Mercurial > repos > fubar > tool_factory_2

comparison toolfactory/rgToolFactory2.xml @ 76:46db8143adb7 draft

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Uploaded
author fubar
date Mon, 16 Nov 2020 02:42:49 +0000
parents 95adf7148d9a
children 1fa49a9a4ec5
comparison
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75:25dd9364a32a 76:46db8143adb7
130 </repeat> 130 </repeat>
131 </xml> 131 </xml>
132 </macros> 132 </macros>
133 133
134 <requirements> 134 <requirements>
135 <requirement type="package" >galaxyxml</requirement> 135 <requirement type="package">galaxyxml</requirement>
136 <requirement type="package" >bioblend</requirement> 136 <requirement type="package">bioblend</requirement>
137 <requirement type="package">planemo</requirement> 137 <requirement type="package">planemo</requirement>
138 <container type="docker">quay.io/fubar2/toolfactorybiocontainer</container> 138 <container type="docker">quay.io/fubar2/toolfactorybiocontainer</container>
139 </requirements> 139 </requirements>
140 140
141 <command ><![CDATA[ 141 <command ><![CDATA[
142 #import os 142 #import os
143 #set dev_env = os.environ.get('GALAXY_DEVELOPMENT_ENVIRONMENT', '0') == '1' 143 #set dev_env = os.environ.get('GALAXY_DEVELOPMENT_ENVIRONMENT', '0') == '1'
144 #if not $dev_env and ( $__user_email__ not in $__admin_users__ ): 144 #if not $dev_env and ( $__user_email__ not in $__admin_users__ ):
145 rgToolFactory2.py --bad_user $__user_email__ 145 python3 $__tool_directory__/rgToolFactory2.py --bad_user $__user_email__
146 #else: 146 #else:
147 rgToolFactory2.py 147 python3 $__tool_directory__/rgToolFactory2.py
148 #if len(str($cl_prefix)) > 3: 148 #if len(str($cl_prefix)) > 3:
149 --cl_prefix "$cl_prefix" 149 --cl_prefix "$cl_prefix"
150 #end if 150 #end if
151 #if $cover.commover == "yes": 151 #if $cover.commover == "yes":
152 #if len(str($cover.command_override)) > 10: 152 #if len(str($cover.command_override)) > 10: