Mercurial > repos > fubar > tool_factory_2
diff toolfactory/whoosh.sh @ 99:d4d88d393285 draft
Uploaded
author | fubar |
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date | Mon, 23 Nov 2020 02:22:01 +0000 |
parents | 68fbdbe35f08 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/toolfactory/whoosh.sh Mon Nov 23 02:22:01 2020 +0000 @@ -0,0 +1,16 @@ +# using the galaxy venv this seems to work +. /galaxy_venv/bin/activate +python scripts/tool_shed/build_ts_whoosh_index.py -c config/tool_shed.yml --config-section tool_shed +# eeesh. /etc/galaxy is where the actual galaxy.yml lives - despite other configs being where they might be expected +# fix tool_shed.yml to 0.0.0.0 and admin email +# add tgz to datatypes :( +# need to source a venv in /export/tool_deps/toolfactorydeps/0.01/fubar/toolfactorydeps/9e9428fe9134/env.sh +# as nothing was done by the setup_virtualenv step apparently. +# gcc and friends for planemo pip installation +# File "/galaxy-central/lib/galaxy/tool_util/verify/interactor.py", line 595, in <listcomp> +# test_user = [user for user in all_users if user["email"] == email][0] +# add local to tool_sheds_conf.xml +# <tool_sheds> +# <tool_shed name="local" url="http://localhost:9009"/> +# mercurial > 5.5!! +