Mercurial > repos > fubar > toolfactory
diff rgToolFactory.xml @ 9:e4e097a41064 draft
Uploaded
author | fubar |
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date | Wed, 19 Mar 2014 21:42:08 -0400 |
parents | 78c04d9fe621 |
children | 59bce2efadfe |
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--- a/rgToolFactory.xml Wed Mar 19 21:10:03 2014 -0400 +++ b/rgToolFactory.xml Wed Mar 19 21:42:08 2014 -0400 @@ -1,4 +1,4 @@ -<tool id="rgTF" name="Tool Factory" version="0.10"> +<tool id="rgTF" name="Tool Factory" version="1.10"> <description>Makes scripts into tools</description> <requirements> <requirement type="package" version="9.10">ghostscript</requirement> @@ -62,17 +62,15 @@ </conditional> <param name="make_HTML" type="select" label="Create an HTML report with links to all output files and thumbnail links to PDF images" size="60" help="Recommended for presenting complex outputs in an accessible manner. Turn off for simple tools so they just create one output"> - <option value="yes">Yes, arrange all outputs in an HTML output</option> + <option value="yes">Yes, arrange all outputs produced by my script as an HTML output</option> <option value="" selected="true">No, no HTML output file thanks</option> </param> - - - <param name="make_TAB" type="select" label="Create a new (default tabular) history output" + <param name="make_TAB" type="select" label="Create a new (default tabular) history output with or without an HTML file specified above" help="This is useful if your script creates a single new tabular file you want to appear in the history after the tool executes"> <option value="yes" selected="true">My script writes to a new history output</option> - <option value="">I only want an HTML output file</option> + <option value="">I do not want a new history output file</option> </param> - <param name="out_format" type="select" label="Galaxy datatype for your tool's output file" help="You may need to edit the xml to extend this list"> + <param name="out_format" type="select" label="Galaxy datatype for your tool's output file if any" help="You may need to edit the xml to extend this list"> <option value="tabular" selected="true">Tabular</option> <option value="interval">Interval</option> <option value="gz">gz</option> @@ -197,6 +195,7 @@ for (i in 1:10) { foo = runif(100) bar = rnorm(100) + bar = foo + 0.2*bar pdf(paste('yet',i,"anotherplot.pdf",sep='_')) plot(foo,bar,main=paste("Foo by Bar plot #",i),col="maroon", pch=3,cex=0.6) dev.off()