# HG changeset patch
# User fubar
# Date 1690515866 0
# Node ID 449c918bc4cdaa5c577de8457236c4e106bc6544
# Parent 7c166107a2e23cde30ce9761db7d48a166fcfe39
Uploaded
diff -r 7c166107a2e2 -r 449c918bc4cd plotly_tabular_tool/README.md
--- a/plotly_tabular_tool/README.md Thu Jul 27 22:50:49 2023 +0000
+++ b/plotly_tabular_tool/README.md Fri Jul 28 03:44:26 2023 +0000
@@ -1,10 +1,7 @@
# plotly_tabular_tool
-Galaxy tool to create plotly plots from user selected columns of any Galaxy tabular data
-
-A tailored version for blast outputs is described at https://lazarus.name/demo/
-
-Same code really, but with a default header and transformation of the evalue column -log10(x) to make them more like the bitscore
+Galaxy tool to create plotly plots from user selected columns of any Galaxy tabular data.
+Example interactive plots at https://lazarus.name/demo/
Plotly.express makes a lot of clever design decisions.
Unfortunately, it gets totally confused with evalue columns because it thinks scientific notation like 5.00e-204 is a string or something.
@@ -12,3 +9,6 @@
Note that all columns used for colour (legend) and the x/y axis tickmarks are truncated because they can squish up the plot.
.. is added at the end to show truncation.
+A specialised version for 25 column Galaxy blastn search outputs is also available. It uses this code mostly, but adds a default header and auto-transformation of the evalue column -log10(x) to make them more like the bitscore
+
+
diff -r 7c166107a2e2 -r 449c918bc4cd plotly_tabular_tool/iris.xls
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/plotly_tabular_tool/iris.xls Fri Jul 28 03:44:26 2023 +0000
@@ -0,0 +1,151 @@
+ sepal_length sepal_width petal_length petal_width species species_id
+0 5.1 3.5 1.4 0.2 setosa 1
+1 4.9 3.0 1.4 0.2 setosa 1
+2 4.7 3.2 1.3 0.2 setosa 1
+3 4.6 3.1 1.5 0.2 setosa 1
+4 5.0 3.6 1.4 0.2 setosa 1
+5 5.4 3.9 1.7 0.4 setosa 1
+6 4.6 3.4 1.4 0.3 setosa 1
+7 5.0 3.4 1.5 0.2 setosa 1
+8 4.4 2.9 1.4 0.2 setosa 1
+9 4.9 3.1 1.5 0.1 setosa 1
+10 5.4 3.7 1.5 0.2 setosa 1
+11 4.8 3.4 1.6 0.2 setosa 1
+12 4.8 3.0 1.4 0.1 setosa 1
+13 4.3 3.0 1.1 0.1 setosa 1
+14 5.8 4.0 1.2 0.2 setosa 1
+15 5.7 4.4 1.5 0.4 setosa 1
+16 5.4 3.9 1.3 0.4 setosa 1
+17 5.1 3.5 1.4 0.3 setosa 1
+18 5.7 3.8 1.7 0.3 setosa 1
+19 5.1 3.8 1.5 0.3 setosa 1
+20 5.4 3.4 1.7 0.2 setosa 1
+21 5.1 3.7 1.5 0.4 setosa 1
+22 4.6 3.6 1.0 0.2 setosa 1
+23 5.1 3.3 1.7 0.5 setosa 1
+24 4.8 3.4 1.9 0.2 setosa 1
+25 5.0 3.0 1.6 0.2 setosa 1
+26 5.0 3.4 1.6 0.4 setosa 1
+27 5.2 3.5 1.5 0.2 setosa 1
+28 5.2 3.4 1.4 0.2 setosa 1
+29 4.7 3.2 1.6 0.2 setosa 1
+30 4.8 3.1 1.6 0.2 setosa 1
+31 5.4 3.4 1.5 0.4 setosa 1
+32 5.2 4.1 1.5 0.1 setosa 1
+33 5.5 4.2 1.4 0.2 setosa 1
+34 4.9 3.1 1.5 0.1 setosa 1
+35 5.0 3.2 1.2 0.2 setosa 1
+36 5.5 3.5 1.3 0.2 setosa 1
+37 4.9 3.1 1.5 0.1 setosa 1
+38 4.4 3.0 1.3 0.2 setosa 1
+39 5.1 3.4 1.5 0.2 setosa 1
+40 5.0 3.5 1.3 0.3 setosa 1
+41 4.5 2.3 1.3 0.3 setosa 1
+42 4.4 3.2 1.3 0.2 setosa 1
+43 5.0 3.5 1.6 0.6 setosa 1
+44 5.1 3.8 1.9 0.4 setosa 1
+45 4.8 3.0 1.4 0.3 setosa 1
+46 5.1 3.8 1.6 0.2 setosa 1
+47 4.6 3.2 1.4 0.2 setosa 1
+48 5.3 3.7 1.5 0.2 setosa 1
+49 5.0 3.3 1.4 0.2 setosa 1
+50 7.0 3.2 4.7 1.4 versicolor 2
+51 6.4 3.2 4.5 1.5 versicolor 2
+52 6.9 3.1 4.9 1.5 versicolor 2
+53 5.5 2.3 4.0 1.3 versicolor 2
+54 6.5 2.8 4.6 1.5 versicolor 2
+55 5.7 2.8 4.5 1.3 versicolor 2
+56 6.3 3.3 4.7 1.6 versicolor 2
+57 4.9 2.4 3.3 1.0 versicolor 2
+58 6.6 2.9 4.6 1.3 versicolor 2
+59 5.2 2.7 3.9 1.4 versicolor 2
+60 5.0 2.0 3.5 1.0 versicolor 2
+61 5.9 3.0 4.2 1.5 versicolor 2
+62 6.0 2.2 4.0 1.0 versicolor 2
+63 6.1 2.9 4.7 1.4 versicolor 2
+64 5.6 2.9 3.6 1.3 versicolor 2
+65 6.7 3.1 4.4 1.4 versicolor 2
+66 5.6 3.0 4.5 1.5 versicolor 2
+67 5.8 2.7 4.1 1.0 versicolor 2
+68 6.2 2.2 4.5 1.5 versicolor 2
+69 5.6 2.5 3.9 1.1 versicolor 2
+70 5.9 3.2 4.8 1.8 versicolor 2
+71 6.1 2.8 4.0 1.3 versicolor 2
+72 6.3 2.5 4.9 1.5 versicolor 2
+73 6.1 2.8 4.7 1.2 versicolor 2
+74 6.4 2.9 4.3 1.3 versicolor 2
+75 6.6 3.0 4.4 1.4 versicolor 2
+76 6.8 2.8 4.8 1.4 versicolor 2
+77 6.7 3.0 5.0 1.7 versicolor 2
+78 6.0 2.9 4.5 1.5 versicolor 2
+79 5.7 2.6 3.5 1.0 versicolor 2
+80 5.5 2.4 3.8 1.1 versicolor 2
+81 5.5 2.4 3.7 1.0 versicolor 2
+82 5.8 2.7 3.9 1.2 versicolor 2
+83 6.0 2.7 5.1 1.6 versicolor 2
+84 5.4 3.0 4.5 1.5 versicolor 2
+85 6.0 3.4 4.5 1.6 versicolor 2
+86 6.7 3.1 4.7 1.5 versicolor 2
+87 6.3 2.3 4.4 1.3 versicolor 2
+88 5.6 3.0 4.1 1.3 versicolor 2
+89 5.5 2.5 4.0 1.3 versicolor 2
+90 5.5 2.6 4.4 1.2 versicolor 2
+91 6.1 3.0 4.6 1.4 versicolor 2
+92 5.8 2.6 4.0 1.2 versicolor 2
+93 5.0 2.3 3.3 1.0 versicolor 2
+94 5.6 2.7 4.2 1.3 versicolor 2
+95 5.7 3.0 4.2 1.2 versicolor 2
+96 5.7 2.9 4.2 1.3 versicolor 2
+97 6.2 2.9 4.3 1.3 versicolor 2
+98 5.1 2.5 3.0 1.1 versicolor 2
+99 5.7 2.8 4.1 1.3 versicolor 2
+100 6.3 3.3 6.0 2.5 virginica 3
+101 5.8 2.7 5.1 1.9 virginica 3
+102 7.1 3.0 5.9 2.1 virginica 3
+103 6.3 2.9 5.6 1.8 virginica 3
+104 6.5 3.0 5.8 2.2 virginica 3
+105 7.6 3.0 6.6 2.1 virginica 3
+106 4.9 2.5 4.5 1.7 virginica 3
+107 7.3 2.9 6.3 1.8 virginica 3
+108 6.7 2.5 5.8 1.8 virginica 3
+109 7.2 3.6 6.1 2.5 virginica 3
+110 6.5 3.2 5.1 2.0 virginica 3
+111 6.4 2.7 5.3 1.9 virginica 3
+112 6.8 3.0 5.5 2.1 virginica 3
+113 5.7 2.5 5.0 2.0 virginica 3
+114 5.8 2.8 5.1 2.4 virginica 3
+115 6.4 3.2 5.3 2.3 virginica 3
+116 6.5 3.0 5.5 1.8 virginica 3
+117 7.7 3.8 6.7 2.2 virginica 3
+118 7.7 2.6 6.9 2.3 virginica 3
+119 6.0 2.2 5.0 1.5 virginica 3
+120 6.9 3.2 5.7 2.3 virginica 3
+121 5.6 2.8 4.9 2.0 virginica 3
+122 7.7 2.8 6.7 2.0 virginica 3
+123 6.3 2.7 4.9 1.8 virginica 3
+124 6.7 3.3 5.7 2.1 virginica 3
+125 7.2 3.2 6.0 1.8 virginica 3
+126 6.2 2.8 4.8 1.8 virginica 3
+127 6.1 3.0 4.9 1.8 virginica 3
+128 6.4 2.8 5.6 2.1 virginica 3
+129 7.2 3.0 5.8 1.6 virginica 3
+130 7.4 2.8 6.1 1.9 virginica 3
+131 7.9 3.8 6.4 2.0 virginica 3
+132 6.4 2.8 5.6 2.2 virginica 3
+133 6.3 2.8 5.1 1.5 virginica 3
+134 6.1 2.6 5.6 1.4 virginica 3
+135 7.7 3.0 6.1 2.3 virginica 3
+136 6.3 3.4 5.6 2.4 virginica 3
+137 6.4 3.1 5.5 1.8 virginica 3
+138 6.0 3.0 4.8 1.8 virginica 3
+139 6.9 3.1 5.4 2.1 virginica 3
+140 6.7 3.1 5.6 2.4 virginica 3
+141 6.9 3.1 5.1 2.3 virginica 3
+142 5.8 2.7 5.1 1.9 virginica 3
+143 6.8 3.2 5.9 2.3 virginica 3
+144 6.7 3.3 5.7 2.5 virginica 3
+145 6.7 3.0 5.2 2.3 virginica 3
+146 6.3 2.5 5.0 1.9 virginica 3
+147 6.5 3.0 5.2 2.0 virginica 3
+148 6.2 3.4 5.4 2.3 virginica 3
+149 5.9 3.0 5.1 1.8 virginica 3
diff -r 7c166107a2e2 -r 449c918bc4cd plotly_tabular_tool/plotly_tabular_iris.html
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/plotly_tabular_tool/plotly_tabular_iris.html Fri Jul 28 03:44:26 2023 +0000
@@ -0,0 +1,14 @@
+
+
+
+
+
+
\ No newline at end of file
diff -r 7c166107a2e2 -r 449c918bc4cd plotly_tabular_tool/plotlytabular.xml
--- a/plotly_tabular_tool/plotlytabular.xml Thu Jul 27 22:50:49 2023 +0000
+++ b/plotly_tabular_tool/plotlytabular.xml Fri Jul 28 03:44:26 2023 +0000
@@ -1,6 +1,6 @@
-
+
Plotly plot generator
pandas
@@ -49,10 +49,17 @@
a('--hovercol',default='')
a('--title',default='Default plot title')
args = parser.parse_args()
+isColour = False
+isHover = False
+if len(args.colourcol.strip()) > 0:
+ isColour = True
+if len(args.hovercol.strip()) > 0:
+ isHover = True
df = pd.read_csv(args.input_tab, sep='\t')
MAXLEN=35
NCOLS = df.columns.size
defaultcols = ['col%d' % (x+1) for x in range(NCOLS)]
+testcols = df.columns
if len(args.header.strip()) > 0:
newcols = args.header.split(',')
if len(newcols) == NCOLS:
@@ -60,15 +67,12 @@
else:
sys.stderr.write('#### Supplied header %s has %d comma delimited header names - does not match the input tabular file %d columns - using col1,...coln' % (args.header, len(newcols), NCOLS))
df.columns = defaultcols
-else:
- df.columns = defaultcols
+else: # no header supplied - check for a real one that matches the x and y axis column names
+ colsok = (args.xcol in testcols) and (args.ycol in testcols) # if they match, probably ok...should use more code and logic..
+ if not colsok:
+ sys.stderr.write('replacing supplied header %s over existing %s' % (testcols, defaultcols))
+ df.columns = defaultcols
#df['col11'] = [-math.log(x) for x in df['col11']] # convert so large values reflect statistical surprise
-isColour = False
-isHover = False
-if len(args.colourcol.strip()) > 0:
- isColour = True
-if len(args.hovercol.strip()) > 0:
- isHover = True
if isHover and isColour:
fig = px.scatter(df, x=args.xcol, y=args.ycol, color=args.colourcol, hover_name=args.hovercol)
elif isHover:
@@ -94,11 +98,11 @@
-
-
-
-
-
+
+
+
+
+
@@ -108,11 +112,11 @@
-
-
-
-
-
+
+
+
+
+
@@ -197,10 +201,17 @@
a('--hovercol',default='')
a('--title',default='Default plot title')
args = parser.parse_args()
+ isColour = False
+ isHover = False
+ if len(args.colourcol.strip()) > 0:
+ isColour = True
+ if len(args.hovercol.strip()) > 0:
+ isHover = True
df = pd.read_csv(args.input_tab, sep='\t')
MAXLEN=35
NCOLS = df.columns.size
defaultcols = ['col%d' % (x+1) for x in range(NCOLS)]
+ testcols = df.columns
if len(args.header.strip()) > 0:
newcols = args.header.split(',')
if len(newcols) == NCOLS:
@@ -208,15 +219,12 @@
else:
sys.stderr.write('#### Supplied header %s has %d comma delimited header names - does not match the input tabular file %d columns - using col1,...coln' % (args.header, len(newcols), NCOLS))
df.columns = defaultcols
- else:
- df.columns = defaultcols
+ else: # no header supplied - check for a real one that matches the x and y axis column names
+ colsok = (args.xcol in testcols) and (args.ycol in testcols) # if they match, probably ok...should use more code and logic..
+ if not colsok:
+ sys.stderr.write('replacing supplied header %s over existing %s' % (testcols, defaultcols))
+ df.columns = defaultcols
#df['col11'] = [-math.log(x) for x in df['col11']] # convert so large values reflect statistical surprise
- isColour = False
- isHover = False
- if len(args.colourcol.strip()) > 0:
- isColour = True
- if len(args.hovercol.strip()) > 0:
- isHover = True
if isHover and isColour:
fig = px.scatter(df, x=args.xcol, y=args.ycol, color=args.colourcol, hover_name=args.hovercol)
elif isHover:
diff -r 7c166107a2e2 -r 449c918bc4cd plotly_tabular_tool/test-data/htmlout_sample
--- a/plotly_tabular_tool/test-data/htmlout_sample Thu Jul 27 22:50:49 2023 +0000
+++ b/plotly_tabular_tool/test-data/htmlout_sample Fri Jul 28 03:44:26 2023 +0000
@@ -3,69 +3,12 @@
+/*! For license information please see plotly.min.js.LICENSE.txt */
+!function(t,e){"object"==typeof exports&&"object"==typeof module?module.exports=e():"function"==typeof define&&define.amd?define([],e):"object"==typeof exports?exports.Plotly=e():t.Plotly=e()}(self,(function(){return function(){var t={98847:function(t,e,r){"use strict";var n=r(71828),i={"X,X div":'direction:ltr;font-family:"Open Sans",verdana,arial,sans-serif;margin:0;padding:0;',"X input,X button":'font-family:"Open Sans",verdana,arial,sans-serif;',"X input:focus,X button:focus":"outline:none;","X a":"text-decoration:none;","X a:hover":"text-decoration:none;","X .crisp":"shape-rendering:crispEdges;","X .user-select-none":"-webkit-user-select:none;-moz-user-select:none;-ms-user-select:none;-o-user-select:none;user-select:none;","X svg":"overflow:hidden;","X svg a":"fill:#447adb;","X svg a:hover":"fill:#3c6dc5;","X .main-svg":"position:absolute;top:0;left:0;pointer-events:none;","X .main-svg .draglayer":"pointer-events:all;","X .cursor-default":"cursor:default;","X 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Jt=g.getComponentMethod("annotations","hasClickToShow")(t,Ot);f(n.select(s),Jt?"pointer":"")}s&&!a&&function(t,e,r){if(!r||r.length!==t._hoverdata.length)return!0;for(var n=r.length-1;n>=0;n--){var i=r[n],a=t._hoverdata[n];if(i.curveNumber!==a.curveNumber||String(i.pointNumber)!==String(a.pointNumber)||String(i.pointNumbers)!==String(a.pointNumbers))return!0}return!1}(t,0,Pt)&&(Pt&&t.emit("plotly_unhover",{event:e,points:Pt}),t.emit("plotly_hover",{event:e,points:t._hoverdata,xaxes:_,yaxes:w,xvals:q,yvals:G}))}(t,e,r,a,s)}))},e.loneHover=function(t,e){var r=!0;Array.isArray(t)||(r=!1,t=[t]);var i=e.gd,a=U(i),o=V(i),s=O(t.map((function(t){var r=t._x0||t.x0||t.x||0,n=t._x1||t.x1||t.x||0,s=t._y0||t.y0||t.y||0,l=t._y1||t.y1||t.y||0,u=t.eventData;if(u){var c=Math.min(r,n),f=Math.max(r,n),h=Math.min(s,l),d=Math.max(s,l),v=t.trace;if(g.traceIs(v,"gl3d")){var y=i._fullLayout[v.scene]._scene.container,m=y.offsetLeft,x=y.offsetTop;c+=m,f+=m,h+=x,d+=x}u.bbox={x0:c+o,x1:f+o,y0:h+a,y1:d+a},e.inOut_bbox&&e.inOut_bbox.push(u.bbox)}else u=!1;return{color:t.color||p.defaultLine,x0:t.x0||t.x||0,x1:t.x1||t.x||0,y0:t.y0||t.y||0,y1:t.y1||t.y||0,xLabel:t.xLabel,yLabel:t.yLabel,zLabel:t.zLabel,text:t.text,name:t.name,idealAlign:t.idealAlign,borderColor:t.borderColor,fontFamily:t.fontFamily,fontSize:t.fontSize,fontColor:t.fontColor,nameLength:t.nameLength,textAlign:t.textAlign,trace:t.trace||{index:0,hoverinfo:""},xa:{_offset:0},ya:{_offset:0},index:0,hovertemplate:t.hovertemplate||!1,hovertemplateLabels:t.hovertemplateLabels||!1,eventData:u}})),{gd:i,hovermode:"closest",rotateLabels:!1,bgColor:e.bgColor||p.background,container:n.select(e.container),outerContainer:e.outerContainer||e.container}).hoverLabels,l=0,u=0;return s.sort((function(t,e){return t.y0-e.y0})).each((function(t,r){var n=t.y0-t.by/2;t.offset=n-5([\s\S]*)<\/extra>/;function O(t,e){var 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i,s,l,u,f=r.select("text.nums"),p=t.anchor,d="end"===p?-1:1,v=(u=(l=(s={start:1,end:-1,middle:0}[(i=t).anchor])*(M+S))+s*(i.txwidth+S),"middle"===i.anchor&&(l-=i.tx2width/2,u+=i.txwidth/2+S),{alignShift:s,textShiftX:l,text2ShiftX:u}),g=D(t,e),y=g.x,m=g.y,x="middle"===p;r.select("path").attr("d",x?"M-"+a(t.bx/2+t.tx2width/2)+","+o(m-t.by/2)+"h"+a(t.bx)+"v"+o(t.by)+"h-"+a(t.bx)+"Z":"M0,0L"+a(d*M+y)+","+o(M+m)+"v"+o(t.by/2-M)+"h"+a(d*t.bx)+"v-"+o(t.by)+"H"+a(d*M+y)+"V"+o(m-M)+"Z");var b=y+v.textShiftX,_=m+t.ty0-t.by/2+S,w=t.textAlign||"auto";"auto"!==w&&("left"===w&&"start"!==p?(f.attr("text-anchor","start"),b=x?-t.bx/2-t.tx2width/2+S:-t.bx-S):"right"===w&&"end"!==p&&(f.attr("text-anchor","end"),b=x?t.bx/2-t.tx2width/2-S:t.bx+S)),f.call(c.positionText,a(b),o(_)),t.tx2width&&(r.select("text.name").call(c.positionText,a(v.text2ShiftX+v.alignShift*S+y),o(m+t.ty0-t.by/2+S)),r.select("rect").call(h.setRect,a(v.text2ShiftX+(v.alignShift-1)*t.tx2width/2+y),o(m-t.by/2-1),a(t.tx2width),o(t.by+2)))}))}function R(t,e){var r=t.index,n=t.trace||{},a=t.cd[0],s=t.cd[r]||{};function l(t){return t||i(t)&&0===t}var u=Array.isArray(r)?function(t,e){var i=o.castOption(a,r,t);return l(i)?i:o.extractOption({},n,"",e)}:function(t,e){return o.extractOption(s,n,t,e)};function c(e,r,n){var i=u(r,n);l(i)&&(t[e]=i)}if(c("hoverinfo","hi","hoverinfo"),c("bgcolor","hbg","hoverlabel.bgcolor"),c("borderColor","hbc","hoverlabel.bordercolor"),c("fontFamily","htf","hoverlabel.font.family"),c("fontSize","hts","hoverlabel.font.size"),c("fontColor","htc","hoverlabel.font.color"),c("nameLength","hnl","hoverlabel.namelength"),c("textAlign","hta","hoverlabel.align"),t.posref="y"===e||"closest"===e&&"h"===n.orientation?t.xa._offset+(t.x0+t.x1)/2:t.ya._offset+(t.y0+t.y1)/2,t.x0=o.constrain(t.x0,0,t.xa._length),t.x1=o.constrain(t.x1,0,t.xa._length),t.y0=o.constrain(t.y0,0,t.ya._length),t.y1=o.constrain(t.y1,0,t.ya._length),void 0!==t.xLabelVal&&(t.xLabel="xLabel"in t?t.xLabel:v.hoverLabelText(t.xa,t.xLabelVal,n.xhoverformat),t.xVal=t.xa.c2d(t.xLabelVal)),void 0!==t.yLabelVal&&(t.yLabel="yLabel"in t?t.yLabel:v.hoverLabelText(t.ya,t.yLabelVal,n.yhoverformat),t.yVal=t.ya.c2d(t.yLabelVal)),void 0!==t.zLabelVal&&void 0===t.zLabel&&(t.zLabel=String(t.zLabelVal)),!(isNaN(t.xerr)||"log"===t.xa.type&&t.xerr<=0)){var f=v.tickText(t.xa,t.xa.c2l(t.xerr),"hover").text;void 0!==t.xerrneg?t.xLabel+=" +"+f+" / -"+v.tickText(t.xa,t.xa.c2l(t.xerrneg),"hover").text:t.xLabel+=" ± "+f,"x"===e&&(t.distance+=1)}if(!(isNaN(t.yerr)||"log"===t.ya.type&&t.yerr<=0)){var h=v.tickText(t.ya,t.ya.c2l(t.yerr),"hover").text;void 0!==t.yerrneg?t.yLabel+=" +"+h+" / -"+v.tickText(t.ya,t.ya.c2l(t.yerrneg),"hover").text:t.yLabel+=" ± "+h,"y"===e&&(t.distance+=1)}var p=t.hoverinfo||t.trace.hoverinfo;return p&&"all"!==p&&(-1===(p=Array.isArray(p)?p:p.split("+")).indexOf("x")&&(t.xLabel=void 0),-1===p.indexOf("y")&&(t.yLabel=void 0),-1===p.indexOf("z")&&(t.zLabel=void 0),-1===p.indexOf("text")&&(t.text=void 0),-1===p.indexOf("name")&&(t.name=void 0)),t}function F(t,e,r){var n,i,o=r.container,s=r.fullLayout,l=s._size,u=r.event,c=!!e.hLinePoint,f=!!e.vLinePoint;if(o.selectAll(".spikeline").remove(),f||c){var d=p.combine(s.plot_bgcolor,s.paper_bgcolor);if(c){var g,y,m=e.hLinePoint;n=m&&m.xa,"cursor"===(i=m&&m.ya).spikesnap?(g=u.pointerX,y=u.pointerY):(g=n._offset+m.x,y=i._offset+m.y);var x,b,_=a.readability(m.color,d)<1.5?p.contrast(d):m.color,w=i.spikemode,T=i.spikethickness,k=i.spikecolor||_,A=v.getPxPosition(t,i);if(-1!==w.indexOf("toaxis")||-1!==w.indexOf("across")){if(-1!==w.indexOf("toaxis")&&(x=A,b=g),-1!==w.indexOf("across")){var M=i._counterDomainMin,S=i._counterDomainMax;"free"===i.anchor&&(M=Math.min(M,i.position),S=Math.max(S,i.position)),x=l.l+M*l.w,b=l.l+S*l.w}o.insert("line",":first-child").attr({x1:x,x2:b,y1:y,y2:y,"stroke-width":T,stroke:k,"stroke-dasharray":h.dashStyle(i.spikedash,T)}).classed("spikeline",!0).classed("crisp",!0),o.insert("line",":first-child").attr({x1:x,x2:b,y1:y,y2:y,"stroke-width":T+2,stroke:d}).classed("spikeline",!0).classed("crisp",!0)}-1!==w.indexOf("marker")&&o.insert("circle",":first-child").attr({cx:A+("right"!==i.side?T:-T),cy:y,r:T,fill:k}).classed("spikeline",!0)}if(f){var E,L,C=e.vLinePoint;n=C&&C.xa,i=C&&C.ya,"cursor"===n.spikesnap?(E=u.pointerX,L=u.pointerY):(E=n._offset+C.x,L=i._offset+C.y);var P,O,I=a.readability(C.color,d)<1.5?p.contrast(d):C.color,D=n.spikemode,z=n.spikethickness,R=n.spikecolor||I,F=v.getPxPosition(t,n);if(-1!==D.indexOf("toaxis")||-1!==D.indexOf("across")){if(-1!==D.indexOf("toaxis")&&(P=F,O=L),-1!==D.indexOf("across")){var B=n._counterDomainMin,N=n._counterDomainMax;"free"===n.anchor&&(B=Math.min(B,n.position),N=Math.max(N,n.position)),P=l.t+(1-N)*l.h,O=l.t+(1-B)*l.h}o.insert("line",":first-child").attr({x1:E,x2:E,y1:P,y2:O,"stroke-width":z,stroke:R,"stroke-dasharray":h.dashStyle(n.spikedash,z)}).classed("spikeline",!0).classed("crisp",!0),o.insert("line",":first-child").attr({x1:E,x2:E,y1:P,y2:O,"stroke-width":z+2,stroke:d}).classed("spikeline",!0).classed("crisp",!0)}-1!==D.indexOf("marker")&&o.insert("circle",":first-child").attr({cx:E,cy:F-("top"!==n.side?z:-z),r:z,fill:R}).classed("spikeline",!0)}}}function B(t,e){return!e||e.vLinePoint!==t._spikepoints.vLinePoint||e.hLinePoint!==t._spikepoints.hLinePoint}function N(t,e){return c.plainText(t||"",{len:e,allowedTags:["br","sub","sup","b","i","em"]})}function j(t,e,r){var n=e[t+"a"],i=e[t+"Val"],a=e.cd[0];if("category"===n.type||"multicategory"===n.type)i=n._categoriesMap[i];else if("date"===n.type){var o=e.trace[t+"periodalignment"];if(o){var 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l=(i[n]||s[n])(),c=t._isSatellite?180*Math.acos(1/e.distance)/Math.PI:t._isClipped?w.lonaxisSpan[r]/2:null,f=["center","rotate","parallels","clipExtent"],h=function(t){return t?l:[]},p=0;pc*Math.PI/180}return!1},l.getPath=function(){return a().projection(l)},l.getBounds=function(t){return l.getPath().bounds(t)},l.precision(w.precision),t._isSatellite&&l.tilt(e.tilt).distance(e.distance),c&&l.clipAngle(c-w.clipPad),l}(n),m=[[l.l+l.w*c.x[0],l.t+l.h*(1-c.y[1])],[l.l+l.w*c.x[1],l.t+l.h*(1-c.y[0])]],x=n.center||{},b=f.rotation||{},_=h.range||[],T=p.range||[];if(n.fitbounds){d._length=m[1][0]-m[0][0],v._length=m[1][1]-m[0][1],d.range=g(r,d),v.range=g(r,v);var k=(d.range[0]+d.range[1])/2,A=(v.range[0]+v.range[1])/2;if(n._isScoped)x={lon:k,lat:A};else if(n._isClipped){x={lon:k,lat:A},b={lon:k,lat:A,roll:b.roll};var M=f.type,S=w.lonaxisSpan[M]/2||180,L=w.lataxisSpan[M]/2||90;_=[k-S,k+S],T=[A-L,A+L]}else x={lon:k,lat:A},b={lon:k,lat:b.lat,roll:b.roll}}y.center([x.lon-b.lon,x.lat-b.lat]).rotate([-b.lon,-b.lat,b.roll]).parallels(f.parallels);var C=E(_,T);y.fitExtent(m,C);var P=this.bounds=y.getBounds(C),O=this.fitScale=y.scale(),I=y.translate();if(n.fitbounds){var D=y.getBounds(E(d.range,v.range)),z=Math.min((P[1][0]-P[0][0])/(D[1][0]-D[0][0]),(P[1][1]-P[0][1])/(D[1][1]-D[0][1]));isFinite(z)?y.scale(z*O):u.warn("Something went wrong during"+this.id+"fitbounds computations.")}else y.scale(f.scale*O);var R=this.midPt=[(P[0][0]+P[1][0])/2,(P[0][1]+P[1][1])/2];if(y.translate([I[0]+(R[0]-I[0]),I[1]+(R[1]-I[1])]).clipExtent(P),n._isAlbersUsa){var F=y([x.lon,x.lat]),B=y.translate();y.translate([B[0]-(F[0]-B[0]),B[1]-(F[1]-B[1])])}},S.updateBaseLayers=function(t,e){var r=this,i=r.topojson,a=r.layers,o=r.basePaths;function s(t){return"lonaxis"===t||"lataxis"===t}function l(t){return Boolean(w.lineLayers[t])}function u(t){return Boolean(w.fillLayers[t])}var c=(this.hasChoropleth?w.layersForChoropleth:w.layers).filter((function(t){return l(t)||u(t)?e["show"+t]:!s(t)||e[t].showgrid})),p=r.framework.selectAll(".layer").data(c,String);p.exit().each((function(t){delete a[t],delete o[t],n.select(this).remove()})),p.enter().append("g").attr("class",(function(t){return"layer "+t})).each((function(t){var e=a[t]=n.select(this);"bg"===t?r.bgRect=e.append("rect").style("pointer-events","all"):s(t)?o[t]=e.append("path").style("fill","none"):"backplot"===t?e.append("g").classed("choroplethlayer",!0):"frontplot"===t?e.append("g").classed("scatterlayer",!0):l(t)?o[t]=e.append("path").style("fill","none").style("stroke-miterlimit",2):u(t)&&(o[t]=e.append("path").style("stroke","none"))})),p.order(),p.each((function(r){var n=o[r],a=w.layerNameToAdjective[r];"frame"===r?n.datum(w.sphereSVG):l(r)||u(r)?n.datum(A(i,i.objects[r])):s(r)&&n.datum(function(t,e,r){var n,i,a,o=e[t],s=w.scopeDefaults[e.scope];"lonaxis"===t?(n=s.lonaxisRange,i=s.lataxisRange,a=function(t,e){return[t,e]}):"lataxis"===t&&(n=s.lataxisRange,i=s.lonaxisRange,a=function(t,e){return[e,t]});var l={type:"linear",range:[n[0],n[1]-1e-6],tick0:o.tick0,dtick:o.dtick};v.setConvert(l,r);var u=v.calcTicks(l);e.isScoped||"lonaxis"!==t||u.pop();for(var c=u.length,f=new Array(c),h=0;h-1&&b(n.event,i,[r.xaxis],[r.yaxis],r.id,c),s.indexOf("event")>-1&&p.click(i,n.event))}))}function f(t){return r.projection.invert([t[0]+r.xaxis._offset,t[1]+r.yaxis._offset])}},S.makeFramework=function(){var t=this,e=t.graphDiv,r=e._fullLayout,i="clip"+r._uid+t.id;t.clipDef=r._clips.append("clipPath").attr("id",i),t.clipRect=t.clipDef.append("rect"),t.framework=n.select(t.container).append("g").attr("class","geo "+t.id).call(h.setClipUrl,i,e),t.project=function(e){var r=t.projection(e);return r?[r[0]-t.xaxis._offset,r[1]-t.yaxis._offset]:[null,null]},t.xaxis={_id:"x",c2p:function(e){return t.project(e)[0]}},t.yaxis={_id:"y",c2p:function(e){return t.project(e)[1]}},t.mockAxis={type:"linear",showexponent:"all",exponentformat:"B"},v.setConvert(t.mockAxis,r)},S.saveViewInitial=function(t){var e,r=t.center||{},n=t.projection,i=n.rotation||{};this.viewInitial={fitbounds:t.fitbounds,"projection.scale":n.scale},e=t._isScoped?{"center.lon":r.lon,"center.lat":r.lat}:t._isClipped?{"projection.rotation.lon":i.lon,"projection.rotation.lat":i.lat}:{"center.lon":r.lon,"center.lat":r.lat,"projection.rotation.lon":i.lon},u.extendFlat(this.viewInitial,e)},S.render=function(t){this._hasMarkerAngles&&t?this.plot(this._geoCalcData,this._fullLayout,[],!0):this._render()},S._render=function(){var t,e=this.projection,r=e.getPath();function n(t){var r=e(t.lonlat);return r?c(r[0],r[1]):null}function i(t){return e.isLonLatOverEdges(t.lonlat)?"none":null}for(t in this.basePaths)this.basePaths[t].attr("d",r);for(t in this.dataPaths)this.dataPaths[t].attr("d",(function(t){return r(t.geojson)}));for(t in this.dataPoints)this.dataPoints[t].attr("display",i).attr("transform",n)}},44622:function(t,e,r){"use strict";var n=r(27659).AU,i=r(71828).counterRegex,a=r(69082),o="geo",s=i(o),l={};l[o]={valType:"subplotid",dflt:o,editType:"calc"},t.exports={attr:o,name:o,idRoot:o,idRegex:s,attrRegex:s,attributes:l,layoutAttributes:r(77519),supplyLayoutDefaults:r(82161),plot:function(t){for(var e=t._fullLayout,r=t.calcdata,i=e._subplots[o],s=0;s0&&P<0&&(P+=360);var O,I,D,z=(C+P)/2;if(!p){var R=d?f.projRotate:[z,0,0];O=r("projection.rotation.lon",R[0]),r("projection.rotation.lat",R[1]),r("projection.rotation.roll",R[2]),r("showcoastlines",!d&&x)&&(r("coastlinecolor"),r("coastlinewidth")),r("showocean",!!x&&void 0)&&r("oceancolor")}p?(I=-96.6,D=38.7):(I=d?z:O,D=(L[0]+L[1])/2),r("center.lon",I),r("center.lat",D),v&&(r("projection.tilt"),r("projection.distance")),g&&r("projection.parallels",f.projParallels||[0,60]),r("projection.scale"),r("showland",!!x&&void 0)&&r("landcolor"),r("showlakes",!!x&&void 0)&&r("lakecolor"),r("showrivers",!!x&&void 0)&&(r("rivercolor"),r("riverwidth")),r("showcountries",d&&"usa"!==c&&x)&&(r("countrycolor"),r("countrywidth")),("usa"===c||"north america"===c&&50===u)&&(r("showsubunits",x),r("subunitcolor"),r("subunitwidth")),d||r("showframe",x)&&(r("framecolor"),r("framewidth")),r("bgcolor"),r("fitbounds")&&(delete e.projection.scale,d?(delete e.center.lon,delete e.center.lat):y?(delete e.center.lon,delete e.center.lat,delete e.projection.rotation.lon,delete e.projection.rotation.lat,delete e.lonaxis.range,delete e.lataxis.range):(delete e.center.lon,delete e.center.lat,delete e.projection.rotation.lon))}t.exports=function(t,e,r){i(t,e,r,{type:"geo",attributes:s,handleDefaults:u,fullData:r,partition:"y"})}},74455:function(t,e,r){"use strict";var n=r(39898),i=r(71828),a=r(73972),o=Math.PI/180,s=180/Math.PI,l={cursor:"pointer"},u={cursor:"auto"};function c(t,e){return n.behavior.zoom().translate(e.translate()).scale(e.scale())}function f(t,e,r){var n=t.id,o=t.graphDiv,s=o.layout,l=s[n],u=o._fullLayout,c=u[n],f={},h={};function p(t,e){f[n+"."+t]=i.nestedProperty(l,t).get(),a.call("_storeDirectGUIEdit",s,u._preGUI,f);var r=i.nestedProperty(c,t);r.get()!==e&&(r.set(e),i.nestedProperty(l,t).set(e),h[n+"."+t]=e)}r(p),p("projection.scale",e.scale()/t.fitScale),p("fitbounds",!1),o.emit("plotly_relayout",h)}function h(t,e){var r=c(0,e);function i(r){var n=e.invert(t.midPt);r("center.lon",n[0]),r("center.lat",n[1])}return r.on("zoomstart",(function(){n.select(this).style(l)})).on("zoom",(function(){e.scale(n.event.scale).translate(n.event.translate),t.render(!0);var r=e.invert(t.midPt);t.graphDiv.emit("plotly_relayouting",{"geo.projection.scale":e.scale()/t.fitScale,"geo.center.lon":r[0],"geo.center.lat":r[1]})})).on("zoomend",(function(){n.select(this).style(u),f(t,e,i)})),r}function p(t,e){var r,i,a,o,s,h,p,d,v,g=c(0,e);function y(t){return e.invert(t)}function m(r){var 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e=t[0]*o,r=t[1]*o,n=Math.cos(r);return[n*Math.cos(e),n*Math.sin(e),Math.sin(r)]}(r)}function g(t,e,r,n){var i=y(r-t),a=y(n-e);return Math.sqrt(i*i+a*a)}function y(t){return(t%360+540)%360-180}function m(t,e,r){var n=r*o,i=t.slice(),a=0===e?1:0,s=2===e?1:2,l=Math.cos(n),u=Math.sin(n);return i[a]=t[a]*l-t[s]*u,i[s]=t[s]*l+t[a]*u,i}function x(t,e){for(var r=0,n=0,i=t.length;nMath.abs(s)?(u.boxEnd[1]=u.boxStart[1]+Math.abs(a)*_*(s>=0?1:-1),u.boxEnd[1]l[3]&&(u.boxEnd[1]=l[3],u.boxEnd[0]=u.boxStart[0]+(l[3]-u.boxStart[1])/Math.abs(_))):(u.boxEnd[0]=u.boxStart[0]+Math.abs(s)/_*(a>=0?1:-1),u.boxEnd[0]l[2]&&(u.boxEnd[0]=l[2],u.boxEnd[1]=u.boxStart[1]+(l[2]-u.boxStart[0])*Math.abs(_)))}}else u.boxEnabled?(a=u.boxStart[0]!==u.boxEnd[0],s=u.boxStart[1]!==u.boxEnd[1],a||s?(a&&(g(0,u.boxStart[0],u.boxEnd[0]),t.xaxis.autorange=!1),s&&(g(1,u.boxStart[1],u.boxEnd[1]),t.yaxis.autorange=!1),t.relayoutCallback()):t.glplot.setDirty(),u.boxEnabled=!1,u.boxInited=!1):u.boxInited&&(u.boxInited=!1);break;case"pan":u.boxEnabled=!1,u.boxInited=!1,e?(u.panning||(u.dragStart[0]=n,u.dragStart[1]=i),Math.abs(u.dragStart[0]-n).999&&(g="turntable"):g="turntable")}else g="turntable";r("dragmode",g),r("hovermode",n.getDfltFromLayout("hovermode"))}t.exports=function(t,e,r){var i=e._basePlotModules.length>1;o(t,e,r,{type:c,attributes:l,handleDefaults:f,fullLayout:e,font:e.font,fullData:r,getDfltFromLayout:function(e){if(!i)return n.validate(t[e],l[e])?t[e]:void 0},autotypenumbersDflt:e.autotypenumbers,paper_bgcolor:e.paper_bgcolor,calendar:e.calendar})}},65500:function(t,e,r){"use strict";var n=r(77894),i=r(27670).Y,a=r(1426).extendFlat,o=r(71828).counterRegex;function s(t,e,r){return{x:{valType:"number",dflt:t,editType:"camera"},y:{valType:"number",dflt:e,editType:"camera"},z:{valType:"number",dflt:r,editType:"camera"},editType:"camera"}}t.exports={_arrayAttrRegexps:[o("scene",".annotations",!0)],bgcolor:{valType:"color",dflt:"rgba(0,0,0,0)",editType:"plot"},camera:{up:a(s(0,0,1),{}),center:a(s(0,0,0),{}),eye:a(s(1.25,1.25,1.25),{}),projection:{type:{valType:"enumerated",values:["perspective","orthographic"],dflt:"perspective",editType:"calc"},editType:"calc"},editType:"camera"},domain:i({name:"scene",editType:"plot"}),aspectmode:{valType:"enumerated",values:["auto","cube","data","manual"],dflt:"auto",editType:"plot",impliedEdits:{"aspectratio.x":void 0,"aspectratio.y":void 0,"aspectratio.z":void 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r=t[i[e]];r.visible?(this.enabled[e]=r.showspikes,this.colors[e]=n(r.spikecolor),this.drawSides[e]=r.spikesides,this.lineWidth[e]=r.spikethickness):(this.enabled[e]=!1,this.drawSides[e]=!1)}},t.exports=function(t){var e=new a;return e.merge(t),e}},96085:function(t,e,r){"use strict";t.exports=function(t){for(var e=t.axesOptions,r=t.glplot.axesPixels,s=t.fullSceneLayout,l=[[],[],[]],u=0;u<3;++u){var c=s[a[u]];if(c._length=(r[u].hi-r[u].lo)*r[u].pixelsPerDataUnit/t.dataScale[u],Math.abs(c._length)===1/0||isNaN(c._length))l[u]=[];else{c._input_range=c.range.slice(),c.range[0]=r[u].lo/t.dataScale[u],c.range[1]=r[u].hi/t.dataScale[u],c._m=1/(t.dataScale[u]*r[u].pixelsPerDataUnit),c.range[0]===c.range[1]&&(c.range[0]-=1,c.range[1]+=1);var f=c.tickmode;if("auto"===c.tickmode){c.tickmode="linear";var h=c.nticks||i.constrain(c._length/40,4,9);n.autoTicks(c,Math.abs(c.range[1]-c.range[0])/h)}for(var p=n.calcTicks(c,{msUTC:!0}),d=0;d/g," 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