Mercurial > repos > galaxy-australia > alphafold2
diff docker/alphafold/setup.py @ 1:6c92e000d684 draft
"planemo upload for repository https://github.com/usegalaxy-au/galaxy-local-tools commit a510e97ebd604a5e30b1f16e5031f62074f23e86"
author | galaxy-australia |
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date | Tue, 01 Mar 2022 02:53:05 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/docker/alphafold/setup.py Tue Mar 01 02:53:05 2022 +0000 @@ -0,0 +1,58 @@ +# Copyright 2021 DeepMind Technologies Limited +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +"""Install script for setuptools.""" + +from setuptools import find_packages +from setuptools import setup + +setup( + name='alphafold', + version='2.1.0', + description='An implementation of the inference pipeline of AlphaFold v2.0.' + 'This is a completely new model that was entered as AlphaFold2 in CASP14 ' + 'and published in Nature.', + author='DeepMind', + author_email='alphafold@deepmind.com', + license='Apache License, Version 2.0', + url='https://github.com/deepmind/alphafold', + packages=find_packages(), + install_requires=[ + 'absl-py', + 'biopython', + 'chex', + 'dm-haiku', + 'dm-tree', + 'docker', + 'immutabledict', + 'jax', + 'ml-collections', + 'numpy', + 'pandas', + 'scipy', + 'tensorflow-cpu', + ], + tests_require=['mock'], + classifiers=[ + 'Development Status :: 5 - Production/Stable', + 'Intended Audience :: Science/Research', + 'License :: OSI Approved :: Apache Software License', + 'Operating System :: POSIX :: Linux', + 'Programming Language :: Python :: 3.6', + 'Programming Language :: Python :: 3.7', + 'Programming Language :: Python :: 3.8', + 'Programming Language :: Python :: 3.9', + 'Programming Language :: Python :: 3.10', + 'Topic :: Scientific/Engineering :: Artificial Intelligence', + ], +)