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comparison README.md @ 15:dd6cf2ddaac7 draft

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author fubar
date Wed, 28 Jan 2015 19:28:32 -0500
parents c34063ab3735
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14:3635f4518c4d 15:dd6cf2ddaac7
1 toolfactory_2 1 toolfactory_2
2 ============= 2 =============
3 3
4 This is an upgrade to the tool factory but with added parameters 4 This is an upgrade to the tool factory but with added parameters
5 (optionally editable in the generated tool form - otherwise fixed) and multiple input files. 5 (optionally editable in the generated tool form - otherwise fixed) and
6 multiple input files.
6 7
7 Any number of parameters up to the limit of your patience with repeat groups 8 Any number of parameters up to the limit of your patience with repeat groups
8 These are optionally editable by the user - names cannot be changed - no overwriting $JAVA_HOME_DIR 9 These are optionally editable by the user - names cannot be changed so
9 or else permanently fixed and not editable at run time. 10 no overwriting $JAVA_HOME_DIR or else permanently fixed and not editable at run time.
10 11
11 Any number of input files can be passed to your script, but of course it 12 Any number of input files can be passed to your script, but of course it
12 has to deal with them. Both path and metadata name are supplied either in the environment (bash/sh) or 13 has to deal with them. Both path and metadata name are supplied either in the environment
13 as command line parameters (python,perl,rscript) that need to be parsed and 14 (bash/sh) or as command line parameters (python,perl,rscript) that need to be parsed and
14 dealt with in the script. 15 dealt with in the script.
15 16