Mercurial > repos > galaxy-australia > blobtools

comparison macros.xml @ 0:234b3e869b16 draft default tip

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"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/blobtools commit 89d41433582a6470135c026aad07b714eb3145d4"
author galaxy-australia
date Wed, 26 Oct 2022 06:54:04 +0000
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-1:000000000000 0:234b3e869b16
1 <macros>
2 <xml name="requirements">
3 <requirements>
4 <requirement type="package" version="1.1.1">blobtools</requirement>
5 <requirement type="package" version="3.2.2">matplotlib</requirement>
6 </requirements>
7 </xml>
8 <xml name="stdio">
9 <stdio>
10 <exit_code range=":-1" level="fatal" description="Error: Cannot open file" />
11 <exit_code range="1:" level="fatal" description="Error" />
12 </stdio>
13 </xml>
14 <xml name="version_command">
15 <version_command><![CDATA[
16 blobtools --version 2>&1 | head -1
17 ]]></version_command>
18 </xml>
19 <xml name="macro_create_input">
20 <param name="input_fasta" type="data" format="fasta" label="Sequence file"/>
21 <param name="input_bam" type="data" format="bam" label="Alignment file"/>
22 <param name="input_blast" type="data" format="tabular" label="Simplified Blast file"/>
23 </xml>
24 <xml name="macro_view_input">
25 <param name="input_json" type="data" format="json" label="Json input file"/>
26 </xml>
27 <token name="@SET_TMP_DIR@">
28 export MPLCONFIGDIR="/tmp"
29 </token>
30 </macros>