Mercurial > repos > fubar > tool_factory_2

comparison toolfactory/rgToolFactory2.xml @ 129:c35ff02652bf draft

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Uploaded
author fubar
date Sun, 04 Apr 2021 06:36:14 +0000
parents 56aa8105000d
children e8e8071c9d0c
comparison
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128:56aa8105000d 129:c35ff02652bf
190 #set dev_env = os.environ.get('GALAXY_DEVELOPMENT_ENVIRONMENT', '0') == '1' 190 #set dev_env = os.environ.get('GALAXY_DEVELOPMENT_ENVIRONMENT', '0') == '1'
191 #if not $dev_env and ( $__user_email__ not in $__admin_users__ ): 191 #if not $dev_env and ( $__user_email__ not in $__admin_users__ ):
192 python3 $__tool_directory__/rgToolFactory2.py --bad_user $__user_email__ 192 python3 $__tool_directory__/rgToolFactory2.py --bad_user $__user_email__
193 #else: 193 #else:
194 python3 $__tool_directory__/rgToolFactory2.py 194 python3 $__tool_directory__/rgToolFactory2.py
195 #if len(str($cl_prefix)) > 3: 195 #if len(str($cl_suffix)) > 0:
196 --cl_prefix "$cl_prefix" 196 --cl_suffix "$cl_suffix"
197 #end if 197 #end if
198 #if $cover.commover == "yes": 198 #if $cover.commover == "yes":
199 #if len(str($cover.command_override)) > 10: 199 #if len(str($cover.command_override)) > 10:
200 --command_override "$commandoverride" 200 --command_override "$commandoverride"
201 #end if 201 #end if
356 <when value="0"> 356 <when value="0">
357 <expand macro="io"/> 357 <expand macro="io"/>
358 </when> 358 </when>
359 </conditional> 359 </conditional>
360 </section> 360 </section>
361 <param name="cl_prefix" type="text" value="" label="Suffix for generated command line. Useful for bash post processing. Use override below to replace completely" 361 <param name="cl_suffix" type="text" value="" label="Suffix for generated command line. Useful for bash post processing. Use override below to replace completely"
362 help="';' separated bash commands can be used here for post processing - added at end of autogenerated command line" /> 362 help="';' separated bash commands can be used here for post processing - added at end of autogenerated command line">
363 <sanitizer>
364 <valid initial="string.printable" />
365 <mapping initial="none"/>
366 </sanitizer>
367 </param>
363 <conditional name="cover"> 368 <conditional name="cover">
364 <param name="commover" type="select" display="radio" label="Add Human wrought code to override the generated XML command and/or test section - DIY" 369 <param name="commover" type="select" display="radio" label="Add Human wrought code to override the generated XML command and/or test section - DIY"
365 help = "For arbitrary and artfull command lines. All i/o and parameters must be passed. Choose No unless needed. Not for the faint of heart"> 370 help = "For arbitrary and artfull command lines. All i/o and parameters must be passed. Choose No unless needed. Not for the faint of heart">
366 <option value="no" selected="true">No. Use automatically generated command/test XML </option> 371 <option value="no" selected="true">No. Use automatically generated command/test XML </option>
367 <option value="yes">Yes. XML needed to override autogenerated command and/or test segments will be pasted below</option> 372 <option value="yes">Yes. XML needed to override autogenerated command and/or test segments will be pasted below</option>