Mercurial > repos > galaxy-australia > alphafold2
diff validate_fasta.py @ 15:a58f7eb0df2c draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au commit fd45a857a71358e7e5375dcfb5043cdc8560c5a5
author | galaxy-australia |
---|---|
date | Fri, 10 Mar 2023 02:48:07 +0000 |
parents | d00e15139065 |
children |
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--- a/validate_fasta.py Tue Feb 28 01:15:42 2023 +0000 +++ b/validate_fasta.py Fri Mar 10 02:48:07 2023 +0000 @@ -205,6 +205,11 @@ for fas in clean_fastas: fw.write(fas) + sys.stderr.write("Validated FASTA sequence(s):\n\n") + for fas in clean_fastas: + sys.stderr.write(fas.header + '\n') + sys.stderr.write(fas.aa_seq + '\n\n') + except ValueError as exc: sys.stderr.write(f"{exc}\n\n") raise exc