comparison test-data/tf2_test_runme.py @ 0:c34063ab3735 draft

Initial commit of code in iuc github repository
author fubar
date Thu, 01 Jan 2015 21:58:00 -0500
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-1:000000000000 0:c34063ab3735
1 ### bog standard argparse for 3 possible comma separated lists
2 ## followed by some silly reverse each row code provided as an example
3 ## you're supposed to replace it with your great code..
4 import sys
5 import argparse
6 import copy
7 argp=argparse.ArgumentParser()
8 argp.add_argument('--INNAMES',default=None)
9 argp.add_argument('--INPATHS',default=None)
10 argp.add_argument('--OUTPATH',default=None)
11 argp.add_argument('--additional_parameters',default=[],action="append")
12 argp.add_argument('otherargs', nargs=argparse.REMAINDER)
13 args = argp.parse_args()
14 fout = open(args.OUTPATH,'w')
15 sins = open(args.INPATHS.split(',')[0]).readlines()
16 for i,sin in enumerate(sins):
17 row = sin.strip().split('\t')
18 rrow = copy.copy(row)
19 lrow = len(row)
20 if (lrow > 1):
21 for j in range(lrow):
22 rrow[j] = row[lrow-j-1]
23 fout.write('\t'.join(rrow))
24 fout.write('\n')
25 fout.close()