Mercurial > repos > galaxyp > asms_tutorial_2016
annotate PeptideShaker_PSM_REPORT_to_NOVEL_peptides.ga @ 1:673718067538 draft default tip
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 16fc7b82dcada630bb8eba892679d46041e0efbb-dirty
author | galaxyp |
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date | Mon, 16 May 2016 09:16:49 -0400 |
parents | 05ab719b9b93 |
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05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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changeset
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1 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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2 "a_galaxy_workflow": "true", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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3 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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diff
changeset
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4 "format-version": "0.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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5 "name": "ASMS 2016: Session 3: Workflow for PeptideShaker PSM REPORT to NOVEL peptides", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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6 "steps": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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7 "0": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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8 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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9 "content_id": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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diff
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10 "id": 0, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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diff
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11 "input_connections": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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12 "inputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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13 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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14 "description": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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15 "name": "PSM REPORT from PeptideShaker Output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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16 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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17 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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diff
changeset
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18 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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19 "name": "Input dataset", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
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20 "outputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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21 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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22 "left": 173.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
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23 "top": 223.53125 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
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24 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
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25 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
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26 "tool_id": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
27 "tool_state": "{\"name\": \"PSM REPORT from PeptideShaker Output\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
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28 "tool_version": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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29 "type": "data_input", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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30 "uuid": "57ddf9d9-243a-494e-ab80-9e4e847b1bb3", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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diff
changeset
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31 "workflow_outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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32 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
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33 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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34 "output_name": "output", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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35 "uuid": "b766949c-89c0-4596-90c9-5a7cc2e6ba9f" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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36 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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37 ] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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38 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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39 "1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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40 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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41 "content_id": "Remove beginning1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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42 "id": 1, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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diff
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43 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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44 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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45 "id": 0, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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46 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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47 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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48 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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49 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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50 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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51 "name": "Remove beginning", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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52 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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53 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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54 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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55 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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56 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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57 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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58 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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59 "left": 358.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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60 "top": 341.03125 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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61 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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62 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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63 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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64 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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65 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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66 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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67 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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68 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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69 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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70 "tool_id": "Remove beginning1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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71 "tool_state": "{\"__page__\": 0, \"num_lines\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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72 "tool_version": "1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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73 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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74 "uuid": "39a390bf-a9ce-4b87-8003-67affe217cbc", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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75 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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76 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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77 "2": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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78 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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79 "content_id": "sort1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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80 "id": 2, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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81 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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82 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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83 "id": 1, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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84 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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85 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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86 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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87 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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88 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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89 "name": "Sort", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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90 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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91 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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92 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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93 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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94 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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95 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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96 "position": { |
05ab719b9b93
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galaxyp
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97 "left": 357.0625, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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98 "top": 438.96875 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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99 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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100 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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101 "HideDatasetActionout_file1": { |
05ab719b9b93
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102 "action_arguments": {}, |
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103 "action_type": "HideDatasetAction", |
05ab719b9b93
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104 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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105 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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106 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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107 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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108 "tool_id": "sort1", |
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109 "tool_state": "{\"__page__\": 0, \"style\": \"\\\"num\\\"\", \"column\": \"\\\"7\\\"\", \"__rerun_remap_job_id__\": null, \"order\": \"\\\"ASC\\\"\", \"input\": \"null\", \"column_set\": \"[{\\\"other_order\\\": \\\"DESC\\\", \\\"__index__\\\": 0, \\\"other_column\\\": \\\"19\\\", \\\"other_style\\\": \\\"num\\\"}]\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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110 "tool_version": "1.0.3", |
05ab719b9b93
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111 "type": "tool", |
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112 "uuid": "621fcb57-968e-40e1-b759-fdc2b5b7db49", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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113 "workflow_outputs": [] |
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114 }, |
05ab719b9b93
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115 "3": { |
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116 "annotation": "", |
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117 "content_id": "addValue", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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118 "id": 3, |
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119 "input_connections": { |
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120 "input": { |
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121 "id": 2, |
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122 "output_name": "out_file1" |
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123 } |
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galaxyp
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124 }, |
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125 "inputs": [], |
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126 "label": null, |
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127 "name": "Add column", |
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128 "outputs": [ |
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129 { |
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130 "name": "out_file1", |
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131 "type": "input" |
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132 } |
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133 ], |
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134 "position": { |
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135 "left": 378.078125, |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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136 "top": 528 |
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137 }, |
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138 "post_job_actions": { |
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139 "HideDatasetActionout_file1": { |
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140 "action_arguments": {}, |
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141 "action_type": "HideDatasetAction", |
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142 "output_name": "out_file1" |
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143 } |
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144 }, |
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145 "tool_errors": null, |
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146 "tool_id": "addValue", |
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147 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"exp\": \"\\\"1\\\"\", \"iterate\": \"\\\"yes\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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148 "tool_version": "1.0.0", |
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149 "type": "tool", |
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150 "uuid": "5587f07a-f6da-4125-a287-4850a65905d5", |
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151 "workflow_outputs": [] |
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152 }, |
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galaxyp
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153 "4": { |
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154 "annotation": "", |
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155 "content_id": "Grouping1", |
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156 "id": 4, |
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157 "input_connections": { |
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158 "input1": { |
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159 "id": 3, |
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160 "output_name": "out_file1" |
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161 } |
05ab719b9b93
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162 }, |
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163 "inputs": [], |
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164 "label": null, |
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165 "name": "Group", |
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166 "outputs": [ |
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167 { |
05ab719b9b93
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168 "name": "out_file1", |
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169 "type": "tabular" |
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170 } |
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171 ], |
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172 "position": { |
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galaxyp
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173 "left": 379.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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174 "top": 671.015625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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175 }, |
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176 "post_job_actions": { |
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177 "HideDatasetActionout_file1": { |
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178 "action_arguments": {}, |
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179 "action_type": "HideDatasetAction", |
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180 "output_name": "out_file1" |
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181 } |
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182 }, |
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183 "tool_errors": null, |
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184 "tool_id": "Grouping1", |
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185 "tool_state": "{\"operations\": \"[{\\\"opcol\\\": \\\"21\\\", \\\"__index__\\\": 0, \\\"optype\\\": \\\"min\\\", \\\"opround\\\": \\\"no\\\"}]\", \"__page__\": 0, \"input1\": \"null\", \"ignorelines\": \"null\", \"groupcol\": \"\\\"7\\\"\", \"__rerun_remap_job_id__\": null, \"ignorecase\": \"\\\"False\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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186 "tool_version": "2.1.0", |
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187 "type": "tool", |
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188 "uuid": "5f5ec71a-3e02-46b8-891c-53987abd52ce", |
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189 "workflow_outputs": [] |
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190 }, |
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191 "5": { |
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192 "annotation": "", |
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193 "content_id": "join1", |
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194 "id": 5, |
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195 "input_connections": { |
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196 "input1": { |
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197 "id": 3, |
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198 "output_name": "out_file1" |
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199 }, |
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200 "input2": { |
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201 "id": 4, |
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202 "output_name": "out_file1" |
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203 } |
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204 }, |
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205 "inputs": [], |
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206 "label": null, |
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207 "name": "Join two Datasets", |
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208 "outputs": [ |
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209 { |
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210 "name": "out_file1", |
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211 "type": "input" |
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212 } |
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213 ], |
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214 "position": { |
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215 "left": 603.09375, |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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216 "top": 594.03125 |
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217 }, |
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218 "post_job_actions": { |
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219 "HideDatasetActionout_file1": { |
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220 "action_arguments": {}, |
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221 "action_type": "HideDatasetAction", |
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222 "output_name": "out_file1" |
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223 } |
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224 }, |
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225 "tool_errors": null, |
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226 "tool_id": "join1", |
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227 "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"field1\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"21\\\"}\", \"partial\": \"\\\"\\\"\", \"field2\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"2\\\"}\", \"__rerun_remap_job_id__\": null, \"fill_empty_columns\": \"{\\\"fill_empty_columns_switch\\\": \\\"no_fill\\\", \\\"__current_case__\\\": 0}\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input1\": \"null\", \"unmatched\": \"\\\"\\\"\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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228 "tool_version": "2.0.2", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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229 "type": "tool", |
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galaxyp
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230 "uuid": "2d1ab280-cc31-4331-9442-50ed2c9e5ee7", |
05ab719b9b93
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231 "workflow_outputs": [] |
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232 }, |
05ab719b9b93
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233 "6": { |
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234 "annotation": "", |
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235 "content_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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236 "id": 6, |
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237 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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238 "input": { |
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239 "id": 5, |
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240 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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241 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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242 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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243 "inputs": [], |
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244 "label": null, |
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245 "name": "Cut", |
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246 "outputs": [ |
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247 { |
05ab719b9b93
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248 "name": "out_file1", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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249 "type": "tabular" |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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250 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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251 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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252 "position": { |
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galaxyp
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253 "left": 384.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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254 "top": 804.015625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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255 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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256 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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257 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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258 "action_arguments": {}, |
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259 "action_type": "HideDatasetAction", |
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260 "output_name": "out_file1" |
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261 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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262 }, |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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263 "tool_errors": null, |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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264 "tool_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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265 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"delimiter\": \"\\\"T\\\"\", \"columnList\": \"\\\"c1-c21\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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266 "tool_version": "1.0.2", |
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267 "type": "tool", |
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268 "uuid": "52912df8-4b48-4c2e-8a0d-6f587c6efea4", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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269 "workflow_outputs": [] |
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270 }, |
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271 "7": { |
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272 "annotation": "", |
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273 "content_id": "Grep1", |
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274 "id": 7, |
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275 "input_connections": { |
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276 "input": { |
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277 "id": 6, |
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278 "output_name": "out_file1" |
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279 } |
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280 }, |
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281 "inputs": [], |
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282 "label": null, |
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283 "name": "Select", |
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284 "outputs": [ |
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285 { |
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286 "name": "out_file1", |
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287 "type": "input" |
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288 } |
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289 ], |
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290 "position": { |
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291 "left": 496.09375, |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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292 "top": 916.015625 |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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293 }, |
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294 "post_job_actions": { |
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295 "HideDatasetActionout_file1": { |
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296 "action_arguments": {}, |
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297 "action_type": "HideDatasetAction", |
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298 "output_name": "out_file1" |
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299 } |
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300 }, |
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301 "tool_errors": null, |
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302 "tool_id": "Grep1", |
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303 "tool_state": "{\"__page__\": 0, \"input\": \"null\", \"invert\": \"\\\"false\\\"\", \"__rerun_remap_job_id__\": null, \"pattern\": \"\\\"^\\\\\\\\d+\\\\\\\\tpr.B[^\\\\\\\\t,]*(, pr.B[^\\\\\\\\t,]*)*\\\\\\\\t.*$\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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304 "tool_version": "1.0.1", |
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305 "type": "tool", |
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galaxyp
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306 "uuid": "52423717-3315-490a-b695-2bb491dcdedf", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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307 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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308 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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309 "8": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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310 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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311 "content_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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312 "id": 8, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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313 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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314 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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315 "id": 7, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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316 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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317 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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318 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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319 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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320 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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321 "name": "Cut", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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322 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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323 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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324 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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325 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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326 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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327 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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328 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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329 "left": 886.0625, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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330 "top": 216.96875 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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331 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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332 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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333 "RenameDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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334 "action_arguments": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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335 "newname": "PSM REPORT of potential novel PEPTIDES" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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336 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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337 "action_type": "RenameDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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338 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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339 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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340 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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341 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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342 "tool_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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343 "tool_state": "{\"columnList\": \"\\\"c1-c20\\\"\", \"input\": \"null\", \"delimiter\": \"\\\"T\\\"\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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344 "tool_version": "1.0.2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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345 "type": "tool", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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346 "uuid": "b76031af-3ac7-4905-9727-5807b61f5478", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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347 "workflow_outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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348 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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349 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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350 "output_name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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|
351 "uuid": "e6bb92fb-57b2-4165-a0b8-eaae69762cf8" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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352 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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353 ] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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354 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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355 "9": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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356 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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357 "content_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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358 "id": 9, |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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359 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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360 "input": { |
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361 "id": 7, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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362 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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363 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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364 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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365 "inputs": [], |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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366 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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367 "name": "Cut", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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368 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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369 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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370 "name": "out_file1", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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371 "type": "tabular" |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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372 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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373 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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374 "position": { |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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375 "left": 551.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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376 "top": 1038 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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377 }, |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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378 "post_job_actions": { |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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379 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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380 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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381 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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382 "output_name": "out_file1" |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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383 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
384 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
385 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
386 "tool_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
387 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"delimiter\": \"\\\"T\\\"\", \"columnList\": \"\\\"c3,c21\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
388 "tool_version": "1.0.2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
389 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
390 "uuid": "a80ae099-7298-432d-9884-9e68248efe4e", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
391 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
392 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
393 "10": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
394 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
395 "content_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
396 "id": 10, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
397 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
398 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
399 "id": 8, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
400 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
401 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
402 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
403 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
404 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
405 "name": "Cut", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
406 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
407 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
408 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
409 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
410 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
411 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
412 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
413 "left": 893.0625, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
414 "top": 326.015625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
415 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
416 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
417 "RenameDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
418 "action_arguments": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
419 "newname": "Potential Novel PEPTIDES" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
420 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
421 "action_type": "RenameDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
422 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
423 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
424 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
425 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
426 "tool_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
427 "tool_state": "{\"columnList\": \"\\\"c3\\\"\", \"input\": \"null\", \"delimiter\": \"\\\"T\\\"\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
428 "tool_version": "1.0.2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
429 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
430 "uuid": "08714c16-4992-429b-a719-eee903206f8e", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
431 "workflow_outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
432 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
433 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
434 "output_name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
435 "uuid": "97dcd310-1fee-43bc-ba96-e763c6146ffc" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
436 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
437 ] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
438 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
439 "11": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
440 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
441 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
442 "id": 11, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
443 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
444 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
445 "id": 10, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
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446 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
447 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
448 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
449 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
450 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
451 "name": "Tabular-to-FASTA", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
452 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
453 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
454 "name": "output", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
455 "type": "fasta" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
456 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
457 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
458 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
459 "left": 902.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
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|
460 "top": 440 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
461 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
462 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
463 "HideDatasetActionoutput": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
464 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
465 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
466 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
467 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
468 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
469 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
470 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
471 "tool_state": "{\"title_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": [\\\"1\\\"]}\", \"__page__\": 0, \"seq_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
472 "tool_version": "1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
473 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
474 "uuid": "2903a6de-b7c6-4b1d-84bb-df4423471748", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
475 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
476 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
477 "12": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
478 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
479 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_compute_length/fasta_compute_length/1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
480 "id": 12, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
481 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
482 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
483 "id": 11, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
484 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
485 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
486 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
487 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
488 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
489 "name": "Compute sequence length", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
490 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
491 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
492 "name": "output", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
493 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
494 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
495 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
496 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
497 "left": 857.125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
498 "top": 564.015625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
499 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
500 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
501 "HideDatasetActionoutput": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
502 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
503 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
504 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
505 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
506 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
507 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
508 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_compute_length/fasta_compute_length/1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
509 "tool_state": "{\"__page__\": 0, \"keep_first\": \"\\\"0\\\"\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"__rerun_remap_job_id__\": null}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
510 "tool_version": "1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
511 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
512 "uuid": "f9da80f6-6a7e-4800-bbef-393632c3b89a", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
513 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
514 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
515 "13": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
516 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
517 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
518 "id": 13, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
519 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
520 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
521 "id": 12, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
522 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
523 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
524 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
525 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
526 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
527 "name": "Tabular-to-FASTA", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
528 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
529 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
530 "name": "output", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
531 "type": "fasta" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
532 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
533 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
534 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
535 "left": 886.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
536 "top": 704 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
537 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
538 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
539 "HideDatasetActionoutput": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
540 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
541 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
542 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
543 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
544 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
545 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
546 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/tabular_to_fasta/tab2fasta/1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
547 "tool_state": "{\"title_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": [\\\"1\\\", \\\"2\\\"]}\", \"__page__\": 0, \"seq_col\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
548 "tool_version": "1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
549 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
550 "uuid": "ef2c69a2-4b1e-4694-b264-b0d69cdd3212", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
551 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
552 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
553 "14": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
554 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
555 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
556 "id": 14, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
557 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
558 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
559 "id": 13, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
560 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
561 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
562 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
563 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
564 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
565 "name": "Filter sequences by length", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
566 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
567 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
568 "name": "output", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
569 "type": "fasta" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
570 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
571 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
572 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
573 "left": 888.0625, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
574 "top": 842.96875 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
575 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
576 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
577 "HideDatasetActionoutput": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
578 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
579 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
580 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
581 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
582 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
583 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
584 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
585 "tool_state": "{\"__page__\": 0, \"min_length\": \"\\\"8\\\"\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"max_length\": \"\\\"30\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
586 "tool_version": "1.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
587 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
588 "uuid": "f1ede0d2-305b-49a3-8d75-4e43963d95cf", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
589 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
590 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
591 "15": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
592 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
593 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
594 "id": 15, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
595 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
596 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
597 "id": 13, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
598 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
599 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
600 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
601 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
602 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
603 "name": "Filter sequences by length", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
604 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
605 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
606 "name": "output", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
607 "type": "fasta" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
608 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
609 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
610 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
611 "left": 1163.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
612 "top": 842.46875 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
613 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
614 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
615 "HideDatasetActionoutput": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
616 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
617 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
618 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
619 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
620 "RenameDatasetActionoutput": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
621 "action_arguments": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
622 "newname": "FASTA file with peptides with length greater than 30 aas" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
623 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
624 "action_type": "RenameDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
625 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
626 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
627 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
628 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
629 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/fasta_filter_by_length/fasta_filter_by_length/1.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
630 "tool_state": "{\"__page__\": 0, \"input\": \"null\", \"__rerun_remap_job_id__\": null, \"max_length\": \"\\\"50\\\"\", \"min_length\": \"\\\"31\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
631 "tool_version": "1.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
632 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
633 "uuid": "fa317af8-ed94-41b9-b6b8-74445dd86ef7", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
634 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
635 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
636 "16": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
637 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
638 "content_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
639 "id": 16, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
640 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
641 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
642 "id": 14, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
643 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
644 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
645 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
646 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
647 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
648 "name": "Regex Find And Replace", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
649 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
650 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
651 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
652 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
653 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
654 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
655 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
656 "left": 924.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
657 "top": 1055 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
658 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
659 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
660 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
661 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
662 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
663 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
664 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
665 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
666 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
667 "tool_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
668 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"checks\": \"[{\\\"__index__\\\": 0, \\\"replacement\\\": \\\"\\\\\\\\1 sequence length=\\\\\\\\2 aa\\\", \\\"pattern\\\": \\\"^(>.*)_([0-9]+)$\\\"}]\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
669 "tool_version": "0.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
670 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
671 "uuid": "696021fc-c7d2-4e47-8c28-252c394b49c4", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
672 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
673 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
674 "17": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
675 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
676 "content_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
677 "id": 17, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
678 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
679 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
680 "id": 15, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
681 "output_name": "output" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
682 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
683 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
684 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
685 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
686 "name": "Regex Find And Replace", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
687 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
688 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
689 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
690 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
691 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
692 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
693 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
694 "left": 1199.71875, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
695 "top": 1049 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
696 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
697 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
698 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
699 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
700 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
701 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
702 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
703 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
704 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
705 "tool_id": "toolshed.g2.bx.psu.edu/repos/jjohnson/regex_find_replace/regex1/0.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
706 "tool_state": "{\"input\": \"null\", \"__rerun_remap_job_id__\": null, \"checks\": \"[{\\\"__index__\\\": 0, \\\"replacement\\\": \\\"\\\\\\\\1 sequence length=\\\\\\\\2 aa\\\", \\\"pattern\\\": \\\"^(>.*)_([0-9]+)$\\\"}]\", \"__page__\": 0}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
707 "tool_version": "0.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
708 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
709 "uuid": "aff244a8-5208-478f-a647-2b13542af873", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
710 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
711 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
712 "18": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
713 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
714 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
715 "id": 18, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
716 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
717 "query": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
718 "id": 16, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
719 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
720 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
721 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
722 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
723 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
724 "name": "NCBI BLAST+ remote blastp", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
725 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
726 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
727 "name": "output_tabular", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
728 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
729 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
730 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
731 "name": "output_xml", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
732 "type": "blastxml" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
733 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
734 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
735 "name": "output_txt", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
736 "type": "txt" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
737 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
738 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
739 "name": "output_html", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
740 "type": "html" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
741 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
742 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
743 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
744 "left": 1290.078125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
745 "top": 200 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
746 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
747 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
748 "HideDatasetActionoutput_html": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
749 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
750 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
751 "output_name": "output_html" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
752 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
753 "HideDatasetActionoutput_tabular": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
754 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
755 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
756 "output_name": "output_tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
757 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
758 "HideDatasetActionoutput_txt": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
759 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
760 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
761 "output_name": "output_txt" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
762 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
763 "HideDatasetActionoutput_xml": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
764 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
765 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
766 "output_name": "output_xml" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
767 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
768 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
769 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
770 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
771 "tool_state": "{\"evalue_cutoff\": \"\\\"200000.0\\\"\", \"__page__\": 0, \"adv_opts\": \"{\\\"scoring\\\": {\\\"gap_costs\\\": \\\"-gapopen 9 -gapextend 1\\\", \\\"matrix\\\": \\\"PAM30\\\", \\\"__current_case__\\\": 7}, \\\"use_sw_tback\\\": \\\"False\\\", \\\"window_size\\\": \\\"15\\\", \\\"adv_opts_selector\\\": \\\"advanced\\\", \\\"comp_based_stats\\\": \\\"0\\\", \\\"parse_deflines\\\": \\\"True\\\", \\\"filter_query\\\": \\\"False\\\", \\\"word_size\\\": \\\"2\\\", \\\"__current_case__\\\": 1, \\\"threshold\\\": \\\"16\\\"}\", \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"db_opts\": \"{\\\"db_opts_selector\\\": \\\"remote\\\", \\\"taxid_repeat\\\": [{\\\"__index__\\\": 0, \\\"taxid\\\": \\\"10090\\\", \\\"exclude\\\": \\\"False\\\"}], \\\"__current_case__\\\": 2, \\\"database\\\": \\\"nr\\\"}\", \"blast_type\": \"\\\"blastp-short\\\"\", \"fmt_opt\": \"{\\\"out_format\\\": \\\"blastxml\\\", \\\"outfmt\\\": \\\"5\\\", \\\"max_target_seqs\\\": \\\"1\\\", \\\"__current_case__\\\": 1}\", \"query\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
772 "tool_version": "1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
773 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
774 "uuid": "0623c7ec-4140-4364-a4bd-f7ea9629b631", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
775 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
776 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
777 "19": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
778 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
779 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
780 "id": 19, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
781 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
782 "query": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
783 "id": 17, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
784 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
785 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
786 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
787 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
788 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
789 "name": "NCBI BLAST+ remote blastp", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
790 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
791 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
792 "name": "output_tabular", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
793 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
794 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
795 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
796 "name": "output_xml", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
797 "type": "blastxml" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
798 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
799 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
800 "name": "output_txt", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
801 "type": "txt" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
802 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
803 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
804 "name": "output_html", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
805 "type": "html" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
806 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
807 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
808 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
809 "left": 1423.21875, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
810 "top": 1050 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
811 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
812 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
813 "HideDatasetActionoutput_html": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
814 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
815 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
816 "output_name": "output_html" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
817 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
818 "HideDatasetActionoutput_tabular": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
819 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
820 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
821 "output_name": "output_tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
822 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
823 "HideDatasetActionoutput_txt": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
824 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
825 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
826 "output_name": "output_txt" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
827 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
828 "HideDatasetActionoutput_xml": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
829 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
830 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
831 "output_name": "output_xml" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
832 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
833 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
834 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
835 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blast_plus_remote_blastp/blast_plus_remote_blastp/1.0.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
836 "tool_state": "{\"evalue_cutoff\": \"\\\"10.0\\\"\", \"__page__\": 0, \"adv_opts\": \"{\\\"scoring\\\": {\\\"gap_costs\\\": \\\"-gapopen 11 -gapextend 1\\\", \\\"matrix\\\": \\\"BLOSUM62\\\", \\\"__current_case__\\\": 2}, \\\"use_sw_tback\\\": \\\"False\\\", \\\"window_size\\\": \\\"40\\\", \\\"adv_opts_selector\\\": \\\"advanced\\\", \\\"comp_based_stats\\\": \\\"2\\\", \\\"parse_deflines\\\": \\\"True\\\", \\\"filter_query\\\": \\\"False\\\", \\\"word_size\\\": \\\"3\\\", \\\"__current_case__\\\": 1, \\\"threshold\\\": \\\"11\\\"}\", \"__rerun_remap_job_id__\": null, \"db_opts\": \"{\\\"db_opts_selector\\\": \\\"remote\\\", \\\"taxid_repeat\\\": [{\\\"__index__\\\": 0, \\\"taxid\\\": \\\"10090\\\", \\\"exclude\\\": \\\"False\\\"}], \\\"__current_case__\\\": 2, \\\"database\\\": \\\"nr\\\"}\", \"blast_type\": \"\\\"blastp\\\"\", \"fmt_opt\": \"{\\\"out_format\\\": \\\"blastxml\\\", \\\"outfmt\\\": \\\"5\\\", \\\"max_target_seqs\\\": \\\"1\\\", \\\"__current_case__\\\": 1}\", \"query\": \"null\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
837 "tool_version": "1.0.1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
838 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
839 "uuid": "bbca1b78-3170-44fe-ae0f-b727377987cc", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
840 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
841 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
842 "20": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
843 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
844 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
845 "id": 20, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
846 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
847 "blastxml_file": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
848 "id": 18, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
849 "output_name": "output_xml" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
850 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
851 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
852 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
853 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
854 "name": "BLAST XML to selected tabular columns", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
855 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
856 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
857 "name": "tabular_file", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
858 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
859 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
860 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
861 "name": "unmatched_file", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
862 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
863 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
864 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
865 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
866 "left": 1265.0625, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
867 "top": 375 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
868 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
869 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
870 "HideDatasetActiontabular_file": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
871 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
872 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
873 "output_name": "tabular_file" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
874 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
875 "HideDatasetActionunmatched_file": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
876 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
877 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
878 "output_name": "unmatched_file" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
879 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
880 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
881 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
882 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
883 "tool_state": "{\"__page__\": 0, \"qdef\": \"\\\"False\\\"\", \"blastxml_file\": \"null\", \"__rerun_remap_job_id__\": null, \"maxhits\": \"\\\"1\\\"\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"allqueries\": \"\\\"False\\\"\", \"output\": \"{\\\"out_format\\\": \\\"cols\\\", \\\"columns\\\": [\\\"qseqid\\\", \\\"sseqid\\\", \\\"pident\\\", \\\"length\\\", \\\"mismatch\\\", \\\"gapopen\\\", \\\"qstart\\\", \\\"qend\\\", \\\"sstart\\\", \\\"send\\\", \\\"evalue\\\", \\\"bitscore\\\", \\\"sallseqid\\\", \\\"score\\\", \\\"nident\\\", \\\"positive\\\", \\\"gaps\\\", \\\"ppos\\\", \\\"qframe\\\", \\\"sframe\\\", \\\"qseq\\\", \\\"sseq\\\", \\\"qlen\\\", \\\"slen\\\"], \\\"__current_case__\\\": 2}\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"maxhsps\": \"\\\"1\\\"\", \"unmatched\": \"\\\"True\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
884 "tool_version": "1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
885 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
886 "uuid": "3a9c02cf-45ec-42ab-84e2-4544e252e832", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
887 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
888 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
889 "21": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
890 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
891 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
892 "id": 21, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
893 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
894 "blastxml_file": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
895 "id": 19, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
896 "output_name": "output_xml" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
897 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
898 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
899 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
900 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
901 "name": "BLAST XML to selected tabular columns", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
902 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
903 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
904 "name": "tabular_file", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
905 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
906 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
907 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
908 "name": "unmatched_file", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
909 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
910 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
911 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
912 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
913 "left": 1677.578125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
914 "top": 1049.265625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
915 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
916 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
917 "HideDatasetActiontabular_file": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
918 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
919 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
920 "output_name": "tabular_file" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
921 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
922 "HideDatasetActionunmatched_file": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
923 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
924 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
925 "output_name": "unmatched_file" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
926 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
927 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
928 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
929 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/blastxml_to_tabular_selectable/blastxml_to_tabular_selectable/1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
930 "tool_state": "{\"__page__\": 0, \"qdef\": \"\\\"False\\\"\", \"blastxml_file\": \"null\", \"__rerun_remap_job_id__\": null, \"maxhits\": \"\\\"1\\\"\", \"unmatched\": \"\\\"True\\\"\", \"allqueries\": \"\\\"False\\\"\", \"output\": \"{\\\"out_format\\\": \\\"cols\\\", \\\"columns\\\": [\\\"qseqid\\\", \\\"sseqid\\\", \\\"pident\\\", \\\"length\\\", \\\"mismatch\\\", \\\"gapopen\\\", \\\"qstart\\\", \\\"qend\\\", \\\"sstart\\\", \\\"send\\\", \\\"evalue\\\", \\\"bitscore\\\", \\\"sallseqid\\\", \\\"score\\\", \\\"nident\\\", \\\"positive\\\", \\\"gaps\\\", \\\"ppos\\\", \\\"qframe\\\", \\\"sframe\\\", \\\"qseq\\\", \\\"sseq\\\", \\\"qlen\\\", \\\"slen\\\"], \\\"__current_case__\\\": 2}\", \"maxhsps\": \"\\\"1\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
931 "tool_version": "1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
932 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
933 "uuid": "c534ca6c-2876-4f62-b9e9-a164f3829bd2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
934 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
935 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
936 "22": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
937 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
938 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
939 "id": 22, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
940 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
941 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
942 "id": 20, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
943 "output_name": "tabular_file" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
944 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
945 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
946 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
947 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
948 "name": "Compute", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
949 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
950 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
951 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
952 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
953 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
954 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
955 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
956 "left": 1350.09375, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
957 "top": 532.015625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
958 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
959 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
960 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
961 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
962 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
963 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
964 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
965 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
966 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
967 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
968 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"cond\": \"\\\"(c4/c23)*100\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\", \"round\": \"\\\"no\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
969 "tool_version": "1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
970 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
971 "uuid": "1b02fcdc-b9dc-4497-8eba-2b79f81b2168", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
972 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
973 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
974 "23": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
975 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
976 "content_id": "Filter1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
977 "id": 23, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
978 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
979 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
980 "id": 22, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
981 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
982 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
983 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
984 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
985 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
986 "name": "Filter", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
987 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
988 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
989 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
990 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
991 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
992 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
993 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
994 "left": 1364.09375, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
995 "top": 635.015625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
996 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
997 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
998 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
999 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1000 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1001 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1002 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1003 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1004 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1005 "tool_id": "Filter1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1006 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"cond\": \"\\\"c3<100 or c17>=1 or c25<100\\\"\", \"input\": \"null\", \"header_lines\": \"\\\"0\\\"\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1007 "tool_version": "1.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1008 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1009 "uuid": "58e54e01-c935-46e9-9b3f-8d91dc157c36", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1010 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1011 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1012 "24": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1013 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1014 "content_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1015 "id": 24, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1016 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1017 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1018 "id": 23, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1019 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1020 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1021 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1022 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1023 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1024 "name": "Cut", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1025 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1026 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1027 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1028 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1029 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1030 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1031 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1032 "left": 1376.09375, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1033 "top": 750.03125 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1034 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1035 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1036 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1037 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1038 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1039 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1040 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1041 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1042 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1043 "tool_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1044 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"delimiter\": \"\\\"T\\\"\", \"columnList\": \"\\\"c1\\\"\", \"input\": \"null\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1045 "tool_version": "1.0.2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1046 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1047 "uuid": "a1fdb8b9-dcb0-4c6c-97dd-d6e2373f1421", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1048 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1049 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1050 "25": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1051 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1052 "content_id": "cat1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1053 "id": 25, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1054 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1055 "input1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1056 "id": 20, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1057 "output_name": "unmatched_file" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1058 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1059 "queries_0|input2": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1060 "id": 24, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1061 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1062 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1063 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1064 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1065 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1066 "name": "Concatenate datasets", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1067 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1068 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1069 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1070 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1071 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1072 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1073 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1074 "left": 1588.0625, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1075 "top": 602 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1076 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1077 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1078 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1079 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1080 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1081 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1082 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1083 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1084 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1085 "tool_id": "cat1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1086 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"input1\": \"null\", \"queries\": \"[{\\\"input2\\\": null, \\\"__index__\\\": 0}]\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1087 "tool_version": "1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1088 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1089 "uuid": "64b3b833-6d3a-4aaa-b666-1206fea216d9", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1090 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1091 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1092 "26": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1093 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1094 "content_id": "cat1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1095 "id": 26, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1096 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1097 "input1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1098 "id": 25, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1099 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1100 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1101 "queries_0|input2": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1102 "id": 21, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1103 "output_name": "unmatched_file" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1104 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1105 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1106 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1107 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1108 "name": "Concatenate datasets", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1109 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1110 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1111 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1112 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1113 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1114 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1115 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1116 "left": 1894.578125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1117 "top": 805.265625 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1118 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1119 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1120 "RenameDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1121 "action_arguments": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1122 "newname": "PEPTIDES corresponding to novel proteoforms" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1123 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1124 "action_type": "RenameDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1125 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1126 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1127 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1128 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1129 "tool_id": "cat1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1130 "tool_state": "{\"__page__\": 0, \"__rerun_remap_job_id__\": null, \"input1\": \"null\", \"queries\": \"[{\\\"input2\\\": null, \\\"__index__\\\": 0}]\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1131 "tool_version": "1.0.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1132 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1133 "uuid": "52f35f03-ba84-4f80-b8fc-2696e7035efe", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1134 "workflow_outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1135 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1136 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1137 "output_name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1138 "uuid": "65f5d2f4-6d95-4085-af01-c0b3e65f454a" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1139 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1140 ] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1141 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1142 "27": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1143 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1144 "content_id": "join1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1145 "id": 27, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1146 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1147 "input1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1148 "id": 26, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1149 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1150 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1151 "input2": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1152 "id": 9, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1153 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1154 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1155 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1156 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1157 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1158 "name": "Join two Datasets", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1159 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1160 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1161 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1162 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1163 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1164 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1165 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1166 "left": 1937.96875, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1167 "top": 205.9375 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1168 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1169 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1170 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1171 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1172 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1173 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1174 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1175 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1176 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1177 "tool_id": "join1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1178 "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"field1\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"partial\": \"\\\"\\\"\", \"field2\": \"{\\\"__class__\\\": \\\"UnvalidatedValue\\\", \\\"value\\\": \\\"1\\\"}\", \"__rerun_remap_job_id__\": null, \"fill_empty_columns\": \"{\\\"fill_empty_columns_switch\\\": \\\"no_fill\\\", \\\"__current_case__\\\": 0}\", \"__workflow_invocation_uuid__\": \"\\\"68b9090ea5e911e58b28fa163e14a73a\\\"\", \"input1\": \"null\", \"unmatched\": \"\\\"\\\"\", \"chromInfo\": \"\\\"/website/galaxyp2014.msi.umn.edu/galaxy-central/tool-data/shared/ucsc/chrom/GRCm38_canon.len\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1179 "tool_version": "2.0.2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1180 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1181 "uuid": "447ad2ac-0485-4f64-a225-ba8720f8e3fd", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1182 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1183 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1184 "28": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1185 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1186 "content_id": "Grouping1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1187 "id": 28, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1188 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1189 "input1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1190 "id": 27, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1191 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1192 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1193 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1194 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1195 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1196 "name": "Group", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1197 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1198 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1199 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1200 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1201 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1202 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1203 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1204 "left": 2038.875, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1205 "top": 359.28125 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1206 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1207 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1208 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1209 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1210 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1211 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1212 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1213 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1214 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1215 "tool_id": "Grouping1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1216 "tool_state": "{\"operations\": \"[{\\\"opcol\\\": \\\"3\\\", \\\"__index__\\\": 0, \\\"optype\\\": \\\"min\\\", \\\"opround\\\": \\\"no\\\"}]\", \"__page__\": 0, \"input1\": \"null\", \"ignorelines\": \"null\", \"groupcol\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"ignorecase\": \"\\\"False\\\"\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1217 "tool_version": "2.1.0", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1218 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1219 "uuid": "e8b67b52-e50e-4d9d-a83c-2f89a4f4f53d", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1220 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1221 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1222 "29": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1223 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1224 "content_id": "join1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1225 "id": 29, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1226 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1227 "input1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1228 "id": 7, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1229 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1230 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1231 "input2": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1232 "id": 28, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1233 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1234 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1235 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1236 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1237 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1238 "name": "Join two Datasets", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1239 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1240 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1241 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1242 "type": "input" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1243 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1244 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1245 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1246 "left": 1855.0625, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1247 "top": 378.96875 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1248 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1249 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1250 "HideDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1251 "action_arguments": {}, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1252 "action_type": "HideDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1253 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1254 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1255 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1256 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1257 "tool_id": "join1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1258 "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"field1\": \"\\\"21\\\"\", \"partial\": \"\\\"\\\"\", \"field2\": \"\\\"2\\\"\", \"__rerun_remap_job_id__\": null, \"fill_empty_columns\": \"{\\\"fill_empty_columns_switch\\\": \\\"no_fill\\\", \\\"__current_case__\\\": 0}\", \"unmatched\": \"\\\"\\\"\", \"input1\": \"null\"}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1259 "tool_version": "2.0.2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1260 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1261 "uuid": "cef8aa6f-66a1-4ceb-adb2-ad2a11d50f33", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1262 "workflow_outputs": [] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1263 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1264 "30": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1265 "annotation": "", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1266 "content_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1267 "id": 30, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1268 "input_connections": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1269 "input": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1270 "id": 29, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1271 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1272 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1273 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1274 "inputs": [], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1275 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1276 "name": "Cut", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1277 "outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1278 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1279 "name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1280 "type": "tabular" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1281 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1282 ], |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
parents:
diff
changeset
|
1283 "position": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1284 "left": 2116.03125, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1285 "top": 520 |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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1286 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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1287 "post_job_actions": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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1288 "RenameDatasetActionout_file1": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1289 "action_arguments": { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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1290 "newname": "PSM REPORT of PEPTIDES corresponding to novel proteoforms" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1291 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1292 "action_type": "RenameDatasetAction", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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1293 "output_name": "out_file1" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1294 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1295 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
galaxyp
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1296 "tool_errors": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1297 "tool_id": "Cut1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1298 "tool_state": "{\"columnList\": \"\\\"c1-c20\\\"\", \"input\": \"null\", \"delimiter\": \"\\\"T\\\"\", \"__rerun_remap_job_id__\": null, \"__page__\": 0}", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1299 "tool_version": "1.0.2", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1300 "type": "tool", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1301 "uuid": "dd3616b1-17fb-403c-86c5-49364a33dfa6", |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1302 "workflow_outputs": [ |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1303 { |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1304 "label": null, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1305 "output_name": "out_file1", |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1306 "uuid": "95e9b117-1291-4787-b3f3-ca968f15178d" |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1307 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1308 ] |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1309 } |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1310 }, |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1311 "uuid": "19b7ca0f-ca39-496a-b727-af2b6b63d7e7" |
05ab719b9b93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/workflows/asms_tutorial_2016 commit 6671681f22de8443c29a6c5824f14175c66daffb-dirty
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1312 } |