Mercurial > repos > fubar > tool_factory_2
diff toolfactory/rgToolFactory2.xml @ 108:e878bfc6b80c draft
Uploaded
author | fubar |
---|---|
date | Sun, 29 Nov 2020 04:32:22 +0000 |
parents | 557d5f06f213 |
children | 223b78754735 |
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--- a/toolfactory/rgToolFactory2.xml Sat Nov 28 02:52:24 2020 +0000 +++ b/toolfactory/rgToolFactory2.xml Sun Nov 29 04:32:22 2020 +0000 @@ -79,7 +79,7 @@ <param name="history_CL" type="text" label="Positional: ordinal integer. Argparse: argument name expected for this output parameter. Use STDOUT if '>' required." help="If positional parameters, enter the integer ordinal expected for this parameter. If Argparse style, '--' will be prepended or '-' if single character" value=""/> <param name="history_test" type="text" label="Test pass decision criterion for this output compared to test generation" - help="Available options are diff:lines, sim_size" value="diff:2"/> + help="Available options are diff:[lines], sim_size:[delta (integer) or delta_frac (float)" value="sim_size:0.01"/> </repeat> </xml> <xml name="additparam"> @@ -232,7 +232,7 @@ <param name="tool_name" type="text" value="tool1" label="New tool ID and title for outputs" help="Toolshed repository name. Choose thoughtfully to avoid namespace clashes with other tool writers. Lower case, digits and underscores only"> <sanitizer invalid_char=""> - <valid initial="string.letters,string.digits"> + <valid initial="string.ascii_lowercase,string.digits"> <add value="_"/> </valid> </sanitizer> @@ -243,8 +243,8 @@ <conditional name="usescript"> <param name="choosescript" type="select" display="radio" label="Supply a script to either a dependency (e.g. python/R/bash) or a system executable such as Bash" help = "For script interpreters like Python or bash. Parameters and i/o specified below must match script's expectations - if you pass parameters, the script must deal with them"> - <option value="no" selected="true">No script required for this tool - just pass parameters on the command line to the first dependency listed above</option> - <option value="yes">Yes, a script is ready to be pasted below</option> + <option value="no">No script required for this tool - just pass parameters on the command line to the first dependency listed above</option> + <option value="yes" selected="true">Yes, a script is ready to be pasted below</option> </param> <when value="no"> <param name="dynScript" type="hidden" value="" /> @@ -324,8 +324,8 @@ <param name="make_Tool" type="select" display="radio" label="Choose the steps you want to run. The TF Docker container is recommended for local installation" help="Installation in this Galaxy is optional" > <option value="generate" >Run to generate tests only. Should fail if dependencies needed.</option> - <option value="gentest" selected="true">Test with planemo after generating.</option> - <option value="gentestinstall">Install in this Galaxy after generation and testing. Must have local ToolShed as in the TF Docker container</option> + <option value="gentest">Test with planemo after generating.</option> + <option value="gentestinstall" selected="true">Install in this Galaxy after generation and testing. Must have local ToolShed as in the TF Docker container</option> </param> <when value="generate"> <param name="galaxy_apikey" value="" type="hidden" ></param>