Mercurial > repos > fubar > tool_factory_2

diff toolfactory/rgToolFactory2.py @ 84:5304cda01f60 draft

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author fubar
date Thu, 19 Nov 2020 02:26:42 +0000
parents 48acd0708839
children dbbb9298a20f
line wrap: on
line diff
--- a/toolfactory/rgToolFactory2.py	Thu Nov 19 01:04:45 2020 +0000
+++ b/toolfactory/rgToolFactory2.py	Thu Nov 19 02:26:42 2020 +0000
@@ -1,4 +1,4 @@
-# rgToolFactory.py
+# replace with shebang for biocontainer
 # see https://github.com/fubar2/toolfactory
 #
 # copyright ross lazarus (ross stop lazarus at gmail stop com) May 2012
@@ -898,7 +898,7 @@
         if genoutputs:
             dummy, tfile = tempfile.mkstemp()
             cll = [
-                ".","/home/biodocker/galaxy-central/.venv/bin/activate &&",
+                ".","/home/biodocker/galaxy-central/.venv/bin/activate", "&&",
                 "planemo",
                 "test",
                 "--test_data", os.path.abspath(self.testdir),