Mercurial > repos > fubar > tool_factory_2
view getlocalrpackages.py @ 16:0027d2f66096 draft
Deleted selected files
author | fubar |
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date | Wed, 28 Jan 2015 19:28:53 -0500 |
parents | dd6cf2ddaac7 |
children | a584ff2f7554 |
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import os import subprocess def find_packages(prefix="package_r_"): """ """ #locate env.sh | grep -i package_r_ #/data/extended/galaxyJune14_2014/tool_dependency/readline/6.2/devteam/package_r_2_15_0/8ab0d08a3da1/env.sh #/data/home/rlazarus/galaxy/tool_dependency_dir/R_3_1_1/3.1.1/fubar/package_r_3_1_1/5f1b8d22140a/env.sh #/data/home/rlazarus/galaxy/tool_dependency_dir/R_3_1_1/3.1.1/fubar/package_r_3_1_1/d9964efbfbe3/env.sh #/data/home/rlazarus/galtest/tool_dependency_dir/R_3_1_1/3.1.1/fubar/package_r_3_1_1/63cdb9b2234c/env.sh eprefix = prefix if prefix.find('/') <> -1: eprefix = prefix.replace('/','\/') # for grep cl = ['locate env.sh | grep -i %s' % eprefix,] p = subprocess.Popen(cl, stdout=subprocess.PIPE, stderr=subprocess.PIPE,shell=True) out, err = p.communicate() fpaths = out.split('\n') fpaths = [x for x in fpaths if len(x) > 1] fver = [x.split(os.path.sep)[-4:-1] for x in fpaths] # >>> foo.split(os.path.sep)[-4:-1] # ['fubar', 'package_r_3_1_1', '63cdb9b2234c'] if len(fpaths) > 0: res = [['%s rev %s owner %s' % (x[1],x[2],x[0]),fpaths[i],False] for i,x in enumerate(fver)] res.insert(0,['Use default (system) interpreter','system',False]) else: res = [['Use default (system) interpreter','system',False], ['**WARNING** NO package env.sh files found - is the "locate" system command working? Are any interpreters installed?','system',True]] if len(res) > 2: res[1][2] = True # selected if more than one # return a triplet - user_sees,value,selected - all unselected if False return res if __name__ == "__main__": print find_packages()