Mercurial > repos > galaxyp > asms_tutorial_2016

annotate PeptideShaker_PSM_REPORT_to_NOVEL_peptides.ga @ 1:673718067538 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 16fc7b82dcada630bb8eba892679d46041e0efbb-dirty
author galaxyp
date Mon, 16 May 2016 09:16:49 -0400
parents 05ab719b9b93
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
2 "a_galaxy_workflow": "true",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
3 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
4 "format-version": "0.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
5 "name": "ASMS 2016: Session 3: Workflow for PeptideShaker PSM REPORT to NOVEL peptides",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
6 "steps": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
7 "0": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
8 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
9 "content_id": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
10 "id": 0,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
11 "input_connections": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
12 "inputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
13 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
14 "description": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
15 "name": "PSM REPORT from PeptideShaker Output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
16 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
17 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
18 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
19 "name": "Input dataset",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
20 "outputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
21 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
22 "left": 173.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
23 "top": 223.53125
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
24 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
25 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
26 "tool_id": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
27 "tool_state": "{\"name\": \"PSM REPORT from PeptideShaker Output\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
28 "tool_version": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
29 "type": "data_input",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
30 "uuid": "57ddf9d9-243a-494e-ab80-9e4e847b1bb3",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
31 "workflow_outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
32 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
33 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
34 "output_name": "output",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
35 "uuid": "b766949c-89c0-4596-90c9-5a7cc2e6ba9f"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
36 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
37 ]
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
38 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
39 "1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
40 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
41 "content_id": "Remove beginning1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
42 "id": 1,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
43 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
44 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
45 "id": 0,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
46 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
47 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
48 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
49 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
50 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
51 "name": "Remove beginning",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
52 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
53 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
54 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
55 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
56 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
57 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
58 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
59 "left": 358.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
60 "top": 341.03125
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
61 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
62 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
63 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
64 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
65 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
66 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
67 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
68 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
69 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
70 "tool_id": "Remove beginning1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
71 "tool_state": "{\"__page__\": 0, \"num_lines\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
72 "tool_version": "1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
73 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
74 "uuid": "39a390bf-a9ce-4b87-8003-67affe217cbc",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
75 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
76 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
77 "2": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
78 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
79 "content_id": "sort1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
80 "id": 2,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
81 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
82 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
83 "id": 1,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
84 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
85 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
86 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
87 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
88 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
89 "name": "Sort",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
90 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
91 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
92 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
93 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
94 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
95 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
96 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
97 "left": 357.0625,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
98 "top": 438.96875
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
99 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
100 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
101 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
102 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
103 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
104 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
105 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
106 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
107 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
108 "tool_id": "sort1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
109 "tool_state": "{\"__page__\": 0, \"style\": \"\\\"num\\\"\", \"column\": \"\\\"7\\\"\", \"__rerun_remap_job_id__\": null, \"order\": \"\\\"ASC\\\"\", \"input\": \"null\", \"column_set\": \"[{\\\"other_order\\\": \\\"DESC\\\", \\\"__index__\\\": 0, \\\"other_column\\\": \\\"19\\\", \\\"other_style\\\": \\\"num\\\"}]\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
110 "tool_version": "1.0.3",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
111 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
112 "uuid": "621fcb57-968e-40e1-b759-fdc2b5b7db49",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
113 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
114 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
115 "3": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
116 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
117 "content_id": "addValue",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
118 "id": 3,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
119 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
120 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
121 "id": 2,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
122 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
123 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
124 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
125 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
126 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
127 "name": "Add column",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
128 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
129 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
130 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
131 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
132 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
133 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
134 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
135 "left": 378.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
136 "top": 528
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
137 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
138 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
139 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
140 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
141 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
142 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
143 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
144 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
145 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
146 "tool_id": "addValue",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
147 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"exp\": \"\\\"1\\\"\", \"iterate\": \"\\\"yes\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
148 "tool_version": "1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
149 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
150 "uuid": "5587f07a-f6da-4125-a287-4850a65905d5",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
151 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
152 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
153 "4": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
154 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
155 "content_id": "Grouping1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
156 "id": 4,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
157 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
158 "input1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
159 "id": 3,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
160 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
161 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
162 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
163 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
164 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
165 "name": "Group",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
166 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
167 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
168 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
169 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
170 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
171 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
172 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
173 "left": 379.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
174 "top": 671.015625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
175 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
176 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
177 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
178 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
179 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
180 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
181 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
182 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
183 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
184 "tool_id": "Grouping1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
185 "tool_state": "{\"operations\": \"[{\\\"opcol\\\": \\\"21\\\", \\\"__index__\\\": 0, \\\"optype\\\": \\\"min\\\", \\\"opround\\\": \\\"no\\\"}]\", \"__page__\": 0, \"input1\": \"null\", \"ignorelines\": \"null\", \"groupcol\": \"\\\"7\\\"\", \"__rerun_remap_job_id__\": null, \"ignorecase\": \"\\\"False\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
186 "tool_version": "2.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
187 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
188 "uuid": "5f5ec71a-3e02-46b8-891c-53987abd52ce",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
189 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
190 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
191 "5": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
192 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
193 "content_id": "join1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
194 "id": 5,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
195 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
196 "input1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
197 "id": 3,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
198 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
199 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
200 "input2": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
201 "id": 4,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
202 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
203 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
204 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
205 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
206 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
207 "name": "Join two Datasets",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
208 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
209 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
210 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
211 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
212 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
213 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
214 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
215 "left": 603.09375,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
216 "top": 594.03125
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
217 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
218 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
219 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
220 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
221 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
222 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
223 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
224 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
225 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
226 "tool_id": "join1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
227 "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"field1\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"21\\\"}\", \"partial\": \"\\\"\\\"\", \"field2\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"2\\\"}\", \"__rerun_remap_job_id__\": null, \"fill_empty_columns\": \"{\\\"fill_empty_columns_switch\\\": \\\"no_fill\\\", \\\"__current_case__\\\": 0}\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input1\": \"null\", \"unmatched\": \"\\\"\\\"\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
228 "tool_version": "2.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
229 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
230 "uuid": "2d1ab280-cc31-4331-9442-50ed2c9e5ee7",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
231 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
232 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
233 "6": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
234 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
235 "content_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
236 "id": 6,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
237 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
238 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
239 "id": 5,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
240 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
241 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
242 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
243 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
244 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
245 "name": "Cut",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
246 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
247 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
248 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
249 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
250 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
251 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
252 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
253 "left": 384.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
254 "top": 804.015625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
255 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
256 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
257 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
258 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
259 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
260 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
261 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
262 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
263 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
264 "tool_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
265 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"delimiter\": \"\\\"T\\\"\", \"columnList\": \"\\\"c1-c21\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
266 "tool_version": "1.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
267 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
268 "uuid": "52912df8-4b48-4c2e-8a0d-6f587c6efea4",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
269 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
270 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
271 "7": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
272 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
273 "content_id": "Grep1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
274 "id": 7,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
275 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
276 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
277 "id": 6,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
278 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
279 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
280 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
281 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
282 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
283 "name": "Select",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
284 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
285 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
286 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
287 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
288 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
289 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
290 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
291 "left": 496.09375,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
292 "top": 916.015625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
293 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
294 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
295 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
296 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
297 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
298 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
299 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
300 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
301 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
302 "tool_id": "Grep1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
303 "tool_state": "{\"__page__\": 0, \"input\": \"null\", \"invert\": \"\\\"false\\\"\", \"__rerun_remap_job_id__\": null, \"pattern\": \"\\\"^\\\\\\\\d+\\\\\\\\tpr.B[^\\\\\\\\t,]*(, pr.B[^\\\\\\\\t,]*)*\\\\\\\\t.*$\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
304 "tool_version": "1.0.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
305 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
306 "uuid": "52423717-3315-490a-b695-2bb491dcdedf",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
307 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
308 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
309 "8": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
310 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
311 "content_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
312 "id": 8,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
313 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
314 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
315 "id": 7,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
316 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
317 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
318 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
319 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
320 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
321 "name": "Cut",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
322 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
323 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
324 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
325 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
326 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
327 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
328 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
329 "left": 886.0625,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
330 "top": 216.96875
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
331 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
332 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
333 "RenameDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
334 "action_arguments": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
335 "newname": "PSM REPORT of potential novel PEPTIDES"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
336 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
337 "action_type": "RenameDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
338 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
339 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
340 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
341 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
342 "tool_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
343 "tool_state": "{\"columnList\": \"\\\"c1-c20\\\"\", \"input\": \"null\", \"delimiter\": \"\\\"T\\\"\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
344 "tool_version": "1.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
345 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
346 "uuid": "b76031af-3ac7-4905-9727-5807b61f5478",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
347 "workflow_outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
348 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
349 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
350 "output_name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
351 "uuid": "e6bb92fb-57b2-4165-a0b8-eaae69762cf8"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
352 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
353 ]
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
354 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
355 "9": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
356 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
357 "content_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
358 "id": 9,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
359 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
360 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
361 "id": 7,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
362 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
363 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
364 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
365 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
366 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
367 "name": "Cut",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
368 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
369 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
370 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
371 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
372 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
373 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
374 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
375 "left": 551.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
376 "top": 1038
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
377 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
378 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
379 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
380 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
381 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
382 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
383 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
384 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
385 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
386 "tool_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
387 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"delimiter\": \"\\\"T\\\"\", \"columnList\": \"\\\"c3,c21\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
388 "tool_version": "1.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
389 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
390 "uuid": "a80ae099-7298-432d-9884-9e68248efe4e",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
391 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
392 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
393 "10": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
394 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
395 "content_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
396 "id": 10,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
397 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
398 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
399 "id": 8,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
400 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
401 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
402 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
403 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
404 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
405 "name": "Cut",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
406 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
407 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
408 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
409 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
410 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
411 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
412 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
413 "left": 893.0625,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
414 "top": 326.015625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
415 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
416 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
417 "RenameDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
418 "action_arguments": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
419 "newname": "Potential Novel PEPTIDES"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
420 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
421 "action_type": "RenameDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
422 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
423 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
424 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
425 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
426 "tool_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
427 "tool_state": "{\"columnList\": \"\\\"c3\\\"\", \"input\": \"null\", \"delimiter\": \"\\\"T\\\"\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
428 "tool_version": "1.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
429 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
430 "uuid": "08714c16-4992-429b-a719-eee903206f8e",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
431 "workflow_outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
432 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
433 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
434 "output_name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
435 "uuid": "97dcd310-1fee-43bc-ba96-e763c6146ffc"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
436 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
437 ]
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
438 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
439 "11": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
440 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
441 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
442 "id": 11,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
443 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
444 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
445 "id": 10,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
446 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
447 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
448 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
449 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
450 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
451 "name": "Tabular-to-FASTA",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
452 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
453 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
454 "name": "output",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
455 "type": "fasta"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
456 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
457 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
458 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
459 "left": 902.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
460 "top": 440
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
461 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
462 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
463 "HideDatasetActionoutput": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
464 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
465 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
466 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
467 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
468 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
469 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
470 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
471 "tool_state": "{\"title_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": [\\\"1\\\"]}\", \"__page__\": 0, \"seq_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
472 "tool_version": "1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
473 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
474 "uuid": "2903a6de-b7c6-4b1d-84bb-df4423471748",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
475 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
476 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
477 "12": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
478 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
479 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_compute_length/fasta_compute_length/1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
480 "id": 12,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
481 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
482 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
483 "id": 11,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
484 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
485 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
486 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
487 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
488 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
489 "name": "Compute sequence length",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
490 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
491 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
492 "name": "output",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
493 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
494 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
495 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
496 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
497 "left": 857.125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
498 "top": 564.015625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
499 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
500 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
501 "HideDatasetActionoutput": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
502 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
503 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
504 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
505 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
506 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
507 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
508 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_compute_length/fasta_compute_length/1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
509 "tool_state": "{\"__page__\": 0, \"keep_first\": \"\\\"0\\\"\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"__rerun_remap_job_id__\": null}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
510 "tool_version": "1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
511 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
512 "uuid": "f9da80f6-6a7e-4800-bbef-393632c3b89a",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
513 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
514 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
515 "13": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
516 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
517 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
518 "id": 13,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
519 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
520 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
521 "id": 12,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
522 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
523 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
524 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
525 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
526 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
527 "name": "Tabular-to-FASTA",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
528 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
529 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
530 "name": "output",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
531 "type": "fasta"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
532 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
533 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
534 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
535 "left": 886.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
536 "top": 704
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
537 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
538 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
539 "HideDatasetActionoutput": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
540 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
541 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
542 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
543 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
544 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
545 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
546 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
547 "tool_state": "{\"title_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": [\\\"1\\\", \\\"2\\\"]}\", \"__page__\": 0, \"seq_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
548 "tool_version": "1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
549 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
550 "uuid": "ef2c69a2-4b1e-4694-b264-b0d69cdd3212",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
551 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
552 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
553 "14": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
554 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
555 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
556 "id": 14,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
557 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
558 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
559 "id": 13,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
560 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
561 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
562 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
563 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
564 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
565 "name": "Filter sequences by length",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
566 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
567 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
568 "name": "output",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
569 "type": "fasta"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
570 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
571 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
572 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
573 "left": 888.0625,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
574 "top": 842.96875
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
575 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
576 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
577 "HideDatasetActionoutput": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
578 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
579 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
580 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
581 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
582 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
583 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
584 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
585 "tool_state": "{\"__page__\": 0, \"min_length\": \"\\\"8\\\"\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"max_length\": \"\\\"30\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
586 "tool_version": "1.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
587 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
588 "uuid": "f1ede0d2-305b-49a3-8d75-4e43963d95cf",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
589 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
590 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
591 "15": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
592 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
593 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
594 "id": 15,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
595 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
596 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
597 "id": 13,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
598 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
599 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
600 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
601 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
602 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
603 "name": "Filter sequences by length",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
604 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
605 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
606 "name": "output",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
607 "type": "fasta"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
608 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
609 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
610 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
611 "left": 1163.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
612 "top": 842.46875
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
613 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
614 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
615 "HideDatasetActionoutput": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
616 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
617 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
618 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
619 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
620 "RenameDatasetActionoutput": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
621 "action_arguments": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
622 "newname": "FASTA file with peptides with length greater than 30 aas"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
623 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
624 "action_type": "RenameDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
625 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
626 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
627 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
628 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
629 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
630 "tool_state": "{\"__page__\": 0, \"input\": \"null\", \"__rerun_remap_job_id__\": null, \"max_length\": \"\\\"50\\\"\", \"min_length\": \"\\\"31\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
631 "tool_version": "1.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
632 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
633 "uuid": "fa317af8-ed94-41b9-b6b8-74445dd86ef7",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
634 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
635 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
636 "16": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
637 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
638 "content_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
639 "id": 16,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
640 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
641 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
642 "id": 14,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
643 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
644 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
645 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
646 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
647 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
648 "name": "Regex Find And Replace",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
649 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
650 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
651 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
652 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
653 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
654 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
655 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
656 "left": 924.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
657 "top": 1055
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
658 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
659 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
660 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
661 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
662 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
663 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
664 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
665 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
666 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
667 "tool_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
668 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"checks\": \"[{\\\"__index__\\\": 0, \\\"replacement\\\": \\\"\\\\\\\\1 sequence length=\\\\\\\\2 aa\\\", \\\"pattern\\\": \\\"^(>.*)_([0-9]+)$\\\"}]\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
669 "tool_version": "0.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
670 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
671 "uuid": "696021fc-c7d2-4e47-8c28-252c394b49c4",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
672 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
673 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
674 "17": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
675 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
676 "content_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
677 "id": 17,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
678 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
679 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
680 "id": 15,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
681 "output_name": "output"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
682 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
683 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
684 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
685 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
686 "name": "Regex Find And Replace",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
687 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
688 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
689 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
690 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
691 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
692 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
693 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
694 "left": 1199.71875,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
695 "top": 1049
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
696 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
697 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
698 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
699 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
700 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
701 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
702 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
703 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
704 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
705 "tool_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
706 "tool_state": "{\"input\": \"null\", \"__rerun_remap_job_id__\": null, \"checks\": \"[{\\\"__index__\\\": 0, \\\"replacement\\\": \\\"\\\\\\\\1 sequence length=\\\\\\\\2 aa\\\", \\\"pattern\\\": \\\"^(>.*)_([0-9]+)$\\\"}]\", \"__page__\": 0}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
707 "tool_version": "0.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
708 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
709 "uuid": "aff244a8-5208-478f-a647-2b13542af873",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
710 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
711 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
712 "18": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
713 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
714 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
715 "id": 18,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
716 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
717 "query": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
718 "id": 16,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
719 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
720 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
721 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
722 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
723 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
724 "name": "NCBI BLAST+ remote blastp",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
725 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
726 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
727 "name": "output_tabular",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
728 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
729 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
730 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
731 "name": "output_xml",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
732 "type": "blastxml"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
733 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
734 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
735 "name": "output_txt",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
736 "type": "txt"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
737 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
738 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
739 "name": "output_html",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
740 "type": "html"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
741 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
742 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
743 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
744 "left": 1290.078125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
745 "top": 200
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
746 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
747 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
748 "HideDatasetActionoutput_html": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
749 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
750 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
751 "output_name": "output_html"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
752 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
753 "HideDatasetActionoutput_tabular": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
754 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
755 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
756 "output_name": "output_tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
757 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
758 "HideDatasetActionoutput_txt": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
759 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
760 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
761 "output_name": "output_txt"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
762 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
763 "HideDatasetActionoutput_xml": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
764 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
765 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
766 "output_name": "output_xml"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
767 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
768 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
769 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
770 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
771 "tool_state": "{\"evalue_cutoff\": \"\\\"200000.0\\\"\", \"__page__\": 0, \"adv_opts\": \"{\\\"scoring\\\": {\\\"gap_costs\\\": \\\"-gapopen 9 -gapextend 1\\\", \\\"matrix\\\": \\\"PAM30\\\", \\\"__current_case__\\\": 7}, \\\"use_sw_tback\\\": \\\"False\\\", \\\"window_size\\\": \\\"15\\\", \\\"adv_opts_selector\\\": \\\"advanced\\\", \\\"comp_based_stats\\\": \\\"0\\\", \\\"parse_deflines\\\": \\\"True\\\", \\\"filter_query\\\": \\\"False\\\", \\\"word_size\\\": \\\"2\\\", \\\"__current_case__\\\": 1, \\\"threshold\\\": \\\"16\\\"}\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"db_opts\": \"{\\\"db_opts_selector\\\": \\\"remote\\\", \\\"taxid_repeat\\\": [{\\\"__index__\\\": 0, \\\"taxid\\\": \\\"10090\\\", \\\"exclude\\\": \\\"False\\\"}], \\\"__current_case__\\\": 2, \\\"database\\\": \\\"nr\\\"}\", \"blast_type\": \"\\\"blastp-short\\\"\", \"fmt_opt\": \"{\\\"out_format\\\": \\\"blastxml\\\", \\\"outfmt\\\": \\\"5\\\", \\\"max_target_seqs\\\": \\\"1\\\", \\\"__current_case__\\\": 1}\", \"query\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
772 "tool_version": "1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
773 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
774 "uuid": "0623c7ec-4140-4364-a4bd-f7ea9629b631",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
775 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
776 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
777 "19": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
778 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
779 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
780 "id": 19,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
781 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
782 "query": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
783 "id": 17,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
784 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
785 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
786 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
787 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
788 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
789 "name": "NCBI BLAST+ remote blastp",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
790 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
791 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
792 "name": "output_tabular",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
793 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
794 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
795 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
796 "name": "output_xml",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
797 "type": "blastxml"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
798 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
799 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
800 "name": "output_txt",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
801 "type": "txt"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
802 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
803 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
804 "name": "output_html",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
805 "type": "html"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
806 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
807 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
808 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
809 "left": 1423.21875,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
810 "top": 1050
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
811 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
812 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
813 "HideDatasetActionoutput_html": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
814 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
815 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
816 "output_name": "output_html"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
817 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
818 "HideDatasetActionoutput_tabular": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
819 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
820 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
821 "output_name": "output_tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
822 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
823 "HideDatasetActionoutput_txt": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
824 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
825 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
826 "output_name": "output_txt"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
827 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
828 "HideDatasetActionoutput_xml": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
829 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
830 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
831 "output_name": "output_xml"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
832 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
833 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
834 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
835 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
836 "tool_state": "{\"evalue_cutoff\": \"\\\"10.0\\\"\", \"__page__\": 0, \"adv_opts\": \"{\\\"scoring\\\": {\\\"gap_costs\\\": \\\"-gapopen 11 -gapextend 1\\\", \\\"matrix\\\": \\\"BLOSUM62\\\", \\\"__current_case__\\\": 2}, \\\"use_sw_tback\\\": \\\"False\\\", \\\"window_size\\\": \\\"40\\\", \\\"adv_opts_selector\\\": \\\"advanced\\\", \\\"comp_based_stats\\\": \\\"2\\\", \\\"parse_deflines\\\": \\\"True\\\", \\\"filter_query\\\": \\\"False\\\", \\\"word_size\\\": \\\"3\\\", \\\"__current_case__\\\": 1, \\\"threshold\\\": \\\"11\\\"}\", \"__rerun_remap_job_id__\": null, \"db_opts\": \"{\\\"db_opts_selector\\\": \\\"remote\\\", \\\"taxid_repeat\\\": [{\\\"__index__\\\": 0, \\\"taxid\\\": \\\"10090\\\", \\\"exclude\\\": \\\"False\\\"}], \\\"__current_case__\\\": 2, \\\"database\\\": \\\"nr\\\"}\", \"blast_type\": \"\\\"blastp\\\"\", \"fmt_opt\": \"{\\\"out_format\\\": \\\"blastxml\\\", \\\"outfmt\\\": \\\"5\\\", \\\"max_target_seqs\\\": \\\"1\\\", \\\"__current_case__\\\": 1}\", \"query\": \"null\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
837 "tool_version": "1.0.1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
838 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
839 "uuid": "bbca1b78-3170-44fe-ae0f-b727377987cc",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
840 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
841 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
842 "20": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
843 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
844 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
845 "id": 20,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
846 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
847 "blastxml_file": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
848 "id": 18,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
849 "output_name": "output_xml"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
850 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
851 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
852 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
853 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
854 "name": "BLAST XML to selected tabular columns",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
855 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
856 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
857 "name": "tabular_file",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
858 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
859 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
860 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
861 "name": "unmatched_file",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
862 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
863 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
864 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
865 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
866 "left": 1265.0625,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
867 "top": 375
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
868 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
869 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
870 "HideDatasetActiontabular_file": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
871 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
872 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
873 "output_name": "tabular_file"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
874 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
875 "HideDatasetActionunmatched_file": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
876 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
877 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
878 "output_name": "unmatched_file"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
879 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
880 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
881 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
882 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
883 "tool_state": "{\"__page__\": 0, \"qdef\": \"\\\"False\\\"\", \"blastxml_file\": \"null\", \"__rerun_remap_job_id__\": null, \"maxhits\": \"\\\"1\\\"\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"allqueries\": \"\\\"False\\\"\", \"output\": \"{\\\"out_format\\\": \\\"cols\\\", \\\"columns\\\": [\\\"qseqid\\\", \\\"sseqid\\\", \\\"pident\\\", \\\"length\\\", \\\"mismatch\\\", \\\"gapopen\\\", \\\"qstart\\\", \\\"qend\\\", \\\"sstart\\\", \\\"send\\\", \\\"evalue\\\", \\\"bitscore\\\", \\\"sallseqid\\\", \\\"score\\\", \\\"nident\\\", \\\"positive\\\", \\\"gaps\\\", \\\"ppos\\\", \\\"qframe\\\", \\\"sframe\\\", \\\"qseq\\\", \\\"sseq\\\", \\\"qlen\\\", \\\"slen\\\"], \\\"__current_case__\\\": 2}\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"maxhsps\": \"\\\"1\\\"\", \"unmatched\": \"\\\"True\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
884 "tool_version": "1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
885 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
886 "uuid": "3a9c02cf-45ec-42ab-84e2-4544e252e832",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
887 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
888 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
889 "21": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
890 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
891 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
892 "id": 21,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
893 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
894 "blastxml_file": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
895 "id": 19,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
896 "output_name": "output_xml"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
897 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
898 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
899 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
900 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
901 "name": "BLAST XML to selected tabular columns",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
902 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
903 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
904 "name": "tabular_file",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
905 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
906 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
907 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
908 "name": "unmatched_file",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
909 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
910 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
911 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
912 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
913 "left": 1677.578125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
914 "top": 1049.265625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
915 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
916 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
917 "HideDatasetActiontabular_file": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
918 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
919 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
920 "output_name": "tabular_file"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
921 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
922 "HideDatasetActionunmatched_file": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
923 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
924 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
925 "output_name": "unmatched_file"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
926 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
927 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
928 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
929 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
930 "tool_state": "{\"__page__\": 0, \"qdef\": \"\\\"False\\\"\", \"blastxml_file\": \"null\", \"__rerun_remap_job_id__\": null, \"maxhits\": \"\\\"1\\\"\", \"unmatched\": \"\\\"True\\\"\", \"allqueries\": \"\\\"False\\\"\", \"output\": \"{\\\"out_format\\\": \\\"cols\\\", \\\"columns\\\": [\\\"qseqid\\\", \\\"sseqid\\\", \\\"pident\\\", \\\"length\\\", \\\"mismatch\\\", \\\"gapopen\\\", \\\"qstart\\\", \\\"qend\\\", \\\"sstart\\\", \\\"send\\\", \\\"evalue\\\", \\\"bitscore\\\", \\\"sallseqid\\\", \\\"score\\\", \\\"nident\\\", \\\"positive\\\", \\\"gaps\\\", \\\"ppos\\\", \\\"qframe\\\", \\\"sframe\\\", \\\"qseq\\\", \\\"sseq\\\", \\\"qlen\\\", \\\"slen\\\"], \\\"__current_case__\\\": 2}\", \"maxhsps\": \"\\\"1\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
931 "tool_version": "1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
932 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
933 "uuid": "c534ca6c-2876-4f62-b9e9-a164f3829bd2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
934 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
935 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
936 "22": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
937 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
938 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
939 "id": 22,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
940 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
941 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
942 "id": 20,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
943 "output_name": "tabular_file"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
944 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
945 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
946 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
947 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
948 "name": "Compute",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
949 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
950 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
951 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
952 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
953 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
954 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
955 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
956 "left": 1350.09375,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
957 "top": 532.015625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
958 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
959 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
960 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
961 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
962 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
963 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
964 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
965 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
966 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
967 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
968 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"cond\": \"\\\"(c4/c23)*100\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"round\": \"\\\"no\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
969 "tool_version": "1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
970 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
971 "uuid": "1b02fcdc-b9dc-4497-8eba-2b79f81b2168",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
972 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
973 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
974 "23": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
975 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
976 "content_id": "Filter1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
977 "id": 23,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
978 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
979 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
980 "id": 22,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
981 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
982 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
983 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
984 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
985 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
986 "name": "Filter",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
987 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
988 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
989 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
990 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
991 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
992 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
993 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
994 "left": 1364.09375,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
995 "top": 635.015625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
996 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
997 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
998 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
999 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1000 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1001 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1002 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1003 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1004 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1005 "tool_id": "Filter1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1006 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"cond\": \"\\\"c3<100 or c17>=1 or c25<100\\\"\", \"input\": \"null\", \"header_lines\": \"\\\"0\\\"\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1007 "tool_version": "1.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1008 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1009 "uuid": "58e54e01-c935-46e9-9b3f-8d91dc157c36",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1010 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1011 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1012 "24": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1013 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1014 "content_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1015 "id": 24,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1016 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1017 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1018 "id": 23,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1019 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1020 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1021 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1022 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1023 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1024 "name": "Cut",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1025 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1026 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1027 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1028 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1029 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1030 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1031 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1032 "left": 1376.09375,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1033 "top": 750.03125
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1034 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1035 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1036 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1037 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1038 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1039 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1040 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1041 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1042 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1043 "tool_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1044 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"delimiter\": \"\\\"T\\\"\", \"columnList\": \"\\\"c1\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1045 "tool_version": "1.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1046 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1047 "uuid": "a1fdb8b9-dcb0-4c6c-97dd-d6e2373f1421",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1048 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1049 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1050 "25": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1051 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1052 "content_id": "cat1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1053 "id": 25,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1054 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1055 "input1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1056 "id": 20,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1057 "output_name": "unmatched_file"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1058 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1059 "queries_0|input2": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1060 "id": 24,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1061 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1062 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1063 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1064 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1065 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1066 "name": "Concatenate datasets",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1067 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1068 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1069 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1070 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1071 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1072 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1073 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1074 "left": 1588.0625,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1075 "top": 602
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1076 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1077 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1078 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1079 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1080 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1081 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1082 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1083 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1084 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1085 "tool_id": "cat1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1086 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"input1\": \"null\", \"queries\": \"[{\\\"input2\\\": null, \\\"__index__\\\": 0}]\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1087 "tool_version": "1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1088 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1089 "uuid": "64b3b833-6d3a-4aaa-b666-1206fea216d9",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1090 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1091 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1092 "26": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1093 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1094 "content_id": "cat1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1095 "id": 26,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1096 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1097 "input1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1098 "id": 25,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1099 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1100 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1101 "queries_0|input2": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1102 "id": 21,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1103 "output_name": "unmatched_file"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1104 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1105 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1106 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1107 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1108 "name": "Concatenate datasets",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1109 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1110 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1111 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1112 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1113 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1114 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1115 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1116 "left": 1894.578125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1117 "top": 805.265625
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1118 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1119 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1120 "RenameDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1121 "action_arguments": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1122 "newname": "PEPTIDES corresponding to novel proteoforms"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1123 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1124 "action_type": "RenameDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1125 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1126 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1127 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1128 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1129 "tool_id": "cat1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1130 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"input1\": \"null\", \"queries\": \"[{\\\"input2\\\": null, \\\"__index__\\\": 0}]\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1131 "tool_version": "1.0.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1132 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1133 "uuid": "52f35f03-ba84-4f80-b8fc-2696e7035efe",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1134 "workflow_outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1135 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1136 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1137 "output_name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1138 "uuid": "65f5d2f4-6d95-4085-af01-c0b3e65f454a"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1139 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1140 ]
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1141 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1142 "27": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1143 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1144 "content_id": "join1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1145 "id": 27,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1146 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1147 "input1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1148 "id": 26,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1149 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1150 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1151 "input2": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1152 "id": 9,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1153 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1154 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1155 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1156 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1157 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1158 "name": "Join two Datasets",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1159 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1160 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1161 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1162 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1163 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1164 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1165 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1166 "left": 1937.96875,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1167 "top": 205.9375
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1168 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1169 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1170 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1171 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1172 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1173 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1174 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1175 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1176 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1177 "tool_id": "join1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1178 "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"field1\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"partial\": \"\\\"\\\"\", \"field2\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"__rerun_remap_job_id__\": null, \"fill_empty_columns\": \"{\\\"fill_empty_columns_switch\\\": \\\"no_fill\\\", \\\"__current_case__\\\": 0}\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input1\": \"null\", \"unmatched\": \"\\\"\\\"\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1179 "tool_version": "2.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1180 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1181 "uuid": "447ad2ac-0485-4f64-a225-ba8720f8e3fd",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1182 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1183 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1184 "28": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1185 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1186 "content_id": "Grouping1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1187 "id": 28,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1188 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1189 "input1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1190 "id": 27,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1191 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1192 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1193 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1194 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1195 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1196 "name": "Group",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1197 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1198 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1199 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1200 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1201 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1202 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1203 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1204 "left": 2038.875,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1205 "top": 359.28125
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1206 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1207 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1208 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1209 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1210 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1211 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1212 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1213 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1214 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1215 "tool_id": "Grouping1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1216 "tool_state": "{\"operations\": \"[{\\\"opcol\\\": \\\"3\\\", \\\"__index__\\\": 0, \\\"optype\\\": \\\"min\\\", \\\"opround\\\": \\\"no\\\"}]\", \"__page__\": 0, \"input1\": \"null\", \"ignorelines\": \"null\", \"groupcol\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"ignorecase\": \"\\\"False\\\"\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1217 "tool_version": "2.1.0",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1218 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1219 "uuid": "e8b67b52-e50e-4d9d-a83c-2f89a4f4f53d",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1220 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1221 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1222 "29": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1223 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1224 "content_id": "join1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1225 "id": 29,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1226 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1227 "input1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1228 "id": 7,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1229 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1230 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1231 "input2": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1232 "id": 28,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1233 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1234 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1235 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1236 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1237 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1238 "name": "Join two Datasets",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1239 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1240 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1241 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1242 "type": "input"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1243 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1244 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1245 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1246 "left": 1855.0625,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1247 "top": 378.96875
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1248 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1249 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1250 "HideDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1251 "action_arguments": {},
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1252 "action_type": "HideDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1253 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1254 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1255 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1256 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1257 "tool_id": "join1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1258 "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"field1\": \"\\\"21\\\"\", \"partial\": \"\\\"\\\"\", \"field2\": \"\\\"2\\\"\", \"__rerun_remap_job_id__\": null, \"fill_empty_columns\": \"{\\\"fill_empty_columns_switch\\\": \\\"no_fill\\\", \\\"__current_case__\\\": 0}\", \"unmatched\": \"\\\"\\\"\", \"input1\": \"null\"}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1259 "tool_version": "2.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1260 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1261 "uuid": "cef8aa6f-66a1-4ceb-adb2-ad2a11d50f33",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1262 "workflow_outputs": []
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1263 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1264 "30": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1265 "annotation": "",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1266 "content_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1267 "id": 30,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1268 "input_connections": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1269 "input": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1270 "id": 29,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1271 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1272 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1273 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1274 "inputs": [],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1275 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1276 "name": "Cut",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1277 "outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1278 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1279 "name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1280 "type": "tabular"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1281 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1282 ],
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1283 "position": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1284 "left": 2116.03125,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1285 "top": 520
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1286 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1287 "post_job_actions": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1288 "RenameDatasetActionout_file1": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1289 "action_arguments": {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1290 "newname": "PSM REPORT of PEPTIDES corresponding to novel proteoforms"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1291 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1292 "action_type": "RenameDatasetAction",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1293 "output_name": "out_file1"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1294 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1295 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1296 "tool_errors": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1297 "tool_id": "Cut1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1298 "tool_state": "{\"columnList\": \"\\\"c1-c20\\\"\", \"input\": \"null\", \"delimiter\": \"\\\"T\\\"\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1299 "tool_version": "1.0.2",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1300 "type": "tool",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1301 "uuid": "dd3616b1-17fb-403c-86c5-49364a33dfa6",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1302 "workflow_outputs": [
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1303 {
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1304 "label": null,
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1305 "output_name": "out_file1",
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1306 "uuid": "95e9b117-1291-4787-b3f3-ca968f15178d"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1307 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1308 ]
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1309 }
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1310 },
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1311 "uuid": "19b7ca0f-ca39-496a-b727-af2b6b63d7e7"
05ab719b9b93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff changeset
1312 }