6
+hpat1 565243 565247 GT_2 4
+hpat1 565247 565251 AT_2 4
+hpat1 565255 565259 CA_2 4
+hpat1 565259 565263 TT_2 4
+hpat1 565280 565286 ATG_2 6
+hpat1 565317 565321 TG_2 4
hpat1 565325 565329 GC_2 4
-hpat1 565342 565354 CATGTG_2 12
-hpat1 565361 565367 AGC_2 6
+hpat1 565337 565345 ACAT_2 8
+hpat1 565350 565354 TG_2 4
+hpat1 565358 565362 TA_2 4
+hpat1 565362 565368 GCA_2 6
+hpat1 565373 565377 TA_2 4
hpat1 565387 565393 TA_3 6
-hpat1 565454 565458 AC_2 4
+hpat1 565425 565437 TTCTAG_2 12
+hpat1 565453 565457 CA_2 4
+hpat1 565465 565469 CA_2 4
+hpat1 565491 565497 CCA_2 6
hpat1 565500 565504 GT_2 4
-hpat1 565528 565532 TC_2 4
+hpat1 565504 565508 AA_2 4
+hpat1 565517 565521 TC_2 4
+hpat1 565521 565525 CA_2 4
+hpat1 565527 565533 CT_3 6
hpat1 565539 565545 TGT_2 6
-hpat1 565579 565583 TG_2 4
+hpat1 565553 565557 TT_2 4
+hpat1 565578 565582 GT_2 4
+hpat1 565582 565586 GA_2 4
hpat1 565591 565595 TC_2 4
-hpat1 565617 565621 CT_2 4
+hpat1 565597 565601 TG_2 4
+hpat1 565602 565606 TT_2 4
+hpat1 565616 565620 TC_2 4
hpat1 565630 565639 TGA_3 9
+hpat1 565642 565648 TT_3 6
hpat1 565649 565653 AT_2 4
hpat1 565673 565679 TCT_2 6
hpat1 565682 565686 GA_2 4
hpat1 565687 565691 GT_2 4
hpat1 565697 565701 AT_2 4
-hpat1 565726 565734 GTTT_2 8
+hpat1 565712 565718 TTG_2 6
+hpat1 565720 565724 GG_2 4
+hpat1 565724 565732 TTGT_2 8
+hpat1 565732 565738 TT_3 6
+hpat1 565746 565754 TTTG_2 8
hpat1 565773 565777 AT_2 4
+hpat1 565804 565808 AA_2 4
+hpat1 565809 565813 TT_2 4
hpat1 565839 565843 CT_2 4
+hpat1 565855 565859 TT_2 4
hpat1 565861 565865 TG_2 4
hpat1 565871 565875 CT_2 4
+hpat1 565902 565906 TT_2 4
+hpat1 565909 565913 TT_2 4
+hpat1 565924 565928 TT_2 4
hpat1 565929 565933 GT_2 4
+hpat1 565985 565989 TT_2 4
+hpat1 565998 566002 TT_2 4
+hpat1 566007 566011 TT_2 4
+hpat1 566049 566053 TT_2 4
+hpat1 566061 566065 GT_2 4
+hpat1 566065 566073 AAGG_2 8
hpat1 566094 566098 AT_2 4
+hpat1 566108 566112 TT_2 4
+hpat1 566144 566148 CC_2 4
+hpat1 566156 566160 TT_2 4
+hpat1 566191 566195 CC_2 4
+hpat1 566196 566200 TT_2 4
hpat1 566204 566212 ACTA_2 8
-hpat1 566242 566246 CT_2 4
+hpat1 566241 566245 TC_2 4
+hpat1 566258 566262 TC_2 4
+hpat1 566268 566272 AA_2 4
+hpat1 566272 566278 GGA_2 6
hpat1 566280 566286 ATA_2 6
hpat1 566288 566292 TA_2 4
hpat1 566307 566313 TAA_2 6
hpat1 566327 566331 TG_2 4
hpat1 566374 566380 TGG_2 6
hpat1 566386 566392 TGA_2 6
+hpat1 566396 566400 TG_2 4
hpat1 566409 566413 GA_2 4
+hpat1 566428 566432 GA_2 4
hpat1 566437 566441 AG_2 4
hpat1 566442 566448 TGG_2 6
+hpat1 566486 566490 GT_2 4
hpat1 566497 566501 CT_2 4
+hpat1 566503 566507 GA_2 4
hpat1 566532 566536 TG_2 4
+hpat1 566537 566541 AA_2 4
+hpat1 566567 566571 TT_2 4
hpat1 566571 566583 AGGAGA_2 12
hpat1 566604 566608 AG_2 4
hpat1 566616 566620 GA_2 4
+hpat1 566630 566634 CT_2 4
+hpat1 566646 566650 TT_2 4
+hpat1 566652 566656 CT_2 4
hpat1 566667 566671 GT_2 4
+hpat1 566675 566679 AT_2 4
hpat1 566690 566696 TGT_2 6
hpat1 566696 566700 TA_2 4
hpat1 566703 566709 ATT_2 6
hpat1 566709 566713 GA_2 4
-hpat1 566787 566791 GA_2 4
+hpat1 566763 566767 AT_2 4
+hpat1 566786 566792 AG_3 6
hpat1 566798 566802 CA_2 4
-hpat1 566806 566812 ATC_2 6
-hpat1 566823 566827 CA_2 4
+hpat1 566804 566808 AT_2 4
+hpat1 566822 566826 AC_2 4
+hpat1 566826 566830 AG_2 4
+hpat1 566835 566839 AT_2 4
+hpat1 566843 566847 GG_2 4
+hpat1 566860 566864 TC_2 4
hpat1 566865 566871 ATG_2 6
hpat1 566880 566884 CA_2 4
hpat1 566893 566897 TA_2 4
+hpat1 566899 566903 AA_2 4
hpat1 566905 566909 TC_2 4
-hpat1 566923 566929 TA_3 6
-hpat1 567001 567009 CAAA_2 8
+hpat1 566914 566918 CC_2 4
+hpat1 566922 566928 AT_3 6
+hpat1 566928 566932 AC_2 4
+hpat1 566935 566939 AT_2 4
+hpat1 566942 566946 CC_2 4
+hpat1 566946 566950 AA_2 4
+hpat1 566953 566957 AA_2 4
+hpat1 566965 566969 TT_2 4
+hpat1 566970 566976 AA_3 6
+hpat1 566978 566982 CC_2 4
+hpat1 566982 566992 CAAAA_2 10
+hpat1 566999 567007 AACA_2 8
+hpat1 567012 567016 AA_2 4
hpat1 567026 567030 AG_2 4
hpat1 567059 567063 AC_2 4
hpat1 567081 567087 CA_3 6
hpat1 567087 567095 TCAT_2 8
hpat1 567100 567104 TA_2 4
+hpat1 567121 567125 TT_2 4
hpat1 567127 567133 AT_3 6
-hpat1 567224 567230 ATC_2 6
+hpat1 567141 567145 AC_2 4
+hpat1 567145 567151 CAA_2 6
+hpat1 567151 567159 TTCA_2 8
+hpat1 567169 567177 TTCA_2 8
+hpat1 567184 567188 AA_2 4
+hpat1 567201 567209 TCAC_2 8
+hpat1 567223 567232 CAT_3 9
+hpat1 567236 567242 TCA_2 6
hpat1 567264 567270 ATC_2 6
hpat1 567275 567279 TA_2 4
+hpat1 567287 567293 TCA_2 6
hpat1 567302 567306 AT_2 4
hpat1 567310 567314 AC_2 4
hpat1 567319 567327 CAGC_2 8
-hpat1 567378 567384 ATC_2 6
+hpat1 567333 567339 AGC_2 6
+hpat1 567339 567345 CAT_2 6
+hpat1 567377 567383 CAT_2 6
+hpat1 567401 567409 TTAG_2 8
hpat1 567418 567424 TC_3 6
+hpat1 567428 567436 ATTT_2 8
+hpat1 567452 567458 TTC_2 6
hpat1 567489 567501 ATCC_3 12
hpat1 567501 567507 ATT_2 6
hpat1 567507 567515 TCAT_2 8
hpat1 567523 567531 CACC_2 8
+hpat1 567532 567536 TT_2 4
+hpat1 567547 567551 AT_2 4
+hpat1 567557 567561 AA_2 4
+hpat1 567565 567571 TTC_2 6
+hpat1 567573 567579 TTC_2 6
+hpat1 567609 567615 CCA_2 6
hpat1 567620 567624 CT_2 4
hpat1 567624 567630 TCC_2 6
+hpat1 567634 567638 CT_2 4
+hpat1 567656 567664 TTCA_2 8
hpat1 567664 567668 CT_2 4
hpat1 567702 567711 ATC_3 9
+hpat1 567732 567738 ACC_2 6
hpat1 567740 567748 CTAT_2 8
-hpat1 567755 567761 CAT_2 6
+hpat1 567754 567760 TCA_2 6
hpat1 567768 567772 TA_2 4
hpat1 567783 567795 TCAT_3 12
hpat1 567811 567815 AT_2 4
@@ -19895,125 +37963,233 @@
hpat1 567837 567841 AG_2 4
hpat1 567874 567880 GTT_2 6
hpat1 567881 567885 AG_2 4
+hpat1 567892 567896 GA_2 4
hpat1 567899 567907 ATAA_2 8
hpat1 567917 567923 GCT_2 6
hpat1 567928 567932 AG_2 4
-hpat1 567964 567968 AC_2 4
-hpat1 567971 567977 AG_3 6
+hpat1 567950 567954 CC_2 4
+hpat1 567955 567959 GG_2 4
+hpat1 567963 567969 CA_3 6
+hpat1 567970 567976 GA_3 6
+hpat1 567978 567982 CA_2 4
hpat1 567984 567988 CT_2 4
+hpat1 567997 568001 GG_2 4
hpat1 568008 568012 CA_2 4
+hpat1 568013 568019 AGG_2 6
hpat1 568039 568043 TC_2 4
hpat1 568043 568049 GAA_2 6
hpat1 568091 568095 GA_2 4
hpat1 568096 568100 AG_2 4
hpat1 568100 568104 TC_2 4
hpat1 568105 568109 CT_2 4
-hpat1 568257 568261 AG_2 4
+hpat1 568112 568116 CC_2 4
+hpat1 568155 568159 CT_2 4
+hpat1 568179 568183 TC_2 4
+hpat1 568223 568229 CCA_2 6
+hpat1 568240 568246 TT_3 6
+hpat1 568249 568253 TT_2 4
+hpat1 568253 568259 TAG_2 6
+hpat1 568263 568267 GG_2 4
+hpat1 568267 568271 TT_2 4
hpat1 568274 568278 GT_2 4
hpat1 568290 568294 TC_2 4
hpat1 568338 568342 GC_2 4
hpat1 568375 568383 GTGA_2 8
hpat1 568388 568392 TG_2 4
+hpat1 568406 568410 CC_2 4
+hpat1 568415 568419 TT_2 4
+hpat1 568422 568428 GG_3 6
+hpat1 568440 568444 AG_2 4
hpat1 568454 568458 TG_2 4
+hpat1 568471 568475 AG_2 4
+hpat1 568475 568483 TTAA_2 8
hpat1 568489 568493 AG_2 4
hpat1 568506 568510 TC_2 4
-hpat1 568515 568525 TACTA_2 10
+hpat1 568514 568520 CTA_2 6
hpat1 568537 568543 CTT_2 6
-hpat1 568612 568618 CTG_2 6
-hpat1 568685 568689 AG_2 4
+hpat1 568586 568590 AA_2 4
+hpat1 568611 568617 GCT_2 6
+hpat1 568618 568622 TT_2 4
+hpat1 568639 568643 GG_2 4
+hpat1 568645 568649 GA_2 4
+hpat1 568650 568654 GG_2 4
+hpat1 568655 568659 TT_2 4
+hpat1 568673 568677 TC_2 4
+hpat1 568684 568688 GA_2 4
hpat1 568693 568699 CAG_2 6
-hpat1 568737 568743 AGG_2 6
-hpat1 568743 568747 AG_2 4
+hpat1 568702 568706 CC_2 4
+hpat1 568710 568714 AT_2 4
+hpat1 568730 568736 AAG_2 6
+hpat1 568736 568745 GAG_3 9
hpat1 568749 568753 AG_2 4
hpat1 568753 568757 CA_2 4
hpat1 568757 568767 GTGAG_2 10
hpat1 568767 568771 GA_2 4
+hpat1 568771 568775 AA_2 4
hpat1 568784 568788 CA_2 4
+hpat1 568790 568794 GG_2 4
hpat1 568812 568816 GT_2 4
hpat1 568819 568825 GA_3 6
+hpat1 568833 568839 GGA_2 6
+hpat1 568859 568863 GA_2 4
hpat1 568881 568885 TC_2 4
-hpat1 568906 568910 TG_2 4
+hpat1 568889 568897 AA_4 8
+hpat1 568905 568909 GT_2 4
hpat1 568916 568920 TG_2 4
hpat1 568940 568946 AGG_2 6
+hpat1 568948 568952 CC_2 4
+hpat1 568970 568978 GGCT_2 8
+hpat1 568998 569002 CT_2 4
hpat1 569021 569025 AG_2 4
-hpat1 569048 569058 TAATA_2 10
+hpat1 569029 569033 CC_2 4
+hpat1 569039 569043 AA_2 4
+hpat1 569046 569052 AAT_2 6
+hpat1 569052 569061 ATA_3 9
+hpat1 569061 569067 AA_3 6
+hpat1 569067 569071 CC_2 4
+hpat1 569073 569079 CTA_2 6
+hpat1 569079 569083 TT_2 4
hpat1 569102 569110 TAAT_2 8
-hpat1 569176 569184 TGGG_2 8
+hpat1 569110 569116 AAT_2 6
+hpat1 569174 569182 GGTG_2 8
hpat1 569204 569208 GA_2 4
hpat1 569234 569238 TC_2 4
+hpat1 569242 569246 AA_2 4
+hpat1 569246 569250 AT_2 4
hpat1 569271 569275 AC_2 4
+hpat1 569312 569316 GA_2 4
hpat1 569329 569335 AGG_2 6
hpat1 569353 569357 GA_2 4
hpat1 569386 569390 AG_2 4
hpat1 569391 569395 GA_2 4
-hpat1 569415 569421 TAA_2 6
+hpat1 569404 569408 AA_2 4
+hpat1 569410 569414 AA_2 4
+hpat1 569414 569423 ATA_3 9
hpat1 569424 569430 TGT_2 6
+hpat1 569432 569436 AT_2 4
hpat1 569439 569445 AGC_2 6
+hpat1 569449 569453 TT_2 4
hpat1 569459 569463 CA_2 4
hpat1 569479 569483 GT_2 4
hpat1 569485 569489 TA_2 4
+hpat1 569491 569495 TT_2 4
hpat1 569500 569506 CAT_2 6
+hpat1 569510 569514 TT_2 4
hpat1 569526 569532 CAG_2 6
+hpat1 569532 569536 CC_2 4
+hpat1 569536 569542 AAG_2 6
+hpat1 569545 569551 TTA_2 6
hpat1 569551 569555 CT_2 4
+hpat1 569558 569562 CC_2 4
+hpat1 569563 569567 TT_2 4
hpat1 569590 569594 GA_2 4
+hpat1 569612 569616 AT_2 4
hpat1 569620 569626 TG_3 6
hpat1 569650 569656 CTC_2 6
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hpat1 569795 569801 AT_3 6
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hpat1 569823 569827 CT_2 4
hpat1 569838 569842 CT_2 4
hpat1 569855 569861 TAG_2 6
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hpat1 569989 569993 TA_2 4
hpat1 570010 570014 AC_2 4
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hpat1 570043 570047 GA_2 4
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hpat1 570233 570237 AT_2 4
hpat1 570249 570253 TC_2 4
hpat1 570359 570363 AT_2 4
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hpat1 570414 570418 TG_2 4
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hpat1 570520 570524 AG_2 4
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hpat1 570542 570557 TAA_5 15
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hpat1 570602 570606 CT_2 4
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hpat1 570639 570643 TC_2 4
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hpat1 570894 570898 TC_2 4
hpat1 570908 570912 GA_2 4
hpat1 570912 570918 AGA_2 6
hpat1 570925 570929 AC_2 4
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hpat1 570944 570948 TG_2 4
hpat1 570962 570966 CA_2 4
hpat1 570967 570973 ATC_2 6
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hpat1 571109 571113 AG_2 4
hpat1 571123 571127 AG_2 4
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hpat1 571141 571147 GAC_2 6
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hpat1 571190 571198 AG_4 8
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hpat1 571252 571258 GT_3 6
hpat1 571258 571262 AT_2 4
hpat1 571262 571268 GT_3 6
@@ -20026,229 +38202,424 @@
hpat1 571308 571314 AT_3 6
hpat1 571317 571333 TG_8 16
hpat1 571337 571341 TA_2 4
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hpat1 571358 571364 AGG_2 6
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hpat1 574001 574010 CAC_3 9
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hpat1 574657 574661 AG_2 4
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hpat1 575801 575813 ATTTTT_2 12
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hpat1 575898 575902 AT_2 4
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hpat1 576013 576021 GT_4 8
hpat1 576038 576046 TCCT_2 8
hpat1 576051 576059 AGGT_2 8
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hpat1 576094 576100 AT_3 6
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hpat1 576109 576115 GAA_2 6
hpat1 576126 576134 AGGG_2 8
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hpat1 576190 576194 GT_2 4
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hpat1 576215 576221 AG_3 6
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hpat1 576388 576394 GA_3 6
hpat1 576396 576400 TG_2 4
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hpat1 576432 576438 CTT_2 6
hpat1 576451 576455 AC_2 4
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hpat1 576493 576497 GT_2 4
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hpat1 576562 576566 GT_2 4
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hpat1 576581 576587 ATA_2 6
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hpat1 576723 576727 AG_2 4
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hpat1 576760 576766 TC_3 6
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hpat1 576865 576869 TG_2 4
hpat1 576874 576878 AG_2 4
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hpat1 576915 576919 TG_2 4
hpat1 576929 576935 AG_3 6
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hpat1 576970 576976 CAG_2 6
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hpat1 577046 577056 AGGGA_2 10
hpat1 577064 577068 AG_2 4
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hpat1 577106 577110 CT_2 4
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hpat1 577146 577156 TC_5 10
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hpat1 577176 577180 CA_2 4
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hpat1 577227 577231 GA_2 4
hpat1 577232 577236 AG_2 4
hpat1 577236 577240 TC_2 4
@@ -20256,514 +38627,948 @@
hpat1 577246 577250 TC_2 4
hpat1 577268 577272 CA_2 4
hpat1 577273 577277 TC_2 4
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hpat1 577355 577361 CAC_2 6
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hpat1 577385 577391 GTA_2 6
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hpat1 577497 577501 AC_2 4
hpat1 577503 577509 AG_3 6
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hpat1 577715 577719 AG_2 4
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hpat1 577779 577785 CT_3 6
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hpat1 577850 577856 CTC_2 6
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hpat1 577972 577976 CA_2 4
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hpat1 578057 578063 CAA_2 6
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hpat1 578233 578239 ATA_2 6
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hpat1 578421 578429 ACGG_2 8
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hpat1 578900 578904 GT_2 4
hpat1 578904 578910 AGT_2 6
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hpat1 579477 579489 AG_6 12
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hpat1 579529 579535 AGT_2 6
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hpat1 580003 580009 AGA_2 6
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hpat1 580034 580040 AGA_2 6
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hpat1 580990 580994 GA_2 4
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hpat1 581489 581497 AG_4 8
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hpat1 582104 582108 GA_2 4
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hpat1 582121 582139 CAAAAA_3 18
hpat1 582139 582154 CAAAA_3 15
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hpat1 583515 583519 AT_2 4
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hpat1 583540 583556 TGTA_4 16
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-hpat1 590722 590726 AC_2 4
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hpat1 590749 590753 TA_2 4
+hpat1 590754 590760 TT_3 6
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hpat1 590770 590776 CTT_2 6
hpat1 590780 590784 AT_2 4
-hpat1 590809 590813 TA_2 4
+hpat1 590796 590804 AA_4 8
+hpat1 590808 590814 AT_3 6
hpat1 590822 590828 ATA_2 6
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hpat1 590832 590836 AC_2 4
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hpat1 590848 590852 CA_2 4
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hpat1 590863 590869 TCC_2 6
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hpat1 590971 590975 TG_2 4
hpat1 590975 590979 CT_2 4
hpat1 590988 590992 TC_2 4
-hpat1 591005 591009 CT_2 4
+hpat1 591004 591008 TC_2 4
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hpat1 591065 591069 TC_2 4
hpat1 591086 591092 TC_3 6
hpat1 591097 591101 TC_2 4
hpat1 591117 591121 TC_2 4
+hpat1 591135 591139 AA_2 4
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hpat1 591150 591154 CT_2 4
hpat1 591176 591182 CT_3 6
+hpat1 591219 591225 GCC_2 6
+hpat1 591260 591266 GGC_2 6
+hpat1 591292 591296 GG_2 4
hpat1 591299 591303 TC_2 4
hpat1 591309 591313 CT_2 4
hpat1 591313 591317 TC_2 4
@@ -20771,25 +39576,50 @@
hpat1 591336 591340 AC_2 4
hpat1 591365 591371 AG_3 6
hpat1 591373 591377 CA_2 4
+hpat1 591389 591393 CC_2 4
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hpat1 591429 591433 AG_2 4
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hpat1 591472 591478 TGT_2 6
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hpat1 591510 591514 GT_2 4
hpat1 591535 591541 TCA_2 6
hpat1 591556 591562 GAT_2 6
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hpat1 591592 591596 AG_2 4
hpat1 591617 591621 CT_2 4
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+hpat1 591654 591658 GG_2 4
hpat1 591661 591669 ATCC_2 8
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hpat1 591695 591699 CT_2 4
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hpat1 591797 591801 CT_2 4
+hpat1 591802 591808 GGA_2 6
hpat1 591814 591818 GA_2 4
hpat1 591827 591837 AGGGG_2 10
-hpat1 591874 591878 TC_2 4
+hpat1 591842 591846 AT_2 4
+hpat1 591860 591864 AA_2 4
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hpat1 591883 591887 CT_2 4
hpat1 591896 591908 CAGGGA_2 12
hpat1 591910 591916 GCC_2 6
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+hpat1 591946 591950 GA_2 4
hpat1 591961 591967 AGA_2 6
+hpat1 592000 592006 TTC_2 6
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hpat1 592042 592046 TC_2 4
hpat1 592060 592064 TG_2 4
hpat1 592072 592076 TG_2 4
@@ -20797,221 +39627,427 @@
hpat1 592087 592091 GT_2 4
hpat1 592095 592101 AGA_2 6
hpat1 592119 592125 TGG_2 6
+hpat1 592147 592151 TT_2 4
hpat1 592160 592168 AGGC_2 8
hpat1 592191 592195 GA_2 4
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hpat1 592223 592227 TC_2 4
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hpat1 592259 592267 TGGC_2 8
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hpat1 592343 592347 GA_2 4
hpat1 592376 592380 AG_2 4
hpat1 592381 592385 GA_2 4
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hpat1 592429 592437 GTTT_2 8
hpat1 592501 592505 GA_2 4
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hpat1 592570 592574 TC_2 4
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hpat1 592621 592627 CA_3 6
hpat1 592650 592654 CA_2 4
hpat1 592654 592658 GT_2 4
hpat1 592694 592703 TAT_3 9
hpat1 592706 592712 CAT_2 6
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hpat1 592750 592754 TA_2 4
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hpat1 592764 592768 AG_2 4
hpat1 592776 592782 GAT_2 6
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hpat1 592825 592829 AG_2 4
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hpat1 593009 593013 CT_2 4
-hpat1 593053 593061 GCCA_2 8
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hpat1 593112 593116 TC_2 4
hpat1 593126 593130 AG_2 4
hpat1 593130 593134 GA_2 4
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hpat1 593144 593148 GA_2 4
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hpat1 593232 593236 TG_2 4
hpat1 593239 593243 TG_2 4
hpat1 593253 593257 GA_2 4
hpat1 593262 593266 AG_2 4
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hpat1 593279 593287 TGCT_2 8
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hpat1 593297 593301 AC_2 4
-hpat1 593349 593357 AGGC_2 8
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hpat1 593381 593389 ACTG_2 8
hpat1 593389 593393 TG_2 4
hpat1 593393 593397 TC_2 4
hpat1 593398 593402 GC_2 4
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hpat1 593439 593443 GC_2 4
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hpat1 593495 593499 CA_2 4
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hpat1 593526 593532 CTG_2 6
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hpat1 593606 593610 CT_2 4
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hpat1 593689 593693 GA_2 4
hpat1 593693 593697 CA_2 4
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hpat1 593741 593745 CT_2 4
hpat1 593745 593749 GA_2 4
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hpat1 593793 593805 TCATCT_2 12
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hpat1 593844 593850 TGG_2 6
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hpat1 593970 593974 GA_2 4
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hpat1 593988 593998 TCCCA_2 10
-hpat1 594028 594038 CAGCC_2 10
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hpat1 594067 594073 AGC_2 6
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hpat1 594090 594094 CA_2 4
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hpat1 594142 594146 GT_2 4
hpat1 594162 594166 AT_2 4
hpat1 594167 594173 TGA_2 6
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hpat1 594205 594209 AG_2 4
hpat1 594249 594253 TG_2 4
hpat1 594262 594268 CAG_2 6
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hpat1 594328 594334 CT_3 6
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hpat1 594364 594370 GCT_2 6
hpat1 594379 594385 GTT_2 6
hpat1 594392 594398 CTT_2 6
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hpat1 594427 594431 CA_2 4
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hpat1 594549 594553 AC_2 4
hpat1 594566 594570 CA_2 4
hpat1 594574 594582 CTCC_2 8
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hpat1 594635 594639 CT_2 4
hpat1 594640 594644 AG_2 4
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hpat1 594688 594692 CT_2 4
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hpat1 594725 594729 TC_2 4
hpat1 594732 594736 CT_2 4
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hpat1 594808 594812 GC_2 4
hpat1 594834 594838 TG_2 4
hpat1 594852 594856 TC_2 4
hpat1 594870 594876 TCA_2 6
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hpat1 594937 594941 TG_2 4
hpat1 594943 594947 GC_2 4
hpat1 594952 594956 CA_2 4
-hpat1 595015 595023 AGGA_2 8
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hpat1 595031 595035 CA_2 4
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hpat1 595051 595055 AT_2 4
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hpat1 595085 595089 CT_2 4
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hpat1 595227 595231 AG_2 4
hpat1 595231 595235 GC_2 4
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hpat1 595276 595282 GCA_2 6
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hpat1 595295 595299 GC_2 4
hpat1 595328 595332 GC_2 4
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hpat1 595348 595360 CGG_4 12
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hpat1 595447 595451 GC_2 4
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hpat1 595477 595481 TC_2 4
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hpat1 595526 595530 GC_2 4
hpat1 595531 595535 GC_2 4
hpat1 595545 595549 GT_2 4
hpat1 595554 595558 CT_2 4
hpat1 595566 595578 TCCCGC_2 12
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hpat1 595601 595613 CAC_4 12
-hpat1 595620 595624 GC_2 4
-hpat1 595624 595636 CGC_4 12
-hpat1 595642 595648 GCC_2 6
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hpat1 595691 595697 GCA_2 6
hpat1 595715 595719 CG_2 4
hpat1 595722 595726 CT_2 4
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hpat1 595751 595757 CAG_2 6
hpat1 595780 595786 GC_3 6
hpat1 595795 595801 GCA_2 6
hpat1 595801 595805 GC_2 4
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hpat1 595837 595841 GC_2 4
hpat1 595841 595845 CG_2 4
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hpat1 595871 595875 GC_2 4
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hpat1 595918 595926 GAGG_2 8
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hpat1 596158 596162 TC_2 4
hpat1 596170 596176 ACC_2 6
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hpat1 596183 596187 CG_2 4
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hpat1 596245 596249 AG_2 4
hpat1 596258 596262 GT_2 4
hpat1 596262 596270 CTGC_2 8
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hpat1 596342 596346 AG_2 4
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hpat1 596426 596435 GTG_3 9
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hpat1 596461 596465 TA_2 4
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hpat1 596538 596548 CAAAA_2 10
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hpat1 596555 596559 AC_2 4
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hpat1 596566 596572 AGT_2 6
hpat1 596572 596580 TCGT_2 8
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hpat1 596585 596591 CAA_2 6
hpat1 596591 596595 AT_2 4
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hpat1 596724 596730 TA_3 6
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hpat1 596781 596787 AG_3 6
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hpat1 596864 596873 ACC_3 9
hpat1 596880 596890 CA_5 10
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hpat1 596961 596965 AG_2 4
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hpat1 596994 596998 TC_2 4
hpat1 597000 597004 TC_2 4
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hpat1 597023 597029 CT_3 6
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hpat1 597094 597102 CAGA_2 8
hpat1 597102 597106 GC_2 4
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hpat1 597143 597149 CTC_2 6
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hpat1 597180 597184 CT_2 4
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hpat1 597375 597381 AGG_2 6
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hpat1 597385 597393 CAGC_2 8
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hpat1 597494 597498 GC_2 4
hpat1 597498 597504 CTC_2 6
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hpat1 597519 597529 TCACT_2 10
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hpat1 597686 597694 TCAT_2 8
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hpat1 597719 597723 AC_2 4
hpat1 597739 597745 AGA_2 6
hpat1 597750 597758 ATGA_2 8
hpat1 597762 597766 GA_2 4
hpat1 597782 597786 GA_2 4
+hpat1 597786 597790 GG_2 4
hpat1 597823 597827 TG_2 4
hpat1 597853 597859 AG_3 6
hpat1 597882 597888 GCT_2 6
hpat1 597892 597896 AG_2 4
hpat1 597896 597900 TC_2 4
hpat1 597909 597913 CT_2 4
+hpat1 597914 597918 AA_2 4
hpat1 597919 597923 GA_2 4
hpat1 597923 597929 TAA_2 6
+hpat1 597968 597972 TG_2 4
hpat1 597977 597981 AG_2 4
hpat1 597991 597997 CA_3 6
hpat1 598013 598017 GA_2 4
+hpat1 598023 598027 TG_2 4
+hpat1 598033 598037 TT_2 4
+hpat1 598039 598043 GG_2 4
+hpat1 598047 598051 CC_2 4
hpat1 598075 598081 AGC_2 6
+hpat1 598087 598091 TT_2 4
+hpat1 598117 598121 GG_2 4
+hpat1 598129 598133 CA_2 4
+hpat1 598134 598138 TC_2 4
hpat1 598147 598151 AC_2 4
-hpat1 598174 598178 CT_2 4
+hpat1 598152 598156 GG_2 4
+hpat1 598166 598170 CC_2 4
+hpat1 598173 598177 TC_2 4
hpat1 598186 598190 CT_2 4
-hpat1 598199 598203 AC_2 4
+hpat1 598198 598202 CA_2 4
+hpat1 598209 598213 CC_2 4
hpat1 598230 598236 CTT_2 6
+hpat1 598241 598247 CC_3 6
+hpat1 598250 598254 CC_2 4
hpat1 598260 598264 TC_2 4
hpat1 598308 598312 TC_2 4
hpat1 598328 598334 ACC_2 6
+hpat1 598353 598357 TC_2 4
+hpat1 598370 598374 CC_2 4
hpat1 598377 598381 CT_2 4
-hpat1 598434 598442 CATT_2 8
+hpat1 598387 598391 CC_2 4
+hpat1 598408 598412 TT_2 4
+hpat1 598412 598416 TA_2 4
+hpat1 598432 598444 TTCA_3 12
hpat1 598447 598455 ATTC_2 8
+hpat1 598460 598464 AT_2 4
hpat1 598481 598485 TG_2 4
hpat1 598490 598494 CA_2 4
hpat1 598513 598519 CAG_2 6
@@ -21021,64 +40057,99 @@
hpat1 598553 598557 TC_2 4
hpat1 598565 598569 AG_2 4
hpat1 598569 598573 TA_2 4
-hpat1 598595 598599 GT_2 4
+hpat1 598581 598585 GG_2 4
+hpat1 598594 598598 TG_2 4
+hpat1 598600 598604 TT_2 4
hpat1 598609 598613 TC_2 4
hpat1 598614 598622 CTTC_2 8
-hpat1 598626 598630 CA_2 4
+hpat1 598625 598629 AC_2 4
hpat1 598638 598646 AGGT_2 8
hpat1 598652 598658 ATT_2 6
+hpat1 598662 598666 TT_2 4
+hpat1 598690 598694 AG_2 4
hpat1 598716 598720 CA_2 4
hpat1 598731 598735 TG_2 4
hpat1 598741 598745 GA_2 4
+hpat1 598781 598785 CA_2 4
hpat1 598803 598807 AG_2 4
hpat1 598810 598814 TG_2 4
-hpat1 598841 598847 GAG_2 6
+hpat1 598840 598844 AG_2 4
+hpat1 598844 598848 GA_2 4
+hpat1 598851 598855 GT_2 4
hpat1 598855 598859 CA_2 4
hpat1 598863 598867 GA_2 4
hpat1 598871 598875 AG_2 4
+hpat1 598918 598922 AA_2 4
+hpat1 598932 598936 TC_2 4
hpat1 598936 598940 AG_2 4
-hpat1 598948 598952 TG_2 4
+hpat1 598944 598950 CTG_2 6
hpat1 598952 598956 CA_2 4
hpat1 598957 598961 CT_2 4
hpat1 598966 598970 TG_2 4
hpat1 598979 598987 TCCT_2 8
hpat1 598995 599001 TGC_2 6
+hpat1 599031 599035 CT_2 4
hpat1 599039 599043 GT_2 4
hpat1 599045 599049 AG_2 4
-hpat1 599107 599111 GT_2 4
+hpat1 599066 599070 CT_2 4
+hpat1 599077 599081 TT_2 4
+hpat1 599090 599096 TGC_2 6
+hpat1 599102 599108 TTG_2 6
hpat1 599111 599117 TCA_2 6
hpat1 599121 599125 AT_2 4
+hpat1 599131 599135 TT_2 4
+hpat1 599152 599156 TC_2 4
+hpat1 599165 599173 TCCC_2 8
hpat1 599193 599197 AT_2 4
hpat1 599216 599222 AT_3 6
hpat1 599222 599228 GT_3 6
+hpat1 599231 599235 TA_2 4
hpat1 599238 599242 TG_2 4
-hpat1 599256 599262 GT_3 6
+hpat1 599255 599263 TG_4 8
+hpat1 599267 599271 TT_2 4
hpat1 599276 599282 TA_3 6
hpat1 599302 599306 TG_2 4
+hpat1 599316 599320 TT_2 4
hpat1 599329 599333 AC_2 4
hpat1 599335 599339 CT_2 4
hpat1 599339 599343 GT_2 4
hpat1 599374 599380 CTG_2 6
-hpat1 599394 599398 TG_2 4
+hpat1 599393 599397 GT_2 4
hpat1 599399 599403 GT_2 4
+hpat1 599404 599410 CCA_2 6
+hpat1 599412 599418 CCT_2 6
hpat1 599435 599443 GATG_2 8
+hpat1 599466 599470 CC_2 4
hpat1 599479 599483 TG_2 4
hpat1 599494 599500 GT_3 6
hpat1 599502 599506 CT_2 4
hpat1 599517 599523 GT_3 6
-hpat1 599527 599531 CT_2 4
+hpat1 599526 599530 TC_2 4
hpat1 599538 599542 AC_2 4
-hpat1 599566 599570 AG_2 4
-hpat1 599572 599580 TACA_2 8
+hpat1 599544 599548 GG_2 4
+hpat1 599559 599563 GG_2 4
+hpat1 599565 599571 GA_3 6
+hpat1 599571 599579 ATAC_2 8
hpat1 599589 599593 CT_2 4
-hpat1 599620 599626 AGC_2 6
-hpat1 599696 599700 AT_2 4
+hpat1 599619 599628 CAG_3 9
+hpat1 599645 599649 TC_2 4
+hpat1 599649 599653 CA_2 4
+hpat1 599693 599697 GA_2 4
+hpat1 599702 599708 GTT_2 6
hpat1 599713 599717 TC_2 4
-hpat1 599739 599743 TG_2 4
+hpat1 599719 599723 TG_2 4
+hpat1 599738 599742 GT_2 4
+hpat1 599746 599752 AAT_2 6
+hpat1 599758 599764 TTG_2 6
hpat1 599809 599813 GA_2 4
+hpat1 599830 599834 GA_2 4
+hpat1 599836 599840 CC_2 4
hpat1 599841 599845 TC_2 4
+hpat1 599850 599854 AA_2 4
+hpat1 599857 599861 AA_2 4
hpat1 599872 599881 GTG_3 9
hpat1 599902 599908 AGG_2 6
+hpat1 599917 599921 GA_2 4
hpat1 599941 599945 AG_2 4
hpat1 599958 599962 GA_2 4
hpat1 599963 599967 CG_2 4
@@ -21094,46 +40165,66 @@
hpat1 600081 600085 TG_2 4
hpat1 600085 600093 TA_4 8
hpat1 600095 600099 TA_2 4
-hpat1 600102 600106 GT_2 4
-hpat1 600106 600116 AT_5 10
+hpat1 600101 600105 TG_2 4
+hpat1 600105 600115 TA_5 10
hpat1 600117 600131 TA_7 14
-hpat1 600151 600159 TGAA_2 8
+hpat1 600139 600145 TTG_2 6
+hpat1 600149 600157 AATG_2 8
+hpat1 600157 600161 AA_2 4
hpat1 600168 600172 AC_2 4
-hpat1 600180 600184 AC_2 4
+hpat1 600179 600183 CA_2 4
hpat1 600220 600224 TA_2 4
hpat1 600224 600230 TG_3 6
-hpat1 600237 600243 GT_3 6
+hpat1 600236 600242 TG_3 6
hpat1 600243 600249 AG_3 6
-hpat1 600254 600258 TA_2 4
+hpat1 600253 600257 AT_2 4
hpat1 600286 600290 AG_2 4
-hpat1 600332 600336 GT_2 4
-hpat1 600352 600356 TA_2 4
+hpat1 600290 600294 AA_2 4
+hpat1 600331 600335 TG_2 4
+hpat1 600349 600353 GT_2 4
+hpat1 600353 600357 AT_2 4
hpat1 600358 600362 CA_2 4
hpat1 600376 600380 GA_2 4
-hpat1 600396 600402 CT_3 6
-hpat1 600429 600433 CT_2 4
+hpat1 600385 600389 AA_2 4
+hpat1 600395 600403 TC_4 8
+hpat1 600425 600431 GCT_2 6
+hpat1 600440 600444 CA_2 4
hpat1 600444 600448 GT_2 4
+hpat1 600485 600491 CCT_2 6
hpat1 600504 600510 GT_3 6
+hpat1 600518 600522 CC_2 4
hpat1 600543 600547 TG_2 4
+hpat1 600550 600554 AA_2 4
+hpat1 600556 600560 AT_2 4
hpat1 600576 600580 TG_2 4
-hpat1 600624 600628 CT_2 4
+hpat1 600623 600627 TC_2 4
hpat1 600639 600643 CT_2 4
+hpat1 600643 600647 GG_2 4
hpat1 600648 600654 CAG_2 6
+hpat1 600654 600660 CCA_2 6
hpat1 600670 600674 AC_2 4
hpat1 600684 600688 TG_2 4
hpat1 600688 600696 GA_4 8
hpat1 600729 600737 GCCA_2 8
hpat1 600737 600745 AGTG_2 8
+hpat1 600747 600753 CCT_2 6
hpat1 600757 600761 TG_2 4
hpat1 600788 600792 TG_2 4
-hpat1 600797 600803 GAA_2 6
+hpat1 600792 600796 AA_2 4
+hpat1 600796 600802 AGA_2 6
hpat1 600805 600811 ATA_2 6
+hpat1 600824 600830 AA_3 6
hpat1 600831 600837 ATA_2 6
+hpat1 600837 600843 AAT_2 6
+hpat1 600853 600857 GC_2 4
hpat1 600864 600868 CA_2 4
hpat1 600886 600890 CA_2 4
hpat1 600927 600931 GA_2 4
hpat1 600950 600954 GA_2 4
hpat1 600959 600963 TC_2 4
+hpat1 600964 600968 AA_2 4
+hpat1 600969 600977 AA_4 8
+hpat1 600979 600983 AA_2 4
hpat1 600998 601002 CT_2 4
hpat1 601012 601016 TG_2 4
hpat1 601026 601030 CT_2 4
@@ -21141,520 +40232,960 @@
hpat1 601090 601094 CA_2 4
hpat1 601118 601122 AG_2 4
hpat1 601132 601136 TC_2 4
-hpat1 601142 601146 CA_2 4
+hpat1 601137 601141 AA_2 4
+hpat1 601141 601145 AC_2 4
+hpat1 601145 601149 AA_2 4
hpat1 601157 601163 TGT_2 6
+hpat1 601180 601184 GT_2 4
+hpat1 601208 601212 AA_2 4
+hpat1 601223 601227 GG_2 4
hpat1 601234 601238 CT_2 4
-hpat1 601282 601286 CT_2 4
+hpat1 601245 601249 TT_2 4
+hpat1 601257 601265 CATA_2 8
+hpat1 601281 601285 TC_2 4
hpat1 601289 601293 AG_2 4
+hpat1 601294 601298 CA_2 4
+hpat1 601302 601306 CA_2 4
+hpat1 601335 601339 AA_2 4
+hpat1 601341 601345 GA_2 4
+hpat1 601346 601350 AG_2 4
hpat1 601353 601361 GAAG_2 8
+hpat1 601381 601385 AC_2 4
hpat1 601400 601404 CA_2 4
+hpat1 601444 601448 AA_2 4
hpat1 601458 601464 TA_3 6
+hpat1 601467 601471 TT_2 4
hpat1 601473 601481 AGGT_2 8
hpat1 601485 601491 GT_3 6
-hpat1 601566 601570 AT_2 4
+hpat1 601499 601503 AC_2 4
+hpat1 601521 601527 GAA_2 6
+hpat1 601529 601535 GAA_2 6
+hpat1 601544 601548 AA_2 4
+hpat1 601561 601565 GT_2 4
+hpat1 601565 601571 TA_3 6
+hpat1 601577 601581 GT_2 4
hpat1 601584 601588 CT_2 4
-hpat1 601592 601598 ATA_2 6
+hpat1 601589 601593 GA_2 4
+hpat1 601593 601599 TAA_2 6
hpat1 601602 601606 CA_2 4
hpat1 601618 601622 CA_2 4
+hpat1 601650 601654 TC_2 4
hpat1 601673 601679 TG_3 6
+hpat1 601700 601704 TT_2 4
hpat1 601738 601742 CA_2 4
hpat1 601747 601755 GCCT_2 8
-hpat1 601787 601795 TGTA_2 8
+hpat1 601761 601767 GTT_2 6
+hpat1 601786 601794 ATGT_2 8
+hpat1 601800 601804 TA_2 4
hpat1 601814 601818 CA_2 4
hpat1 601823 601827 TG_2 4
hpat1 601828 601834 TG_3 6
-hpat1 601849 601853 AT_2 4
+hpat1 601841 601845 TT_2 4
+hpat1 601848 601854 TA_3 6
+hpat1 601867 601883 TT_8 16
hpat1 601886 601890 AG_2 4
hpat1 601893 601897 CA_2 4
hpat1 601897 601903 ATT_2 6
+hpat1 601946 601950 CT_2 4
hpat1 601957 601963 AGG_2 6
-hpat1 602041 602045 AG_2 4
+hpat1 601965 601969 TC_2 4
+hpat1 602026 602030 TT_2 4
+hpat1 602033 602037 TT_2 4
+hpat1 602037 602043 TAG_2 6
hpat1 602054 602060 CAC_2 6
-hpat1 602148 602152 GC_2 4
-hpat1 602180 602184 CA_2 4
+hpat1 602104 602108 CT_2 4
+hpat1 602147 602151 CG_2 4
+hpat1 602157 602161 CA_2 4
+hpat1 602162 602166 GG_2 4
+hpat1 602166 602170 TT_2 4
+hpat1 602177 602181 TC_2 4
+hpat1 602215 602219 AA_2 4
+hpat1 602222 602228 TT_3 6
hpat1 602257 602261 AG_2 4
hpat1 602285 602289 AC_2 4
hpat1 602291 602295 CA_2 4
+hpat1 602311 602315 AT_2 4
hpat1 602323 602331 TGAG_2 8
+hpat1 602332 602340 TAAA_2 8
hpat1 602360 602364 AG_2 4
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+hpat1 602381 602391 GTTTT_2 10
hpat1 602404 602408 GA_2 4
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+hpat1 602433 602437 CT_2 4
+hpat1 602442 602446 GG_2 4
+hpat1 602499 602505 CAT_2 6
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+hpat1 602561 602569 TT_4 8
+hpat1 602569 602575 AA_3 6
hpat1 602579 602583 AG_2 4
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hpat1 602595 602599 AT_2 4
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hpat1 602617 602623 CAA_2 6
+hpat1 602637 602641 AG_2 4
+hpat1 602644 602648 GA_2 4
hpat1 602655 602661 CAA_2 6
+hpat1 602661 602665 AA_2 4
+hpat1 602667 602673 TTG_2 6
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+hpat1 602697 602701 TT_2 4
+hpat1 602705 602711 TT_3 6
hpat1 602712 602716 GA_2 4
hpat1 602726 602730 CT_2 4
hpat1 602746 602750 TA_2 4
hpat1 602799 602805 TCC_2 6
hpat1 602840 602844 TG_2 4
+hpat1 602858 602862 TT_2 4
+hpat1 602865 602871 TT_3 6
hpat1 602874 602878 AG_2 4
+hpat1 602884 602894 TT_5 10
hpat1 602921 602925 TC_2 4
hpat1 602973 602977 GA_2 4
hpat1 603003 603007 TC_2 4
+hpat1 603015 603019 TT_2 4
+hpat1 603028 603032 TT_2 4
+hpat1 603062 603066 CC_2 4
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hpat1 603075 603079 AC_2 4
hpat1 603084 603088 AG_2 4
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hpat1 603140 603144 GT_2 4
+hpat1 603157 603165 TTCT_2 8
hpat1 603187 603199 GAAGTG_2 12
-hpat1 603225 603229 GA_2 4
-hpat1 603237 603241 GA_2 4
+hpat1 603203 603211 GGTG_2 8
+hpat1 603224 603228 AG_2 4
+hpat1 603236 603242 AG_3 6
hpat1 603255 603259 AT_2 4
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+hpat1 603299 603303 AA_2 4
hpat1 603303 603307 TA_2 4
+hpat1 603314 603318 GA_2 4
hpat1 603321 603325 GT_2 4
hpat1 603336 603342 CTT_2 6
-hpat1 603369 603375 TAA_2 6
-hpat1 603375 603381 TAT_2 6
+hpat1 603348 603352 AA_2 4
+hpat1 603367 603376 AAT_3 9
+hpat1 603376 603382 ATT_2 6
+hpat1 603384 603388 GG_2 4
+hpat1 603393 603397 AT_2 4
hpat1 603405 603409 CT_2 4
hpat1 603430 603434 CA_2 4
hpat1 603438 603442 TC_2 4
+hpat1 603460 603464 AT_2 4
hpat1 603472 603476 TA_2 4
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hpat1 603522 603526 CA_2 4
-hpat1 603565 603571 GTG_2 6
+hpat1 603564 603568 TG_2 4
+hpat1 603592 603596 CC_2 4
+hpat1 603597 603601 GG_2 4
hpat1 603620 603624 CA_2 4
hpat1 603627 603631 CT_2 4
-hpat1 603640 603644 AG_2 4
+hpat1 603639 603643 GA_2 4
+hpat1 603661 603665 AG_2 4
+hpat1 603671 603675 TT_2 4
hpat1 603682 603686 AG_2 4
hpat1 603702 603706 AG_2 4
hpat1 603723 603729 AG_3 6
hpat1 603737 603743 TGC_2 6
+hpat1 603752 603758 CCT_2 6
+hpat1 603774 603784 AAGGA_2 10
+hpat1 603803 603807 TT_2 4
+hpat1 603825 603831 AAT_2 6
hpat1 603834 603838 GT_2 4
hpat1 603871 603875 AC_2 4
-hpat1 603885 603889 TG_2 4
-hpat1 603907 603911 TG_2 4
+hpat1 603884 603888 GT_2 4
+hpat1 603900 603904 AA_2 4
+hpat1 603906 603910 GT_2 4
+hpat1 603958 603962 AA_2 4
hpat1 603981 603985 AG_2 4
-hpat1 604048 604052 AG_2 4
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hpat1 604109 604113 AC_2 4
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hpat1 604179 604185 CAT_2 6
hpat1 604207 604211 CT_2 4
hpat1 604264 604268 AC_2 4
+hpat1 604273 604277 TG_2 4
hpat1 604288 604294 CA_3 6
-hpat1 604337 604343 TAT_2 6
+hpat1 604297 604301 AC_2 4
+hpat1 604305 604309 TG_2 4
+hpat1 604322 604326 AA_2 4
+hpat1 604336 604340 AT_2 4
hpat1 604346 604350 CA_2 4
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+hpat1 604362 604368 AA_3 6
hpat1 604399 604403 TA_2 4
-hpat1 604406 604410 AT_2 4
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hpat1 604486 604490 TG_2 4
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hpat1 604520 604526 TCA_2 6
+hpat1 604539 604543 TT_2 4
hpat1 604563 604567 AC_2 4
hpat1 604579 604583 AT_2 4
-hpat1 604595 604599 CA_2 4
+hpat1 604590 604598 TCAC_2 8
hpat1 604634 604642 TGAA_2 8
hpat1 604654 604658 CA_2 4
hpat1 604661 604667 TCT_2 6
hpat1 604675 604679 CA_2 4
+hpat1 604731 604735 GG_2 4
hpat1 604766 604770 AC_2 4
+hpat1 604770 604774 AA_2 4
+hpat1 604780 604784 AA_2 4
hpat1 604784 604788 TG_2 4
+hpat1 604803 604807 AA_2 4
hpat1 604812 604818 GTT_2 6
hpat1 604822 604826 GT_2 4
hpat1 604826 604830 GA_2 4
-hpat1 604837 604843 GAA_2 6
+hpat1 604835 604844 AAG_3 9
hpat1 604849 604853 GT_2 4
hpat1 604865 604869 TC_2 4
+hpat1 604895 604903 AA_4 8
+hpat1 604903 604913 TT_5 10
hpat1 604914 604918 GA_2 4
hpat1 604923 604927 TC_2 4
hpat1 604928 604932 CT_2 4
hpat1 604951 604957 GTG_2 6
hpat1 604960 604964 TC_2 4
+hpat1 605001 605005 TC_2 4
hpat1 605039 605043 CA_2 4
-hpat1 605050 605054 AC_2 4
-hpat1 605078 605082 AG_2 4
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+hpat1 605070 605074 TT_2 4
+hpat1 605074 605080 TAG_2 6
hpat1 605111 605115 TC_2 4
hpat1 605183 605187 GC_2 4
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hpat1 605214 605220 CTC_2 6
hpat1 605240 605244 GA_2 4
hpat1 605254 605258 GT_2 4
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hpat1 605316 605322 TAA_2 6
hpat1 605333 605339 ATT_2 6
hpat1 605339 605345 TAA_2 6
+hpat1 605358 605364 CGT_2 6
hpat1 605368 605372 CA_2 4
+hpat1 605376 605380 GA_2 4
+hpat1 605403 605407 GG_2 4
+hpat1 605413 605417 AA_2 4
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hpat1 605442 605446 TG_2 4
hpat1 605448 605454 TGA_2 6
-hpat1 605477 605481 AG_2 4
+hpat1 605466 605470 GG_2 4
+hpat1 605472 605476 TG_2 4
+hpat1 605476 605482 GA_3 6
+hpat1 605491 605497 AAC_2 6
hpat1 605517 605521 TG_2 4
hpat1 605524 605528 CA_2 4
hpat1 605533 605537 CA_2 4
hpat1 605554 605558 CA_2 4
+hpat1 605594 605598 TT_2 4
+hpat1 605631 605635 GG_2 4
hpat1 605636 605640 TG_2 4
-hpat1 605661 605665 AG_2 4
+hpat1 605660 605664 GA_2 4
hpat1 605667 605671 AG_2 4
+hpat1 605693 605697 TC_2 4
+hpat1 605699 605703 CC_2 4
hpat1 605706 605712 TG_3 6
-hpat1 605726 605730 TC_2 4
+hpat1 605725 605729 CT_2 4
hpat1 605762 605766 TG_2 4
hpat1 605779 605785 CA_3 6
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hpat1 616125 616129 AG_2 4
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hpat1 616350 616354 TC_2 4
hpat1 616375 616379 AG_2 4
hpat1 616388 616394 TGG_2 6
@@ -21662,122 +41193,251 @@
hpat1 616417 616425 TCAC_2 8
hpat1 616438 616442 GT_2 4
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hpat1 619902 619906 GA_2 4
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hpat1 619935 619941 AG_3 6
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hpat1 619953 619959 AG_3 6
hpat1 619962 619966 GA_2 4
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hpat1 619988 619998 AG_5 10
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hpat1 620105 620113 CA_4 8
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hpat1 620127 620136 GAG_3 9
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hpat1 620194 620200 AGC_2 6
hpat1 620255 620261 AGC_2 6
hpat1 620291 620295 TG_2 4
@@ -21787,34 +41447,70 @@
hpat1 620336 620346 TGGGG_2 10
hpat1 620382 620386 TG_2 4
hpat1 620391 620397 GAA_2 6
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hpat1 620579 620587 CAGC_2 8
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hpat1 620861 620867 GAG_2 6
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hpat1 621029 621038 GTG_3 9
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hpat1 621049 621061 AGGGCC_2 12
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hpat1 621191 621197 TGG_2 6
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hpat1 621251 621257 TG_3 6
hpat1 621283 621287 TG_2 4
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hpat1 621401 621405 AG_2 4
-hpat1 621441 621445 GT_2 4
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hpat1 621454 621458 CA_2 4
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hpat1 621495 621499 TG_2 4
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hpat1 621562 621566 AG_2 4
hpat1 621573 621579 TAA_2 6
hpat1 621582 621586 TG_2 4
@@ -21822,476 +41518,991 @@
hpat1 621594 621602 ATGA_2 8
hpat1 621627 621633 GAG_2 6
hpat1 621638 621642 GT_2 4
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hpat1 621694 621700 GAT_2 6
hpat1 621712 621718 CAA_2 6
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hpat1 621802 621806 TC_2 4
hpat1 621807 621813 GAT_2 6
hpat1 621822 621826 GT_2 4
hpat1 621836 621840 TG_2 4
hpat1 621842 621848 TC_3 6
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hpat1 621910 621914 AG_2 4
hpat1 621923 621929 ACA_2 6
hpat1 621942 621946 GA_2 4
hpat1 621947 621953 TGT_2 6
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hpat1 622050 622054 GT_2 4
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hpat1 622119 622123 GA_2 4
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hpat1 622149 622153 TG_2 4
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hpat1 622291 622297 TGG_2 6
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hpat1 622427 622436 GTG_3 9
hpat1 622459 622465 AGG_2 6
hpat1 622474 622478 GA_2 4
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hpat1 622497 622501 AG_2 4
hpat1 622514 622518 GA_2 4
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hpat1 622535 622539 AG_2 4
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hpat1 622549 622553 TC_2 4
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hpat1 622573 622582 CAC_3 9
hpat1 622585 622606 CAC_7 21
hpat1 622609 622613 CA_2 4
hpat1 622621 622625 AT_2 4
hpat1 622632 622641 ATA_3 9
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hpat1 622726 622730 GA_2 4
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hpat1 623129 623135 CA_3 6
hpat1 623137 623143 CA_3 6
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hpat1 623175 623179 AG_2 4
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hpat1 623226 623232 TC_3 6
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hpat1 623260 623266 GAA_2 6
hpat1 623268 623274 CAA_2 6
hpat1 623278 623284 AGA_2 6
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hpat1 623334 623338 GA_2 4
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hpat1 623461 623471 TGATA_2 10
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hpat1 624001 624005 GA_2 4
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hpat1 624124 624128 TG_2 4
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hpat1 625132 625150 ATTTTT_3 18
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hpat1 625594 625606 AGCCAG_2 12
hpat1 625612 625620 TCCT_2 8
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hpat1 626318 626324 AGG_2 6
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hpat1 626687 626695 TAAA_2 8
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hpat1 626855 626859 AG_2 4
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hpat1 626996 627002 TGG_2 6
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hpat1 627168 627172 TG_2 4
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hpat1 627200 627206 CGA_2 6
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hpat1 627280 627286 ATC_2 6
hpat1 627297 627306 ATC_3 9
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hpat1 627348 627354 GCT_2 6
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hpat1 627371 627379 CAGC_2 8
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hpat1 635992 635996 TG_2 4
+hpat1 636013 636017 TT_2 4
+hpat1 636017 636021 TG_2 4
+hpat1 636030 636034 CC_2 4
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hpat1 636066 636070 TC_2 4
-hpat1 636097 636105 TA_4 8
+hpat1 636076 636080 TT_2 4
+hpat1 636096 636104 AT_4 8
hpat1 636127 636131 CA_2 4
hpat1 636155 636159 TG_2 4
+hpat1 636171 636177 GAA_2 6
hpat1 636220 636224 AG_2 4
hpat1 636233 636237 TG_2 4
hpat1 636238 636244 AGG_2 6
hpat1 636244 636248 CA_2 4
hpat1 636262 636266 AG_2 4
+hpat1 636300 636306 CAG_2 6
hpat1 636332 636336 GA_2 4
hpat1 636339 636347 GTGG_2 8
hpat1 636355 636359 GT_2 4
+hpat1 636367 636371 GG_2 4
hpat1 636408 636412 CA_2 4
+hpat1 636413 636417 GA_2 4
+hpat1 636440 636444 GC_2 4
hpat1 636457 636461 AG_2 4
+hpat1 636468 636472 CT_2 4
hpat1 636481 636487 CAG_2 6
-hpat1 636502 636508 ATG_2 6
+hpat1 636501 636507 GAT_2 6
hpat1 636508 636512 GT_2 4
+hpat1 636515 636519 GG_2 4
hpat1 636521 636529 AGGG_2 8
hpat1 636544 636548 AC_2 4
-hpat1 636600 636604 GA_2 4
-hpat1 636641 636645 AC_2 4
-hpat1 636655 636659 AG_2 4
+hpat1 636554 636558 GG_2 4
+hpat1 636567 636571 GG_2 4
+hpat1 636581 636585 GG_2 4
+hpat1 636599 636603 AG_2 4
+hpat1 636603 636607 AA_2 4
+hpat1 636609 636613 GA_2 4
+hpat1 636634 636638 GG_2 4
+hpat1 636640 636646 CA_3 6
+hpat1 636654 636658 GA_2 4
+hpat1 636668 636672 CT_2 4
+hpat1 636687 636691 GG_2 4
hpat1 636708 636712 AG_2 4
hpat1 636714 636718 CT_2 4
+hpat1 636718 636722 GG_2 4
+hpat1 636725 636729 CC_2 4
hpat1 636734 636738 GT_2 4
hpat1 636740 636746 GCG_2 6
-hpat1 636758 636764 TGC_2 6
-hpat1 636777 636783 CT_3 6
+hpat1 636753 636759 CCT_2 6
+hpat1 636759 636765 GCT_2 6
+hpat1 636776 636784 TC_4 8
+hpat1 636791 636795 CA_2 4
hpat1 636799 636805 ATT_2 6
hpat1 636805 636811 CAG_2 6
hpat1 636817 636823 GCA_2 6
@@ -22300,170 +42511,315 @@
hpat1 636850 636854 CA_2 4
hpat1 636866 636870 TC_2 4
hpat1 636872 636878 CTC_2 6
-hpat1 636882 636888 CAG_2 6
+hpat1 636880 636884 CA_2 4
+hpat1 636890 636894 GG_2 4
hpat1 636894 636900 CA_3 6
+hpat1 636903 636907 CT_2 4
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hpat1 636948 636952 AG_2 4
-hpat1 636954 636960 CTG_2 6
-hpat1 637024 637032 AGGC_2 8
+hpat1 636953 636959 GCT_2 6
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+hpat1 637007 637013 AGG_2 6
+hpat1 637023 637031 CAGG_2 8
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hpat1 637057 637063 TGG_2 6
+hpat1 637072 637078 ATG_2 6
hpat1 637113 637117 TG_2 4
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hpat1 637144 637152 CAGA_2 8
+hpat1 637154 637164 TAAGG_2 10
hpat1 637169 637173 GA_2 4
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hpat1 637246 637250 AG_2 4
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hpat1 637259 637263 AG_2 4
hpat1 637271 637275 TG_2 4
hpat1 637311 637315 AG_2 4
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hpat1 637336 637340 GT_2 4
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hpat1 637387 637391 AG_2 4
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+hpat1 637419 637423 GT_2 4
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hpat1 637456 637464 ATAA_2 8
hpat1 637467 637471 TG_2 4
-hpat1 637529 637537 TGTA_2 8
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hpat1 637546 637550 AG_2 4
hpat1 637565 637569 AG_2 4
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hpat1 637715 637719 TC_2 4
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hpat1 637746 637755 GTG_3 9
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+hpat1 637853 637861 CCAG_2 8
+hpat1 637885 637901 AA_8 16
hpat1 637908 637912 GA_2 4
hpat1 637914 637918 AG_2 4
hpat1 637931 637937 CA_3 6
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hpat1 637995 637999 AC_2 4
hpat1 638000 638004 GA_2 4
hpat1 638014 638018 GA_2 4
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hpat1 638024 638028 GA_2 4
hpat1 638039 638043 AG_2 4
hpat1 638045 638051 AGA_2 6
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hpat1 638076 638082 GTG_2 6
-hpat1 638090 638098 CATG_2 8
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hpat1 638113 638117 TC_2 4
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hpat1 638131 638137 CTA_2 6
-hpat1 638219 638223 CA_2 4
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hpat1 638231 638235 TA_2 4
hpat1 638235 638239 AT_2 4
hpat1 638245 638251 TGG_2 6
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hpat1 638275 638279 TC_2 4
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hpat1 638290 638294 AG_2 4
hpat1 638296 638302 AG_3 6
hpat1 638310 638314 CT_2 4
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hpat1 638336 638342 AG_3 6
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hpat1 638367 638371 TG_2 4
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hpat1 638403 638407 AC_2 4
hpat1 638409 638413 GT_2 4
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hpat1 638448 638452 AG_2 4
hpat1 638456 638464 TGGG_2 8
hpat1 638473 638477 TC_2 4
hpat1 638478 638482 TG_2 4
+hpat1 638499 638503 GG_2 4
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hpat1 638510 638514 AC_2 4
hpat1 638536 638540 AC_2 4
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hpat1 638604 638610 GTG_2 6
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+hpat1 638657 638663 CAG_2 6
hpat1 638663 638667 AT_2 4
hpat1 638668 638674 AC_3 6
hpat1 638688 638696 ACTG_2 8
hpat1 638697 638701 CA_2 4
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hpat1 638722 638726 TC_2 4
hpat1 638744 638748 TG_2 4
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hpat1 638790 638794 GT_2 4
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hpat1 638804 638808 GC_2 4
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hpat1 638953 638959 ATC_2 6
hpat1 638959 638965 ACT_2 6
hpat1 638972 638976 TC_2 4
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hpat1 639008 639012 AG_2 4
hpat1 639016 639022 AG_3 6
hpat1 639043 639049 CA_3 6
hpat1 639051 639055 AG_2 4
hpat1 639087 639091 TC_2 4
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hpat1 639184 639188 GT_2 4
hpat1 639196 639200 CT_2 4
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hpat1 639290 639296 TGC_2 6
hpat1 639302 639308 GC_3 6
hpat1 639308 639314 CGC_2 6
-hpat1 639346 639350 GC_2 4
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hpat1 639386 639392 TCG_2 6
-hpat1 639394 639400 GCC_2 6
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hpat1 639408 639414 CGC_2 6
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hpat1 639487 639493 GC_3 6
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hpat1 639569 639575 GCC_2 6
hpat1 639581 639585 GC_2 4
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hpat1 639595 639599 CT_2 4
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hpat1 639627 639631 GC_2 4
hpat1 639631 639637 CG_3 6
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hpat1 639691 639695 CG_2 4
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hpat1 639707 639711 CG_2 4
-hpat1 639741 639759 GCGGGG_3 18
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hpat1 639809 639813 GC_2 4
hpat1 639813 639819 TGC_2 6
hpat1 639822 639828 GCT_2 6
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hpat1 639891 639895 TG_2 4
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hpat1 639922 639926 GT_2 4
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hpat1 639989 639995 AGA_2 6
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hpat1 640002 640006 GA_2 4
hpat1 640006 640010 CA_2 4
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hpat1 640086 640090 AG_2 4
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hpat1 640140 640144 CA_2 4
hpat1 640160 640164 CG_2 4
hpat1 640171 640179 TGGG_2 8
-hpat1 640196 640200 AC_2 4
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hpat1 640217 640223 ACA_2 6
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hpat1 640268 640278 TGAAA_2 10
hpat1 640285 640289 CA_2 4
hpat1 640300 640304 TG_2 4
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hpat1 640385 640393 CTTC_2 8
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hpat1 640505 640509 AC_2 4
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hpat1 640539 640545 TGC_2 6
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hpat1 640569 640575 GA_3 6
hpat1 640587 640591 CT_2 4
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hpat1 640627 640635 ATTT_2 8
hpat1 640646 640652 TC_3 6
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hpat1 640671 640675 AC_2 4
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hpat1 640714 640718 GC_2 4
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hpat1 640753 640757 AC_2 4
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hpat1 640788 640792 AG_2 4
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hpat1 640872 640876 AG_2 4
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hpat1 640889 640893 CT_2 4
hpat1 640904 640910 ATC_2 6
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hpat1 640962 640966 AT_2 4
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hpat1 641033 641041 AGGT_2 8
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hpat1 641074 641078 TG_2 4
hpat1 641094 641102 CTGG_2 8
hpat1 641113 641117 CA_2 4
hpat1 641145 641153 AGGC_2 8
hpat1 641176 641180 GA_2 4
hpat1 641208 641212 TC_2 4
+hpat1 641216 641220 AA_2 4
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hpat1 641231 641239 AGGC_2 8
hpat1 641240 641246 TGG_2 6
hpat1 641246 641252 CG_3 6
hpat1 641272 641276 AG_2 4
hpat1 641279 641283 GA_2 4
+hpat1 641286 641290 GA_2 4
hpat1 641303 641307 GA_2 4
hpat1 641310 641314 AG_2 4
hpat1 641327 641331 GA_2 4
hpat1 641357 641363 GA_3 6
hpat1 641365 641369 GA_2 4
hpat1 641369 641375 CT_3 6
-hpat1 641424 641430 ATC_2 6
-hpat1 641453 641457 TG_2 4
+hpat1 641378 641386 AA_4 8
+hpat1 641387 641395 AA_4 8
+hpat1 641415 641419 TT_2 4
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hpat1 641494 641504 CATCA_2 10
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hpat1 641564 641570 GAA_2 6
+hpat1 641577 641585 CTGG_2 8
hpat1 641596 641600 CA_2 4
hpat1 641615 641621 CTC_2 6
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hpat1 641636 641640 CT_2 4
hpat1 641643 641647 CA_2 4
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hpat1 641660 641664 TG_2 4
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+hpat1 641671 641675 CA_2 4
hpat1 641680 641684 TG_2 4
hpat1 641718 641722 TG_2 4
hpat1 641731 641735 CT_2 4
@@ -22474,338 +42830,664 @@
hpat1 641806 641812 AT_3 6
hpat1 641838 641842 GA_2 4
hpat1 641853 641857 TC_2 4
+hpat1 641860 641864 CC_2 4
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hpat1 641885 641889 TG_2 4
hpat1 641893 641897 CT_2 4
hpat1 641906 641910 AG_2 4
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hpat1 641970 641974 CA_2 4
hpat1 641986 641992 AG_3 6
hpat1 641992 641996 GT_2 4
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hpat1 642029 642033 AG_2 4
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hpat1 642145 642149 AC_2 4
hpat1 642154 642158 TC_2 4
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hpat1 642219 642223 TA_2 4
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hpat1 642266 642272 TG_3 6
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hpat1 642339 642343 CA_2 4
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hpat1 642397 642401 CA_2 4
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hpat1 642457 642461 AG_2 4
hpat1 642469 642475 TC_3 6
hpat1 642476 642480 GT_2 4
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+hpat1 642617 642625 AAGT_2 8
hpat1 642626 642632 GA_3 6
-hpat1 642640 642644 CT_2 4
-hpat1 642653 642659 CAG_2 6
+hpat1 642632 642642 TTTCT_2 10
+hpat1 642647 642655 CTCA_2 8
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hpat1 642667 642671 TC_2 4
hpat1 642700 642706 GAT_2 6
hpat1 642732 642738 ACA_2 6
hpat1 642738 642742 GA_2 4
hpat1 642758 642762 GT_2 4
-hpat1 642876 642880 AG_2 4
-hpat1 642914 642920 GCT_2 6
+hpat1 642765 642769 CT_2 4
+hpat1 642771 642783 AA_6 12
+hpat1 642814 642820 GCT_2 6
+hpat1 642862 642868 CAT_2 6
+hpat1 642872 642878 CAG_2 6
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hpat1 642933 642937 TC_2 4
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hpat1 642984 642988 AT_2 4
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hpat1 643013 643017 TC_2 4
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hpat1 643027 643031 TA_2 4
hpat1 643031 643035 AC_2 4
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hpat1 643067 643071 CA_2 4
+hpat1 643077 643081 CC_2 4
hpat1 643100 643104 AT_2 4
hpat1 643127 643131 TG_2 4
-hpat1 643150 643154 CT_2 4
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+hpat1 643161 643167 GAA_2 6
hpat1 643168 643172 AG_2 4
hpat1 643181 643189 TAGC_2 8
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hpat1 643203 643207 CT_2 4
hpat1 643226 643230 CA_2 4
hpat1 643230 643234 GA_2 4
-hpat1 643239 643247 AG_4 8
+hpat1 643238 643248 GA_5 10
hpat1 643277 643281 AT_2 4
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hpat1 643307 643311 AC_2 4
-hpat1 643337 643343 ATT_2 6
-hpat1 643343 643349 TAT_2 6
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+hpat1 643338 643346 TTAT_2 8
+hpat1 643346 643350 TA_2 4
+hpat1 643403 643413 GGCTA_2 10
+hpat1 643419 643423 GG_2 4
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hpat1 643443 643447 AC_2 4
hpat1 643453 643457 TC_2 4
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hpat1 650126 650132 GCA_2 6
-hpat1 650143 650147 GA_2 4
+hpat1 650140 650144 CG_2 4
hpat1 650162 650168 CGC_2 6
+hpat1 650171 650175 TG_2 4
+hpat1 650175 650179 GC_2 4
+hpat1 650183 650187 TG_2 4
hpat1 650207 650211 GC_2 4
hpat1 650219 650223 AC_2 4
hpat1 650250 650256 GC_3 6
hpat1 650258 650266 GCTG_2 8
+hpat1 650288 650292 TG_2 4
hpat1 650304 650310 CGA_2 6
+hpat1 650335 650339 GC_2 4
hpat1 650340 650344 CG_2 4
-hpat1 650355 650361 GCC_2 6
+hpat1 650353 650359 CCG_2 6
hpat1 650366 650370 GC_2 4
+hpat1 650370 650374 CC_2 4
hpat1 650374 650380 GC_3 6
-hpat1 650383 650389 GC_3 6
+hpat1 650382 650388 CG_3 6
+hpat1 650388 650394 CC_3 6
+hpat1 650395 650399 GC_2 4
+hpat1 650399 650403 CC_2 4
+hpat1 650403 650407 CG_2 4
hpat1 650407 650411 TC_2 4
+hpat1 650416 650422 CC_3 6
+hpat1 650426 650430 CC_2 4
hpat1 650430 650436 GCC_2 6
-hpat1 650444 650453 GCC_3 9
+hpat1 650436 650446 CCCGC_2 10
+hpat1 650446 650455 CGC_3 9
hpat1 650457 650461 GC_2 4
hpat1 650467 650471 GA_2 4
hpat1 650472 650478 GAA_2 6
hpat1 650506 650512 GCC_2 6
+hpat1 650513 650517 CC_2 4
hpat1 650526 650532 GC_3 6
+hpat1 650556 650560 GG_2 4
hpat1 650568 650574 CTC_2 6
-hpat1 650577 650583 CGC_2 6
+hpat1 650576 650580 GC_2 4
hpat1 650583 650589 CGG_2 6
hpat1 650592 650596 CG_2 4
+hpat1 650605 650609 GG_2 4
hpat1 650643 650649 GCT_2 6
+hpat1 650650 650654 GG_2 4
+hpat1 650665 650669 GG_2 4
+hpat1 650680 650684 GG_2 4
hpat1 650686 650690 GA_2 4
+hpat1 650696 650700 GG_2 4
hpat1 650704 650708 GA_2 4
+hpat1 650712 650716 GC_2 4
+hpat1 650719 650723 AG_2 4
hpat1 650738 650742 GC_2 4
hpat1 650752 650756 GC_2 4
+hpat1 650767 650771 GC_2 4
hpat1 650774 650778 TG_2 4
hpat1 650790 650796 GTG_2 6
hpat1 650797 650801 TC_2 4
hpat1 650816 650820 CT_2 4
+hpat1 650844 650852 TTCC_2 8
hpat1 650874 650880 GCC_2 6
+hpat1 650881 650885 CC_2 4
+hpat1 650899 650903 GG_2 4
hpat1 650918 650922 AG_2 4
hpat1 650944 650948 CA_2 4
-hpat1 650967 650973 ATA_2 6
+hpat1 650950 650954 CG_2 4
+hpat1 650966 650970 TA_2 4
hpat1 650987 650991 AG_2 4
+hpat1 650999 651003 GC_2 4
hpat1 651003 651009 AG_3 6
hpat1 651011 651017 GCA_2 6
hpat1 651056 651060 GT_2 4
hpat1 651079 651083 TC_2 4
+hpat1 651088 651094 CAA_2 6
hpat1 651096 651102 TGC_2 6
-hpat1 651121 651125 CT_2 4
+hpat1 651120 651124 TC_2 4
hpat1 651128 651132 TC_2 4
+hpat1 651134 651138 TT_2 4
+hpat1 651147 651151 AA_2 4
+hpat1 651158 651162 TG_2 4
hpat1 651167 651171 AC_2 4
hpat1 651210 651216 ATA_2 6
hpat1 651219 651225 GT_3 6
@@ -22813,138 +43495,231 @@
hpat1 651247 651251 CT_2 4
hpat1 651275 651279 CT_2 4
hpat1 651285 651289 CA_2 4
+hpat1 651317 651321 CC_2 4
hpat1 651327 651331 TG_2 4
+hpat1 651350 651354 GG_2 4
hpat1 651371 651377 TA_3 6
hpat1 651386 651392 TAT_2 6
+hpat1 651400 651404 TT_2 4
hpat1 651406 651414 CTTG_2 8
hpat1 651414 651418 GA_2 4
hpat1 651421 651425 TC_2 4
-hpat1 651435 651439 AC_2 4
+hpat1 651427 651431 CC_2 4
+hpat1 651431 651437 CAC_2 6
hpat1 651439 651443 TG_2 4
+hpat1 651447 651451 CC_2 4
hpat1 651462 651468 TG_3 6
hpat1 651473 651477 CA_2 4
-hpat1 651495 651499 TG_2 4
+hpat1 651494 651498 GT_2 4
hpat1 651526 651530 CA_2 4
+hpat1 651573 651577 GG_2 4
hpat1 651581 651587 GT_3 6
+hpat1 651611 651615 GG_2 4
hpat1 651642 651646 CT_2 4
hpat1 651650 651656 GTC_2 6
hpat1 651669 651673 GA_2 4
-hpat1 651686 651695 TCC_3 9
-hpat1 651749 651757 TGGG_2 8
+hpat1 651675 651685 TCCCC_2 10
+hpat1 651685 651694 CTC_3 9
+hpat1 651746 651752 TGG_2 6
+hpat1 651763 651767 GG_2 4
hpat1 651767 651771 TC_2 4
+hpat1 651774 651778 GG_2 4
+hpat1 651786 651790 GG_2 4
+hpat1 651792 651796 TC_2 4
+hpat1 651803 651807 GG_2 4
+hpat1 651818 651830 TGCCTC_2 12
hpat1 651862 651866 GA_2 4
-hpat1 651888 651892 AG_2 4
+hpat1 651870 651874 GG_2 4
+hpat1 651887 651891 GA_2 4
+hpat1 651908 651912 TT_2 4
hpat1 651949 651953 TG_2 4
+hpat1 651957 651961 CA_2 4
+hpat1 652001 652005 GG_2 4
+hpat1 652020 652024 TC_2 4
+hpat1 652031 652035 CC_2 4
hpat1 652036 652040 GA_2 4
hpat1 652050 652056 CTC_2 6
-hpat1 652062 652068 TCC_2 6
-hpat1 652099 652105 AGG_2 6
+hpat1 652060 652066 CCT_2 6
+hpat1 652066 652070 CC_2 4
+hpat1 652073 652079 CCT_2 6
+hpat1 652097 652103 GGA_2 6
+hpat1 652106 652110 TT_2 4
+hpat1 652114 652118 GG_2 4
+hpat1 652142 652146 TT_2 4
hpat1 652155 652159 CT_2 4
-hpat1 652177 652181 AC_2 4
-hpat1 652213 652217 TC_2 4
+hpat1 652176 652182 CA_3 6
+hpat1 652212 652216 CT_2 4
hpat1 652235 652239 AC_2 4
hpat1 652250 652256 TG_3 6
-hpat1 652272 652276 TG_2 4
+hpat1 652256 652260 CC_2 4
+hpat1 652271 652275 GT_2 4
+hpat1 652282 652286 TT_2 4
+hpat1 652289 652293 CT_2 4
hpat1 652300 652306 CAG_2 6
hpat1 652310 652314 CA_2 4
+hpat1 652319 652323 CT_2 4
hpat1 652324 652330 CA_3 6
+hpat1 652338 652342 TG_2 4
+hpat1 652369 652375 GG_3 6
hpat1 652375 652379 CT_2 4
-hpat1 652399 652411 ATAGTG_2 12
+hpat1 652394 652398 GG_2 4
+hpat1 652398 652410 GATAGT_2 12
+hpat1 652415 652421 TT_3 6
+hpat1 652426 652430 GG_2 4
hpat1 652430 652434 AG_2 4
hpat1 652434 652438 GA_2 4
-hpat1 652447 652451 TC_2 4
+hpat1 652446 652450 CT_2 4
hpat1 652462 652466 TC_2 4
hpat1 652480 652484 TG_2 4
+hpat1 652494 652498 CC_2 4
hpat1 652552 652556 GT_2 4
+hpat1 652596 652602 CC_3 6
hpat1 652602 652614 TCCTTC_2 12
hpat1 652641 652647 TGA_2 6
hpat1 652647 652653 TAA_2 6
+hpat1 652659 652663 AT_2 4
hpat1 652678 652684 TG_3 6
hpat1 652691 652695 CT_2 4
-hpat1 652715 652721 ATC_2 6
-hpat1 652729 652735 TCA_2 6
+hpat1 652714 652720 CAT_2 6
+hpat1 652728 652734 ATC_2 6
+hpat1 652736 652740 AA_2 4
hpat1 652743 652747 CT_2 4
hpat1 652750 652754 CA_2 4
hpat1 652774 652778 GT_2 4
+hpat1 652797 652801 GG_2 4
+hpat1 652825 652829 CC_2 4
+hpat1 652839 652843 CA_2 4
hpat1 652853 652859 TCC_2 6
hpat1 652859 652865 AGG_2 6
hpat1 652869 652873 TG_2 4
+hpat1 652904 652912 CTAG_2 8
+hpat1 652920 652926 TAA_2 6
+hpat1 652931 652935 TG_2 4
hpat1 652942 652951 TGA_3 9
+hpat1 652971 652975 CC_2 4
hpat1 652992 652996 TA_2 4
hpat1 653015 653019 TC_2 4
hpat1 653033 653037 TC_2 4
hpat1 653038 653042 TG_2 4
+hpat1 653045 653049 GG_2 4
+hpat1 653053 653065 GGAAGG_2 12
hpat1 653066 653076 TGGTT_2 10
-hpat1 653082 653086 CA_2 4
+hpat1 653081 653085 AC_2 4
+hpat1 653105 653113 TGGG_2 8
+hpat1 653114 653118 TG_2 4
+hpat1 653128 653136 TT_4 8
+hpat1 653137 653141 AA_2 4
+hpat1 653156 653160 GG_2 4
hpat1 653191 653197 TAT_2 6
hpat1 653208 653212 AT_2 4
+hpat1 653218 653222 AG_2 4
+hpat1 653223 653227 AA_2 4
+hpat1 653252 653256 TT_2 4
hpat1 653258 653262 CT_2 4
-hpat1 653275 653279 GT_2 4
+hpat1 653270 653276 CAG_2 6
+hpat1 653276 653280 TG_2 4
+hpat1 653301 653305 CT_2 4
hpat1 653306 653310 TG_2 4
hpat1 653311 653315 CT_2 4
+hpat1 653328 653332 GG_2 4
hpat1 653347 653353 TA_3 6
hpat1 653371 653375 CT_2 4
hpat1 653376 653380 AG_2 4
hpat1 653386 653390 TG_2 4
hpat1 653397 653401 CT_2 4
-hpat1 653415 653419 AC_2 4
+hpat1 653414 653420 CA_3 6
+hpat1 653433 653437 CC_2 4
hpat1 653441 653447 AC_3 6
+hpat1 653449 653455 GGT_2 6
+hpat1 653463 653467 TT_2 4
hpat1 653469 653475 AGA_2 6
hpat1 653486 653490 CA_2 4
+hpat1 653516 653520 TG_2 4
hpat1 653533 653537 AG_2 4
hpat1 653554 653562 TGGC_2 8
-hpat1 653605 653611 TAA_2 6
+hpat1 653565 653569 TT_2 4
+hpat1 653573 653579 CCA_2 6
+hpat1 653592 653598 TTA_2 6
+hpat1 653603 653609 AAT_2 6
hpat1 653614 653618 TC_2 4
hpat1 653632 653636 TG_2 4
-hpat1 653663 653667 CA_2 4
+hpat1 653657 653661 CC_2 4
+hpat1 653662 653666 AC_2 4
hpat1 653670 653676 TGC_2 6
-hpat1 653679 653683 TC_2 4
+hpat1 653678 653684 CT_3 6
+hpat1 653688 653692 CT_2 4
hpat1 653708 653712 TG_2 4
+hpat1 653738 653742 AA_2 4
hpat1 653753 653759 TAG_2 6
hpat1 653777 653781 AG_2 4
+hpat1 653784 653788 TC_2 4
hpat1 653797 653801 CT_2 4
-hpat1 653815 653821 CTG_2 6
+hpat1 653808 653812 GC_2 4
+hpat1 653813 653817 CT_2 4
+hpat1 653819 653825 TGG_2 6
hpat1 653831 653835 GC_2 4
+hpat1 653844 653850 TCC_2 6
+hpat1 653858 653862 GG_2 4
hpat1 653862 653866 CT_2 4
hpat1 653870 653876 GAA_2 6
+hpat1 653879 653883 GG_2 4
hpat1 653889 653895 CAA_2 6
+hpat1 653897 653903 GCT_2 6
hpat1 653912 653920 AGGG_2 8
hpat1 653928 653932 GT_2 4
-hpat1 653963 653967 AC_2 4
+hpat1 653947 653951 TG_2 4
+hpat1 653954 653964 CCAGA_2 10
+hpat1 653968 653976 CAGT_2 8
+hpat1 653979 653983 TT_2 4
hpat1 653993 653997 GA_2 4
hpat1 654003 654007 TG_2 4
hpat1 654007 654011 AG_2 4
-hpat1 654014 654018 GT_2 4
+hpat1 654013 654019 TG_3 6
hpat1 654027 654036 AGG_3 9
+hpat1 654052 654056 TG_2 4
hpat1 654058 654062 TG_2 4
hpat1 654093 654097 TA_2 4
hpat1 654138 654144 CAT_2 6
hpat1 654162 654168 ATG_2 6
hpat1 654168 654172 CT_2 4
+hpat1 654176 654180 CC_2 4
hpat1 654191 654197 CTC_2 6
+hpat1 654205 654209 CC_2 4
+hpat1 654210 654214 TT_2 4
hpat1 654223 654227 CA_2 4
hpat1 654231 654235 TC_2 4
-hpat1 654275 654279 AC_2 4
+hpat1 654274 654278 CA_2 4
hpat1 654282 654286 TA_2 4
hpat1 654295 654301 ATA_2 6
+hpat1 654311 654319 AATG_2 8
hpat1 654346 654350 AC_2 4
hpat1 654350 654356 ATA_2 6
-hpat1 654375 654381 ATT_2 6
-hpat1 654381 654387 GTT_2 6
+hpat1 654362 654366 CT_2 4
+hpat1 654373 654379 TTA_2 6
+hpat1 654379 654385 TTG_2 6
hpat1 654401 654405 TG_2 4
hpat1 654415 654421 AT_3 6
hpat1 654435 654441 AG_3 6
+hpat1 654444 654448 GA_2 4
hpat1 654449 654453 AC_2 4
-hpat1 654467 654473 CTG_2 6
-hpat1 654473 654477 TG_2 4
-hpat1 654491 654501 ACCTC_2 10
+hpat1 654457 654461 GT_2 4
+hpat1 654466 654472 GCT_2 6
+hpat1 654472 654476 GT_2 4
+hpat1 654488 654494 ACC_2 6
+hpat1 654498 654504 CT_3 6
+hpat1 654518 654522 GA_2 4
hpat1 654532 654536 AC_2 4
+hpat1 654537 654541 AA_2 4
+hpat1 654584 654588 CT_2 4
+hpat1 654594 654598 AG_2 4
hpat1 654602 654606 TA_2 4
hpat1 654613 654617 GA_2 4
hpat1 654641 654645 GA_2 4
hpat1 654650 654654 CT_2 4
-hpat1 654669 654673 AG_2 4
+hpat1 654666 654670 CA_2 4
+hpat1 654670 654674 GA_2 4
hpat1 654693 654697 AG_2 4
+hpat1 654697 654701 AA_2 4
hpat1 654701 654705 GA_2 4
hpat1 654706 654710 TC_2 4
hpat1 654714 654718 GA_2 4
@@ -22953,97 +43728,177 @@
hpat1 654794 654800 TCC_2 6
hpat1 654810 654814 TG_2 4
hpat1 654818 654822 AG_2 4
+hpat1 654825 654829 CC_2 4
hpat1 654841 654845 AT_2 4
+hpat1 654845 654849 GG_2 4
+hpat1 654868 654872 GA_2 4
hpat1 654872 654876 TG_2 4
hpat1 654876 654880 CA_2 4
+hpat1 654902 654906 TT_2 4
+hpat1 654915 654919 AG_2 4
hpat1 654924 654928 AT_2 4
+hpat1 654954 654958 TT_2 4
+hpat1 654959 654963 AA_2 4
hpat1 654979 654985 GTG_2 6
hpat1 654999 655003 GA_2 4
+hpat1 655019 655023 CT_2 4
hpat1 655027 655031 AC_2 4
hpat1 655033 655037 TC_2 4
+hpat1 655051 655055 CC_2 4
+hpat1 655059 655063 GG_2 4
+hpat1 655068 655072 GG_2 4
hpat1 655074 655078 TG_2 4
hpat1 655085 655103 TACTGC_3 18
hpat1 655131 655135 TG_2 4
hpat1 655150 655154 TG_2 4
hpat1 655157 655161 AG_2 4
hpat1 655165 655171 AG_3 6
-hpat1 655174 655178 AG_2 4
+hpat1 655173 655177 GA_2 4
hpat1 655196 655200 GA_2 4
+hpat1 655204 655210 GGC_2 6
hpat1 655232 655236 TG_2 4
+hpat1 655236 655242 TT_3 6
+hpat1 655244 655248 AA_2 4
hpat1 655252 655258 AG_3 6
-hpat1 655280 655284 GA_2 4
+hpat1 655264 655268 GA_2 4
+hpat1 655274 655278 GG_2 4
+hpat1 655279 655283 AG_2 4
+hpat1 655297 655301 GG_2 4
+hpat1 655303 655307 GG_2 4
+hpat1 655323 655327 AC_2 4
hpat1 655340 655344 TG_2 4
hpat1 655344 655354 GTGGG_2 10
+hpat1 655355 655359 GG_2 4
+hpat1 655363 655367 GG_2 4
hpat1 655367 655373 TGG_2 6
+hpat1 655380 655384 GA_2 4
hpat1 655387 655393 TGT_2 6
+hpat1 655395 655399 AA_2 4
+hpat1 655408 655412 CT_2 4
+hpat1 655435 655441 TAA_2 6
hpat1 655466 655474 ACTT_2 8
+hpat1 655500 655504 TG_2 4
hpat1 655593 655597 CA_2 4
-hpat1 655607 655613 TCA_2 6
+hpat1 655605 655609 TC_2 4
+hpat1 655612 655616 AG_2 4
+hpat1 655625 655631 CCT_2 6
+hpat1 655631 655639 TTTC_2 8
+hpat1 655640 655646 TT_3 6
+hpat1 655664 655668 CC_2 4
hpat1 655670 655676 TC_3 6
+hpat1 655700 655704 TC_2 4
hpat1 655716 655728 AGCCTC_2 12
-hpat1 655731 655735 TC_2 4
+hpat1 655730 655736 CT_3 6
+hpat1 655741 655745 AA_2 4
+hpat1 655752 655756 AA_2 4
+hpat1 655761 655765 GG_2 4
hpat1 655767 655773 TGG_2 6
+hpat1 655773 655777 GG_2 4
+hpat1 655784 655788 CC_2 4
+hpat1 655788 655794 GGC_2 6
hpat1 655804 655810 GAG_2 6
+hpat1 655819 655825 CTG_2 6
+hpat1 655825 655831 GGT_2 6
+hpat1 655832 655836 GG_2 4
+hpat1 655838 655844 GGA_2 6
hpat1 655844 655850 GCT_2 6
hpat1 655857 655861 TA_2 4
hpat1 655864 655868 AG_2 4
hpat1 655871 655877 CTT_2 6
hpat1 655879 655883 TG_2 4
hpat1 655900 655904 GA_2 4
+hpat1 655911 655919 CCAG_2 8
hpat1 655941 655947 CAG_2 6
+hpat1 655958 655962 AA_2 4
+hpat1 655968 655972 TC_2 4
hpat1 655981 655985 CA_2 4
+hpat1 655997 656001 GG_2 4
+hpat1 656008 656020 CCTCCC_2 12
+hpat1 656021 656027 TTA_2 6
hpat1 656070 656074 AC_2 4
-hpat1 656079 656085 TCC_2 6
+hpat1 656077 656083 CCT_2 6
+hpat1 656115 656119 GG_2 4
hpat1 656119 656125 AGG_2 6
hpat1 656129 656133 TG_2 4
+hpat1 656145 656149 GG_2 4
hpat1 656151 656155 AG_2 4
+hpat1 656192 656196 GG_2 4
hpat1 656229 656235 GA_3 6
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hpat1 656253 656259 ACC_2 6
hpat1 656263 656267 TC_2 4
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hpat1 656299 656303 TG_2 4
hpat1 656313 656317 TG_2 4
hpat1 656333 656337 AG_2 4
hpat1 656337 656341 CT_2 4
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+hpat1 656368 656374 GG_3 6
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hpat1 656383 656387 GA_2 4
hpat1 656428 656432 AG_2 4
+hpat1 656435 656441 CCT_2 6
+hpat1 656449 656455 GG_3 6
hpat1 656457 656461 TC_2 4
-hpat1 656498 656502 TG_2 4
-hpat1 656544 656548 CT_2 4
-hpat1 656548 656554 GCC_2 6
-hpat1 656554 656562 TC_4 8
+hpat1 656489 656493 GA_2 4
+hpat1 656497 656503 GT_3 6
+hpat1 656503 656507 TG_2 4
+hpat1 656518 656522 CT_2 4
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+hpat1 656530 656536 CCT_2 6
+hpat1 656540 656550 TCTGC_2 10
+hpat1 656553 656563 CT_5 10
hpat1 656577 656581 AG_2 4
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hpat1 656612 656622 CTGGC_2 10
hpat1 656630 656640 CTTCA_2 10
-hpat1 656661 656665 GA_2 4
+hpat1 656640 656644 GG_2 4
+hpat1 656648 656652 CA_2 4
+hpat1 656660 656664 AG_2 4
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hpat1 656687 656693 TC_3 6
hpat1 656698 656702 AG_2 4
hpat1 656713 656717 TG_2 4
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hpat1 656732 656736 TG_2 4
-hpat1 656758 656762 TG_2 4
+hpat1 656757 656761 GT_2 4
hpat1 656781 656785 CT_2 4
hpat1 656785 656789 TG_2 4
-hpat1 656809 656813 TC_2 4
-hpat1 656813 656817 TG_2 4
+hpat1 656808 656814 CT_3 6
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hpat1 656849 656855 TCC_2 6
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hpat1 656881 656885 TG_2 4
-hpat1 656890 656894 GT_2 4
+hpat1 656889 656895 TG_3 6
hpat1 656898 656904 AG_3 6
hpat1 656915 656919 TG_2 4
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hpat1 656953 656959 CT_3 6
+hpat1 656962 656968 CCT_2 6
hpat1 656984 656988 GA_2 4
hpat1 656997 657001 GT_2 4
-hpat1 657005 657015 GCTCA_2 10
-hpat1 657030 657034 TC_2 4
+hpat1 657004 657014 AGCTC_2 10
+hpat1 657029 657033 CT_2 4
+hpat1 657038 657042 CC_2 4
hpat1 657049 657053 AG_2 4
+hpat1 657060 657064 GG_2 4
hpat1 657076 657080 AT_2 4
hpat1 657082 657086 CA_2 4
hpat1 657092 657098 TCA_2 6
-hpat1 657102 657106 AC_2 4
+hpat1 657101 657105 CA_2 4
hpat1 657127 657131 CA_2 4
-hpat1 657173 657177 GA_2 4
+hpat1 657134 657138 AT_2 4
+hpat1 657172 657176 AG_2 4
hpat1 657179 657183 AT_2 4
hpat1 657194 657198 AT_2 4
-hpat1 657225 657229 AG_2 4
+hpat1 657207 657211 AA_2 4
+hpat1 657220 657226 GGA_2 6
+hpat1 657228 657232 GG_2 4
hpat1 657237 657249 AGGCCA_2 12
hpat1 657249 657253 CA_2 4
hpat1 657284 657294 CAGCC_2 10
@@ -23051,77 +43906,144 @@
hpat1 657438 657442 TA_2 4
hpat1 657449 657453 AC_2 4
hpat1 657484 657488 TA_2 4
+hpat1 657508 657520 TTGGAC_2 12
+hpat1 657583 657587 CT_2 4
+hpat1 657609 657621 TGGACC_2 12
+hpat1 657642 657646 GG_2 4
hpat1 657651 657655 AG_2 4
-hpat1 657674 657680 TG_3 6
-hpat1 657703 657707 CT_2 4
-hpat1 657708 657716 TGCT_2 8
-hpat1 657748 657754 GCT_2 6
+hpat1 657670 657676 CTG_2 6
+hpat1 657676 657680 TG_2 4
+hpat1 657693 657697 CC_2 4
+hpat1 657702 657706 TC_2 4
+hpat1 657706 657710 TG_2 4
+hpat1 657714 657718 CT_2 4
+hpat1 657721 657725 AA_2 4
+hpat1 657729 657733 GG_2 4
+hpat1 657739 657743 TT_2 4
+hpat1 657747 657753 TGC_2 6
+hpat1 657754 657758 CC_2 4
hpat1 657758 657762 AG_2 4
-hpat1 657775 657779 TG_2 4
+hpat1 657774 657778 GT_2 4
hpat1 657786 657792 TG_3 6
+hpat1 657798 657802 GG_2 4
+hpat1 657811 657815 GG_2 4
hpat1 657853 657857 AG_2 4
hpat1 657862 657866 GA_2 4
+hpat1 657874 657878 GC_2 4
hpat1 657886 657890 TG_2 4
-hpat1 657922 657926 AG_2 4
+hpat1 657921 657925 GA_2 4
+hpat1 657941 657945 GG_2 4
hpat1 657963 657967 AG_2 4
hpat1 657977 657981 TG_2 4
hpat1 657983 657993 ATTGG_2 10
hpat1 658025 658029 CT_2 4
hpat1 658029 658033 GA_2 4
hpat1 658037 658043 AGG_2 6
+hpat1 658055 658059 GG_2 4
hpat1 658063 658067 AG_2 4
+hpat1 658070 658076 GG_3 6
+hpat1 658090 658094 GG_2 4
+hpat1 658108 658118 GGAGG_2 10
hpat1 658121 658125 AC_2 4
hpat1 658128 658134 AGA_2 6
-hpat1 658154 658158 AG_2 4
+hpat1 658145 658149 GG_2 4
+hpat1 658151 658155 CA_2 4
+hpat1 658155 658159 GA_2 4
hpat1 658166 658174 CATG_2 8
hpat1 658174 658182 TGGG_2 8
+hpat1 658186 658192 CTT_2 6
+hpat1 658193 658197 GG_2 4
hpat1 658202 658206 GA_2 4
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hpat1 658238 658242 TG_2 4
hpat1 658251 658257 TGG_2 6
hpat1 658277 658281 AG_2 4
-hpat1 658288 658294 ATG_2 6
+hpat1 658287 658293 GAT_2 6
hpat1 658304 658308 TC_2 4
hpat1 658324 658328 TG_2 4
+hpat1 658342 658346 GG_2 4
hpat1 658346 658352 AGA_2 6
-hpat1 658379 658383 GA_2 4
+hpat1 658352 658356 GG_2 4
+hpat1 658369 658375 GGA_2 6
+hpat1 658378 658384 AG_3 6
+hpat1 658397 658401 GG_2 4
hpat1 658437 658441 CT_2 4
hpat1 658443 658449 AG_3 6
+hpat1 658459 658465 TTC_2 6
+hpat1 658471 658475 GG_2 4
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hpat1 658499 658503 TG_2 4
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hpat1 658523 658527 CA_2 4
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hpat1 658563 658567 AG_2 4
+hpat1 658589 658595 AAG_2 6
hpat1 658605 658633 GT_14 28
hpat1 658633 658641 GC_4 8
hpat1 658645 658655 GT_5 10
-hpat1 658659 658665 AGG_2 6
+hpat1 658657 658666 GGA_3 9
hpat1 658673 658679 TCC_2 6
+hpat1 658685 658689 TC_2 4
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hpat1 658709 658713 AG_2 4
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hpat1 658720 658724 AC_2 4
hpat1 658724 658728 CT_2 4
-hpat1 658773 658777 CT_2 4
+hpat1 658735 658739 GG_2 4
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+hpat1 658783 658787 CA_2 4
hpat1 658789 658793 CA_2 4
+hpat1 658797 658801 CC_2 4
+hpat1 658804 658808 CC_2 4
+hpat1 658812 658816 CC_2 4
+hpat1 658828 658834 CC_3 6
+hpat1 658882 658888 AAG_2 6
hpat1 658895 658901 TAA_2 6
hpat1 658910 658914 TC_2 4
-hpat1 658936 658948 TCCC_3 12
-hpat1 658948 658954 TC_3 6
-hpat1 658960 658968 TCCC_2 8
-hpat1 658974 658980 CTC_2 6
-hpat1 658986 658990 TC_2 4
-hpat1 659008 659012 TC_2 4
+hpat1 658917 658921 CC_2 4
+hpat1 658927 658931 CC_2 4
+hpat1 658933 658949 CCCT_4 16
+hpat1 658949 658953 CT_2 4
+hpat1 658956 658968 TCCC_3 12
+hpat1 658973 658977 TC_2 4
+hpat1 658977 658985 CTCC_2 8
+hpat1 658985 658989 CT_2 4
+hpat1 658998 659004 CC_3 6
+hpat1 659004 659010 CTC_2 6
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hpat1 659031 659035 CA_2 4
hpat1 659038 659044 AC_3 6
hpat1 659047 659055 GA_4 8
+hpat1 659055 659059 AA_2 4
+hpat1 659073 659077 TT_2 4
hpat1 659078 659082 CA_2 4
hpat1 659116 659120 AG_2 4
+hpat1 659122 659126 GA_2 4
+hpat1 659133 659139 CCA_2 6
+hpat1 659144 659150 CGG_2 6
hpat1 659151 659155 CT_2 4
hpat1 659155 659161 CAG_2 6
-hpat1 659220 659224 AC_2 4
+hpat1 659162 659166 CC_2 4
+hpat1 659219 659223 CA_2 4
+hpat1 659223 659227 CC_2 4
hpat1 659227 659235 AGGG_2 8
+hpat1 659236 659240 AG_2 4
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+hpat1 659247 659251 AA_2 4
hpat1 659296 659300 TC_2 4
hpat1 659322 659326 AC_2 4
+hpat1 659335 659345 GGCCA_2 10
+hpat1 659364 659368 GG_2 4
hpat1 659376 659380 AG_2 4
+hpat1 659392 659396 AA_2 4
+hpat1 659495 659499 CC_2 4
hpat1 659499 659503 TG_2 4
hpat1 659509 659513 TC_2 4
hpat1 659541 659545 CA_2 4
+hpat1 659591 659595 AA_2 4
hpat1 659595 659599 CT_2 4
hpat1 659603 659609 CTG_2 6
hpat1 659624 659628 AG_2 4
@@ -23131,143 +44053,271 @@
hpat1 659672 659676 AG_2 4
hpat1 659716 659720 CA_2 4
hpat1 659734 659738 GA_2 4
+hpat1 659759 659763 CC_2 4
+hpat1 659765 659769 GG_2 4
+hpat1 659771 659775 GG_2 4
hpat1 659783 659787 AG_2 4
-hpat1 659836 659842 TGG_2 6
+hpat1 659798 659802 GT_2 4
+hpat1 659817 659821 CT_2 4
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+hpat1 659832 659838 CTG_2 6
hpat1 659842 659846 CT_2 4
+hpat1 659876 659880 GG_2 4
+hpat1 659893 659901 TT_4 8
hpat1 659911 659921 CAAGG_2 10
-hpat1 659925 659929 CT_2 4
+hpat1 659924 659928 TC_2 4
+hpat1 659931 659939 CCTC_2 8
+hpat1 659957 659961 TT_2 4
hpat1 659964 659968 TG_2 4
-hpat1 659979 659983 CT_2 4
-hpat1 659989 659993 CT_2 4
+hpat1 659978 659982 TC_2 4
+hpat1 659988 659992 TC_2 4
+hpat1 660012 660016 GG_2 4
+hpat1 660027 660031 GG_2 4
+hpat1 660036 660040 GG_2 4
hpat1 660050 660054 AG_2 4
-hpat1 660058 660062 GT_2 4
+hpat1 660057 660061 TG_2 4
hpat1 660064 660068 GT_2 4
-hpat1 660079 660083 GA_2 4
+hpat1 660078 660082 AG_2 4
hpat1 660086 660090 AT_2 4
hpat1 660103 660107 AT_2 4
hpat1 660128 660132 GC_2 4
hpat1 660132 660136 AC_2 4
hpat1 660136 660140 TC_2 4
+hpat1 660154 660158 CC_2 4
+hpat1 660167 660171 CT_2 4
+hpat1 660229 660233 AG_2 4
hpat1 660237 660241 TG_2 4
+hpat1 660247 660251 AA_2 4
hpat1 660273 660277 TG_2 4
hpat1 660280 660284 AG_2 4
hpat1 660284 660288 GA_2 4
+hpat1 660289 660293 GG_2 4
+hpat1 660309 660313 GG_2 4
+hpat1 660328 660332 GG_2 4
hpat1 660353 660357 CT_2 4
hpat1 660361 660367 CTT_2 6
+hpat1 660373 660379 TGA_2 6
hpat1 660382 660386 CA_2 4
hpat1 660403 660417 CT_7 14
-hpat1 660423 660427 TG_2 4
+hpat1 660422 660426 GT_2 4
hpat1 660429 660433 AG_2 4
hpat1 660441 660445 TG_2 4
hpat1 660466 660470 AG_2 4
+hpat1 660477 660481 CC_2 4
hpat1 660483 660489 TCC_2 6
hpat1 660508 660512 TC_2 4
-hpat1 660543 660549 CTC_2 6
-hpat1 660549 660553 TC_2 4
+hpat1 660516 660522 CC_3 6
+hpat1 660534 660542 CTTT_2 8
+hpat1 660542 660546 TC_2 4
+hpat1 660546 660552 CT_3 6
hpat1 660555 660559 TC_2 4
-hpat1 660566 660578 CT_6 12
+hpat1 660560 660564 CT_2 4
+hpat1 660565 660577 TC_6 12
+hpat1 660580 660584 CC_2 4
+hpat1 660585 660589 CC_2 4
hpat1 660591 660621 TC_15 30
hpat1 660621 660647 AC_13 26
+hpat1 660660 660664 CA_2 4
hpat1 660664 660668 TG_2 4
hpat1 660676 660682 TC_3 6
hpat1 660694 660698 AC_2 4
hpat1 660698 660704 CTC_2 6
hpat1 660709 660713 AC_2 4
hpat1 660719 660725 TGG_2 6
+hpat1 660734 660738 GG_2 4
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hpat1 660787 660791 TC_2 4
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hpat1 660809 660813 AG_2 4
-hpat1 660841 660845 CT_2 4
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hpat1 660882 660886 GA_2 4
hpat1 660886 660890 AG_2 4
hpat1 660895 660927 GT_16 32
hpat1 660930 660936 GAG_2 6
+hpat1 660936 660940 GG_2 4
hpat1 660945 660951 GAG_2 6
hpat1 660951 660957 CAG_2 6
+hpat1 660957 660965 GGTT_2 8
+hpat1 660970 660974 GG_2 4
hpat1 660977 660981 GA_2 4
hpat1 660984 660996 TGGGGA_2 12
-hpat1 661052 661056 TC_2 4
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hpat1 661097 661101 TG_2 4
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hpat1 661125 661131 GA_3 6
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hpat1 661139 661143 GA_2 4
-hpat1 661149 661153 GT_2 4
-hpat1 661182 661190 AGGG_2 8
+hpat1 661148 661154 TG_3 6
+hpat1 661163 661167 GG_2 4
+hpat1 661178 661190 AGGG_3 12
+hpat1 661192 661196 CC_2 4
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hpat1 661222 661228 TC_3 6
hpat1 661248 661252 CT_2 4
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hpat1 661272 661280 CAGC_2 8
-hpat1 661282 661286 CT_2 4
-hpat1 661299 661303 AG_2 4
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hpat1 661337 661341 GC_2 4
hpat1 661353 661359 AGC_2 6
hpat1 661365 661369 TG_2 4
-hpat1 661371 661375 CT_2 4
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hpat1 661388 661392 CT_2 4
-hpat1 661432 661436 CG_2 4
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+hpat1 661519 661525 GGA_2 6
hpat1 661535 661541 AG_3 6
hpat1 661542 661546 TC_2 4
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hpat1 661568 661572 CG_2 4
-hpat1 661618 661624 TCT_2 6
+hpat1 661572 661576 CC_2 4
+hpat1 661593 661597 GG_2 4
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+hpat1 661629 661635 CC_3 6
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hpat1 661702 661706 TC_2 4
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hpat1 661762 661768 TCT_2 6
hpat1 661773 661781 AGGA_2 8
hpat1 661781 661785 GC_2 4
-hpat1 661792 661796 CG_2 4
-hpat1 661801 661805 CG_2 4
-hpat1 661823 661831 CGGC_2 8
-hpat1 661835 661839 CG_2 4
+hpat1 661791 661795 GC_2 4
+hpat1 661800 661804 GC_2 4
+hpat1 661804 661808 GG_2 4
+hpat1 661816 661820 GG_2 4
+hpat1 661821 661827 GGC_2 6
+hpat1 661834 661838 GC_2 4
hpat1 661845 661849 TG_2 4
-hpat1 661852 661856 GC_2 4
+hpat1 661851 661857 CG_3 6
+hpat1 661859 661863 TT_2 4
hpat1 661892 661896 GC_2 4
-hpat1 661925 661931 CGG_2 6
-hpat1 661937 661949 CTCGGG_2 12
-hpat1 661954 661963 CGG_3 9
-hpat1 661963 661967 CG_2 4
+hpat1 661923 661932 GGC_3 9
+hpat1 661935 661947 GGCTCG_2 12
+hpat1 661952 661964 GGC_4 12
+hpat1 661964 661968 GC_2 4
+hpat1 661973 661977 GG_2 4
hpat1 661979 661983 CG_2 4
hpat1 661989 661993 GC_2 4
-hpat1 662016 662020 AT_2 4
-hpat1 662071 662075 CT_2 4
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hpat1 662109 662113 CA_2 4
-hpat1 662129 662135 CGG_2 6
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+hpat1 662126 662135 CGG_3 9
+hpat1 662136 662140 GG_2 4
hpat1 662151 662159 GCAG_2 8
+hpat1 662161 662165 GG_2 4
hpat1 662178 662182 GA_2 4
-hpat1 662188 662200 CAGAGA_2 12
+hpat1 662185 662189 GC_2 4
+hpat1 662189 662193 AG_2 4
+hpat1 662195 662201 AG_3 6
+hpat1 662206 662210 GA_2 4
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+hpat1 662228 662232 GG_2 4
hpat1 662232 662241 AGA_3 9
hpat1 662241 662245 GA_2 4
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hpat1 662258 662262 AG_2 4
-hpat1 662275 662281 GA_3 6
+hpat1 662274 662280 AG_3 6
hpat1 662283 662287 CA_2 4
hpat1 662291 662297 GA_3 6
hpat1 662312 662318 AG_3 6
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hpat1 662338 662342 AC_2 4
-hpat1 662344 662350 GA_3 6
+hpat1 662343 662349 AG_3 6
hpat1 662353 662361 AG_4 8
+hpat1 662361 662369 AAGA_2 8
hpat1 662370 662374 AG_2 4
-hpat1 662378 662382 AG_2 4
-hpat1 662391 662401 CA_5 10
-hpat1 662416 662420 GA_2 4
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+hpat1 662407 662413 GGA_2 6
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hpat1 662428 662434 CA_3 6
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+hpat1 662458 662466 AAAG_2 8
+hpat1 662467 662475 GAAA_2 8
+hpat1 662480 662484 AA_2 4
hpat1 662484 662488 GA_2 4
+hpat1 662488 662492 GG_2 4
+hpat1 662500 662504 GG_2 4
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hpat1 662542 662546 CA_2 4
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hpat1 662569 662573 AG_2 4
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hpat1 662581 662585 GC_2 4
-hpat1 662618 662622 TC_2 4
-hpat1 662624 662628 TC_2 4
+hpat1 662616 662628 CCTCTC_2 12
+hpat1 662628 662632 CC_2 4
hpat1 662670 662674 AG_2 4
hpat1 662678 662682 TC_2 4
-hpat1 662740 662746 CTT_2 6
+hpat1 662686 662692 CC_3 6
+hpat1 662712 662716 CC_2 4
+hpat1 662727 662731 GG_2 4
+hpat1 662738 662747 TTC_3 9
hpat1 662753 662759 TGG_2 6
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+hpat1 662825 662833 GGCG_2 8
+hpat1 662838 662842 AG_2 4
+hpat1 662848 662852 AA_2 4
hpat1 662860 662868 TAAT_2 8
-hpat1 662873 662879 TGC_2 6
+hpat1 662872 662878 CTG_2 6
+hpat1 662880 662886 GG_3 6
hpat1 662886 662892 TGG_2 6
+hpat1 662892 662896 TT_2 4
hpat1 662897 662901 AC_2 4
hpat1 662911 662915 GT_2 4
+hpat1 662928 662932 GG_2 4
hpat1 662942 662946 AG_2 4
hpat1 662946 662950 AC_2 4
-hpat1 662965 662969 AG_2 4
+hpat1 662964 662968 GA_2 4
+hpat1 662968 662974 GG_3 6
+hpat1 662975 662983 AGGG_2 8
+hpat1 662988 662992 GG_2 4
+hpat1 662995 663001 CTG_2 6
hpat1 663004 663008 CT_2 4
hpat1 663027 663031 TC_2 4
+hpat1 663032 663036 AA_2 4
+hpat1 663056 663060 CC_2 4
+hpat1 663077 663081 GG_2 4
+hpat1 663084 663088 CC_2 4
hpat1 663089 663093 AT_2 4
-hpat1 663115 663119 AG_2 4
+hpat1 663114 663118 GA_2 4
+hpat1 663124 663128 CC_2 4
hpat1 663134 663138 AG_2 4
+hpat1 663152 663156 CC_2 4
hpat1 663157 663163 TGG_2 6
hpat1 663180 663184 GT_2 4
hpat1 663197 663201 CA_2 4
@@ -23276,998 +44326,1830 @@
hpat1 663234 663238 CT_2 4
hpat1 663262 663266 GA_2 4
hpat1 663274 663280 TGG_2 6
+hpat1 663283 663287 GG_2 4
+hpat1 663293 663297 TT_2 4
hpat1 663337 663343 AG_3 6
hpat1 663375 663381 CAG_2 6
hpat1 663389 663393 AG_2 4
+hpat1 663404 663408 CT_2 4
hpat1 663411 663417 CAC_2 6
+hpat1 663445 663449 GT_2 4
hpat1 663459 663463 TC_2 4
+hpat1 663468 663472 AA_2 4
+hpat1 663474 663478 GG_2 4
+hpat1 663478 663482 CC_2 4
hpat1 663484 663490 GTG_2 6
+hpat1 663512 663516 TT_2 4
hpat1 663529 663535 AGG_2 6
hpat1 663556 663560 GA_2 4
hpat1 663579 663583 GA_2 4
hpat1 663588 663592 TC_2 4
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hpat1 686842 686846 AG_2 4
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hpat1 686898 686910 CAGCCT_2 12
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hpat1 687284 687293 AGG_3 9
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hpat1 687550 687554 CT_2 4
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hpat1 687578 687582 CT_2 4
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hpat1 689020 689036 TAAA_4 16
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hpat1 690038 690044 ATC_2 6
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hpat1 690158 690166 GCAG_2 8
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hpat1 690323 690327 CT_2 4
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hpat1 690878 690884 GTA_2 6
hpat1 690893 690897 CA_2 4
hpat1 690908 690916 CTTG_2 8
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hpat1 691120 691124 TG_2 4
hpat1 691124 691128 GT_2 4
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hpat1 691151 691157 TGA_2 6
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hpat1 691175 691179 AG_2 4
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hpat1 691196 691200 CT_2 4
hpat1 691201 691209 TGCC_2 8
hpat1 691213 691217 TC_2 4
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hpat1 691321 691325 CT_2 4
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hpat1 691456 691460 TC_2 4
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hpat1 691543 691547 TG_2 4
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hpat1 691580 691584 TG_2 4
hpat1 691597 691601 AT_2 4
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hpat1 691636 691640 CT_2 4
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hpat1 691732 691736 AG_2 4
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hpat1 691755 691761 AG_3 6
hpat1 691775 691781 AG_3 6
hpat1 691802 691806 TA_2 4
@@ -24283,333 +46165,670 @@
hpat1 691938 691942 GA_2 4
hpat1 691942 691946 AC_2 4
hpat1 691946 691952 AGC_2 6
-hpat1 691955 691959 CA_2 4
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hpat1 691963 691967 AC_2 4
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hpat1 691980 691984 TG_2 4
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hpat1 692046 692052 GCA_2 6
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hpat1 692107 692111 TA_2 4
hpat1 692111 692119 AGAC_2 8
hpat1 692129 692133 CT_2 4
hpat1 692141 692145 GA_2 4
hpat1 692145 692149 AT_2 4
hpat1 692150 692154 GT_2 4
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hpat1 692172 692178 GA_3 6
hpat1 692178 692182 CA_2 4
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hpat1 692215 692219 GA_2 4
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hpat1 692240 692246 AG_3 6
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hpat1 692314 692318 CT_2 4
hpat1 692324 692328 GA_2 4
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hpat1 692354 692358 GT_2 4
hpat1 692402 692406 AG_2 4
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hpat1 692425 692431 AG_3 6
hpat1 692456 692460 GA_2 4
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hpat1 692499 692503 AG_2 4
hpat1 692515 692519 AC_2 4
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hpat1 692561 692569 TGGG_2 8
hpat1 692578 692584 GTC_2 6
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hpat1 692657 692661 TC_2 4
hpat1 692664 692668 AG_2 4
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hpat1 692703 692707 CT_2 4
hpat1 692707 692713 GTG_2 6
hpat1 692723 692727 CA_2 4
hpat1 692729 692737 CAGG_2 8
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hpat1 692757 692761 CA_2 4
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hpat1 699371 699375 TC_2 4
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hpat1 699507 699511 CT_2 4
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hpat1 699528 699532 AT_2 4
hpat1 699543 699549 CTC_2 6
hpat1 699551 699555 GT_2 4
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hpat1 699605 699609 AC_2 4
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hpat1 699702 699706 TC_2 4
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hpat1 699745 699749 TG_2 4
hpat1 699776 699782 ATC_2 6
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hpat1 699841 699847 TCT_2 6
hpat1 699851 699855 TA_2 4
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hpat1 699885 699891 CTC_2 6
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hpat1 699939 699949 TGTTT_2 10
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hpat1 699997 700001 CA_2 4
hpat1 700060 700064 GA_2 4
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hpat1 700091 700095 TC_2 4
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hpat1 700123 700129 TGG_2 6
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hpat1 700224 700228 AC_2 4
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hpat1 700276 700280 TA_2 4
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hpat1 700307 700316 TGT_3 9
hpat1 700316 700328 CATA_3 12
hpat1 700328 700334 TG_3 6
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hpat1 700413 700419 AT_3 6
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hpat1 700522 700528 CTT_2 6
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hpat1 700609 700613 AT_2 4
hpat1 700623 700627 TA_2 4
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hpat1 700670 700676 TGT_2 6
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hpat1 700823 700829 TGG_2 6
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hpat1 700869 700875 CTT_2 6
hpat1 700880 700884 TG_2 4
-hpat1 700896 700900 AT_2 4
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hpat1 700903 700907 AT_2 4
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hpat1 700960 700964 AC_2 4
hpat1 700964 700970 AT_3 6
hpat1 700974 700980 CTT_2 6
hpat1 700983 700989 GTT_2 6
hpat1 701004 701008 CT_2 4
-hpat1 701022 701030 CTTT_2 8
+hpat1 701011 701017 TT_3 6
+hpat1 701020 701028 TTCT_2 8
+hpat1 701028 701032 TT_2 4
hpat1 701032 701036 CT_2 4
diff -r ee773bbde3c3 -r 264d79548d19 test-data/dibed_sample
--- a/test-data/dibed_sample Wed Jul 17 05:08:00 2024 +0000
+++ b/test-data/dibed_sample Wed Jul 17 06:08:33 2024 +0000
@@ -1,207 +1,223 @@
-hpat1 661 665 GC_2 4
-hpat1 801 805 GC_2 4
hpat1 3876 3880 GC_2 4
hpat1 3950 3954 GC_2 4
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hpat1 4906 4910 GC_2 4
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hpat1 6138 6142 GC_2 4
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hpat1 10030 10034 GC_2 4
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hpat1 14018 14022 GC_2 4
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hpat1 14360 14364 GC_2 4
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hpat1 18384 18388 GC_2 4
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hpat1 19256 19260 GC_2 4
hpat1 19478 19482 GC_2 4
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hpat1 22716 22722 GC_3 6
hpat1 22810 22814 GC_2 4
hpat1 24720 24724 GC_2 4
hpat1 25218 25222 GC_2 4
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hpat1 34462 34466 GC_2 4
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hpat1 61686 61690 GC_2 4
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hpat1 98322 98326 GC_2 4
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hpat1 115153 115157 GC_2 4
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hpat1 121409 121413 GC_2 4
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hpat1 164335 164339 GC_2 4
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hpat1 174993 174997 GC_2 4
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hpat1 185962 185966 GC_2 4
hpat1 195547 195551 GC_2 4
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hpat1 199005 199009 GC_2 4
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hpat1 276225 276229 GC_2 4
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hpat1 287915 287919 GC_2 4
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hpat1 384003 384007 GC_2 4
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hpat1 385553 385557 GC_2 4
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hpat1 394044 394048 GC_2 4
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hpat1 399726 399730 GC_2 4
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hpat1 401832 401836 GC_2 4
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hpat1 404534 404538 GC_2 4
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hpat1 407328 407332 GC_2 4
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hpat1 411224 411228 GC_2 4
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hpat1 415049 415053 GC_2 4
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hpat1 420803 420807 GC_2 4
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hpat1 421015 421025 GC_5 10
hpat1 421689 421693 GC_2 4
hpat1 426529 426533 GC_2 4
@@ -209,87 +225,97 @@
hpat1 427575 427579 GC_2 4
hpat1 428045 428049 GC_2 4
hpat1 428469 428473 GC_2 4
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@@ -297,75 +323,78 @@
hpat1 595879 595885 GC_3 6
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