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56
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1 # using the galaxy venv this seems to work
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2 . /galaxy_venv/bin/activate
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3 python scripts/tool_shed/build_ts_whoosh_index.py -c config/tool_shed.yml --config-section tool_shed
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4 # eeesh. /etc/galaxy is where the actual galaxy.yml lives - despite other configs being where they might be expected
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5 # fix tool_shed.yml to 0.0.0.0 and admin email
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6 # add tgz to datatypes :(
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7 # need to source a venv in /export/tool_deps/toolfactorydeps/0.01/fubar/toolfactorydeps/9e9428fe9134/env.sh
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8 # as nothing was done by the setup_virtualenv step apparently.
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9 # gcc and friends for planemo pip installation
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10 # File "/galaxy-central/lib/galaxy/tool_util/verify/interactor.py", line 595, in <listcomp>
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11 # test_user = [user for user in all_users if user["email"] == email][0]
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12 # add local to tool_sheds_conf.xml
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13 # <tool_sheds>
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14 # <tool_shed name="local" url="http://localhost:9009"/>
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15 # mercurial > 5.5!!
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16
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