Mercurial > repos > galaxy-australia > blobtools
view test-data/test.blobDB.json.bestsum.phylum.p8.span.100.blobplot.stats.txt @ 0:234b3e869b16 draft default tip
"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/blobtools commit 89d41433582a6470135c026aad07b714eb3145d4"
| author | galaxy-australia |
|---|---|
| date | Wed, 26 Oct 2022 06:54:04 +0000 |
| parents | |
| children |
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## 1.1.1 ## bam0=/home/mthang/tools/blobtools/example/mapping_1.sorted.bam # name colour count_visible count_visible_perc span_visible span_visible_perc n50 gc_mean gc_std bam0_mean bam0_std bam0_read_map bam0_read_map_p all None 10 100.0% 18,477 100.0% 4,060 0.27 0.039 177.4 146.7 15,097 98.6% Nematoda #1f77b4 3 100.0% 6,273 100.0% 4,060 0.28 0.037 110.3 53.0 2,015 13.2% no-hit #d3d3d3 1 100.0% 6,273 100.0% 6,273 0.31 0.0 336.4 0.0 8,525 55.7% Actinobacteria #ff7f0e 4 100.0% 3,369 100.0% 951 0.27 0.03 235.2 184.3 3,497 22.8% unresolved #d62728 1 100.0% 2,346 100.0% 2,346 0.28 0.0 106.4 0.0 1,008 6.6% Tardigrada #9467bd 1 100.0% 216 100.0% 216 0.19 0.0 59.6 0.0 52 0.3%