Mercurial > repos > galaxy-australia > ipa_hifi
comparison test-data/log.txt @ 0:f78303e25f3e draft
"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/ipa commit 835a903a68cae7f23fd35f3adc4af28b8f508a51"
| author | galaxy-australia |
|---|---|
| date | Wed, 08 Feb 2023 04:31:08 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:f78303e25f3e |
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| 1 INFO: /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa local --nthreads 1 --njobs 1 -i input.bam --only-print | |
| 2 INFO: ipa.py ipa (wrapper) version=1.8.0 ... Checking dependencies ... | |
| 3 INFO: Dependencies | |
| 4 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/python3 | |
| 5 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa2-task | |
| 6 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/falconc | |
| 7 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/minimap2 | |
| 8 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/nighthawk | |
| 9 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/pancake | |
| 10 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/pblayout | |
| 11 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/racon | |
| 12 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/samtools | |
| 13 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa_purge_dups | |
| 14 /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa_purge_dups_split_fa | |
| 15 snakemake version=7.21.0 | |
| 16 ipa2-task 1.8.0 (commit 89f9124a7aa07d170db0eb490c12a5aeb36bcf64) | |
| 17 Machine name: 'Linux' | |
| 18 Copyright (C) 2004-2021 Pacific Biosciences of California, Inc. | |
| 19 This program comes with ABSOLUTELY NO WARRANTY; it is intended for | |
| 20 Research Use Only and not for use in diagnostic procedures. | |
| 21 | |
| 22 falconc version=1.15.0+git., nim-version=1.2.0 | |
| 23 minimap2 version=2.24-r1122 | |
| 24 Nighthawk 1.0.0 (commit SL-release-10.2.0-11-g332ccaa) | |
| 25 pancake 1.6.0 (commit SL-release-10.2.0-175-gb750c42) | |
| 26 pblayout 1.4.0 (commit SL-release-10.2.0-64-gd59326a) | |
| 27 racon version=1.5.0 | |
| 28 samtools 1.15.1 | |
| 29 Using htslib 1.15.1 | |
| 30 ipa_purge_dups Version: 1.2.5 | |
| 31 |