Mercurial > repos > galaxy-australia > ipa_hifi
diff test-data/log.txt @ 0:f78303e25f3e draft
"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/ipa commit 835a903a68cae7f23fd35f3adc4af28b8f508a51"
| author | galaxy-australia |
|---|---|
| date | Wed, 08 Feb 2023 04:31:08 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/log.txt Wed Feb 08 04:31:08 2023 +0000 @@ -0,0 +1,31 @@ +INFO: /home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa local --nthreads 1 --njobs 1 -i input.bam --only-print +INFO: ipa.py ipa (wrapper) version=1.8.0 ... Checking dependencies ... +INFO: Dependencies +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/python3 +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa2-task +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/falconc +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/minimap2 +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/nighthawk +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/pancake +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/pblayout +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/racon +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/samtools +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa_purge_dups +/home/m.thang/anaconda3/envs/__pbipa@1.8.0/bin/ipa_purge_dups_split_fa +snakemake version=7.21.0 +ipa2-task 1.8.0 (commit 89f9124a7aa07d170db0eb490c12a5aeb36bcf64) + Machine name: 'Linux' +Copyright (C) 2004-2021 Pacific Biosciences of California, Inc. +This program comes with ABSOLUTELY NO WARRANTY; it is intended for +Research Use Only and not for use in diagnostic procedures. + +falconc version=1.15.0+git., nim-version=1.2.0 +minimap2 version=2.24-r1122 +Nighthawk 1.0.0 (commit SL-release-10.2.0-11-g332ccaa) +pancake 1.6.0 (commit SL-release-10.2.0-175-gb750c42) +pblayout 1.4.0 (commit SL-release-10.2.0-64-gd59326a) +racon version=1.5.0 +samtools 1.15.1 +Using htslib 1.15.1 +ipa_purge_dups Version: 1.2.5 +