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view test-data/blastp_rhodopsin_gibberish.xml @ 0:2bd0cbccb3c6
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| author | galaxyp |
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| date | Wed, 08 Oct 2014 19:38:28 -0400 |
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<?xml version="1.0"?> <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> <BlastOutput> <BlastOutput_program>blastp</BlastOutput_program> <BlastOutput_version>BLASTP 2.2.29+</BlastOutput_version> <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> <BlastOutput_db>/panfs/roc/rissdb/blast/current/nr</BlastOutput_db> <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> <BlastOutput_query-def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</BlastOutput_query-def> <BlastOutput_query-len>348</BlastOutput_query-len> <BlastOutput_param> <Parameters> <Parameters_matrix>BLOSUM62</Parameters_matrix> <Parameters_expect>0.001</Parameters_expect> <Parameters_gap-open>11</Parameters_gap-open> <Parameters_gap-extend>1</Parameters_gap-extend> <Parameters_filter>F</Parameters_filter> </Parameters> </BlastOutput_param> <BlastOutput_iterations> <Iteration> <Iteration_iter-num>1</Iteration_iter-num> <Iteration_query-ID>Query_1</Iteration_query-ID> <Iteration_query-def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</Iteration_query-def> <Iteration_query-len>348</Iteration_query-len> <Iteration_hits> <Hit> <Hit_num>1</Hit_num> <Hit_id>gi|57163783|ref|NP_001009242.1|</Hit_id> <Hit_def>rhodopsin [Felis catus] >gi|75073790|sp|Q95KU1.1|OPSD_FELCA RecName: Full=Rhodopsin [Felis catus] >gi|16516829|emb|CAD10144.1| opsin [Felis catus]</Hit_def> <Hit_accession>NP_001009242</Hit_accession> <Hit_len>348</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>717.613</Hsp_bit-score> <Hsp_score>1851</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>348</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>348</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>348</Hsp_identity> <Hsp_positive>348</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>348</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq> <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> <Hit> <Hit_num>2</Hit_num> <Hit_id>gi|591296700|ref|XP_007075496.1|</Hit_id> <Hit_def>PREDICTED: rhodopsin [Panthera tigris altaica]</Hit_def> <Hit_accession>XP_007075496</Hit_accession> <Hit_len>348</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>714.146</Hsp_bit-score> <Hsp_score>1842</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>348</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>348</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>346</Hsp_identity> <Hsp_positive>347</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>348</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTASKTETSQVAPA</Hsp_hseq> <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT SKTETSQVAPA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>49886901</Statistics_db-num> <Statistics_db-len>17905752166</Statistics_db-len> <Statistics_hsp-len>149</Statistics_hsp-len> <Statistics_eff-space>2084048179483</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> </Statistics> </Iteration_stat> </Iteration> <Iteration> <Iteration_iter-num>2</Iteration_iter-num> <Iteration_query-ID>Query_2</Iteration_query-ID> <Iteration_query-def>gi|3024260|sp|P56514.1|OPSD_BUFBU RecName: Full=Rhodopsin</Iteration_query-def> <Iteration_query-len>354</Iteration_query-len> <Iteration_hits> <Hit> <Hit_num>1</Hit_num> <Hit_id>gi|3024260|sp|P56514.1|OPSD_BUFBU</Hit_id> <Hit_def>RecName: Full=Rhodopsin >gi|2734706|gb|AAB93704.1| rhodopsin [Bufo bufo]</Hit_def> <Hit_accession>P56514</Hit_accession> <Hit_len>354</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>729.169</Hsp_bit-score> <Hsp_score>1881</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>354</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>354</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>354</Hsp_identity> <Hsp_positive>354</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>354</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_hseq> <Hsp_midline>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> <Hit> <Hit_num>2</Hit_num> <Hit_id>gi|3024261|sp|P56515.1|OPSD_BUFMA</Hit_id> <Hit_def>RecName: Full=Rhodopsin >gi|2734708|gb|AAB93705.1| rhodopsin [Rhinella marina]</Hit_def> <Hit_accession>P56515</Hit_accession> <Hit_len>354</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>691.419</Hsp_bit-score> <Hsp_score>1783</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>354</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>354</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>339</Hsp_identity> <Hsp_positive>349</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>354</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSVLCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFVFGQTGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAIMGVAFTWIMALACAAPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFLIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFTHQGSEFGPVFMTIPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGDEDASSAATSKTEASSVSSSQVSPA</Hsp_hseq> <Hsp_midline>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYS+LCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYF+ G TGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHA+MGVAFTWIMAL+CA PPL GWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHF IPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIF++QGSEFGP+FMT+PAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFG++DASSAATSKTEASSVSSSQVSPA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>49886901</Statistics_db-num> <Statistics_db-len>17905752166</Statistics_db-len> <Statistics_hsp-len>149</Statistics_hsp-len> <Statistics_eff-space>2146883802985</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> </Statistics> </Iteration_stat> </Iteration> <Iteration> <Iteration_iter-num>3</Iteration_iter-num> <Iteration_query-ID>Query_3</Iteration_query-ID> <Iteration_query-def>gibberish</Iteration_query-def> <Iteration_query-len>75</Iteration_query-len> <Iteration_hits> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>49886901</Statistics_db-num> <Statistics_db-len>17905752166</Statistics_db-len> <Statistics_hsp-len>46</Statistics_hsp-len> <Statistics_eff-space>452717686880</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> </Statistics> </Iteration_stat> <Iteration_message>lcl|Query_3 gibberish: lcl|Query_3 gibberish: Warning: One or more U or O characters replaced by X for alignment score calculations at positions 46 No hits found</Iteration_message> </Iteration> <Iteration> <Iteration_iter-num>4</Iteration_iter-num> <Iteration_query-ID>Query_4</Iteration_query-ID> <Iteration_query-def>gi|283855846|gb|ADB45242.1| rhodopsin [Cynopterus brachyotis]</Iteration_query-def> <Iteration_query-len>328</Iteration_query-len> <Iteration_hits> <Hit> <Hit_num>1</Hit_num> <Hit_id>gi|283855846|gb|ADB45242.1|</Hit_id> <Hit_def>rhodopsin [Cynopterus brachyotis]</Hit_def> <Hit_accession>ADB45242</Hit_accession> <Hit_len>328</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>677.552</Hsp_bit-score> <Hsp_score>1747</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>328</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>328</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>328</Hsp_identity> <Hsp_positive>328</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>328</Hsp_align-len> <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> <Hsp_midline>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline> </Hsp> </Hit_hsps> </Hit> <Hit> <Hit_num>2</Hit_num> <Hit_id>gi|283855848|gb|ADB45243.1|</Hit_id> <Hit_def>rhodopsin [Dobsonia viridis]</Hit_def> <Hit_accession>ADB45243</Hit_accession> <Hit_len>328</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>674.47</Hsp_bit-score> <Hsp_score>1739</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>328</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>328</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>326</Hsp_identity> <Hsp_positive>328</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>328</Hsp_align-len> <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKTSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGEDEASTTAS</Hsp_hseq> <Hsp_midline>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAK+SSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLG+DEASTTAS</Hsp_midline> </Hsp> </Hit_hsps> </Hit> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>49886901</Statistics_db-num> <Statistics_db-len>17905752166</Statistics_db-len> <Statistics_hsp-len>148</Statistics_hsp-len> <Statistics_eff-space>1894048347240</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> </Statistics> </Iteration_stat> </Iteration> <Iteration> <Iteration_iter-num>5</Iteration_iter-num> <Iteration_query-ID>Query_5</Iteration_query-ID> <Iteration_query-def>gi|283855823|gb|ADB45229.1| rhodopsin [Myotis pilosus]</Iteration_query-def> <Iteration_query-len>328</Iteration_query-len> <Iteration_hits> <Hit> <Hit_num>1</Hit_num> <Hit_id>gi|283855823|gb|ADB45229.1|</Hit_id> <Hit_def>rhodopsin [Myotis ricketti]</Hit_def> <Hit_accession>ADB45229</Hit_accession> <Hit_len>328</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>676.781</Hsp_bit-score> <Hsp_score>1745</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>328</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>328</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>328</Hsp_identity> <Hsp_positive>328</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>328</Hsp_align-len> <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> <Hsp_midline>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline> </Hsp> </Hit_hsps> </Hit> <Hit> <Hit_num>2</Hit_num> <Hit_id>gi|584076339|ref|XP_006758363.1|</Hit_id> <Hit_def>PREDICTED: rhodopsin [Myotis davidii] >gi|432110912|gb|ELK34386.1| Rhodopsin [Myotis davidii]</Hit_def> <Hit_accession>XP_006758363</Hit_accession> <Hit_len>348</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>676.396</Hsp_bit-score> <Hsp_score>1744</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>328</Hsp_query-to> <Hsp_hit-from>11</Hsp_hit-from> <Hsp_hit-to>338</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>328</Hsp_identity> <Hsp_positive>328</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>328</Hsp_align-len> <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> <Hsp_midline>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline> </Hsp> </Hit_hsps> </Hit> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>49886901</Statistics_db-num> <Statistics_db-len>17905752166</Statistics_db-len> <Statistics_hsp-len>148</Statistics_hsp-len> <Statistics_eff-space>1894048347240</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> </Statistics> </Iteration_stat> </Iteration> <Iteration> <Iteration_iter-num>6</Iteration_iter-num> <Iteration_query-ID>Query_6</Iteration_query-ID> <Iteration_query-def>gi|223523|prf||0811197A rhodopsin [Bos taurus]</Iteration_query-def> <Iteration_query-len>347</Iteration_query-len> <Iteration_hits> <Hit> <Hit_num>1</Hit_num> <Hit_id>gi|223523|prf||0811197A</Hit_id> <Hit_def>rhodopsin</Hit_def> <Hit_accession>0811197A</Hit_accession> <Hit_len>347</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>717.227</Hsp_bit-score> <Hsp_score>1850</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>347</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>347</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>347</Hsp_identity> <Hsp_positive>347</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>347</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq> <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> <Hit> <Hit_num>2</Hit_num> <Hit_id>gi|62460472|ref|NP_001014890.1|</Hit_id> <Hit_def>rhodopsin [Bos taurus] >gi|129204|sp|P02699.1|OPSD_BOVIN RecName: Full=Rhodopsin [Bos taurus] >gi|16975387|pdb|1JFP|A Chain A, Structure Of Bovine Rhodopsin (Dark Adapted) >gi|22219255|pdb|1LN6|A Chain A, Structure Of Bovine Rhodopsin (Metarhodopsin Ii) >gi|192988480|pdb|3CAP|A Chain A, Crystal Structure Of Native Opsin: The G Protein-Coupled Receptor Rhodopsin In Its Ligand-Free State >gi|192988481|pdb|3CAP|B Chain B, Crystal Structure Of Native Opsin: The G Protein-Coupled Receptor Rhodopsin In Its Ligand-Free State >gi|195927457|pdb|3C9L|A Chain A, Structure Of Ground-State Bovine Rhodospin In A Hexagonal Crystal Form >gi|197107530|pdb|1F88|A Chain A, Crystal Structure Of Bovine Rhodopsin >gi|197107531|pdb|1F88|B Chain B, Crystal Structure Of Bovine Rhodopsin >gi|206582030|pdb|3DQB|A Chain A, Crystal Structure Of The Active G-protein-coupled Receptor Opsin In Complex With A C-terminal Peptide Derived From The Galpha Subunit Of Transducin >gi|325533987|pdb|3PQR|A Chain A, Crystal Structure Of Metarhodopsin Ii In Complex With A C-Terminal Peptide Derived From The Galpha Subunit Of Transducin >gi|325534012|pdb|3PXO|A Chain A, Crystal Structure Of Metarhodopsin Ii >gi|554793513|pdb|4J4Q|A Chain A, Crystal Structure Of Active Conformation Of Gpcr Opsin Stabilized By Octylglucoside >gi|685425707|pdb|4PXF|A Chain A, Crystal Structure Of The Active G-protein-coupled Receptor Opsin In Complex With The Finger-loop Peptide Derived From The Full-length Arrestin-1 >gi|163443|gb|AAA30674.1| rhodopsin [Bos taurus] >gi|18148871|dbj|BAB83621.1| rhodopsin [synthetic construct] >gi|296474712|tpg|DAA16827.1| TPA: rhodopsin [Bos taurus] >gi|223563|prf||0901188A rhodopsin >gi|223567|prf||0901212A rhodopsin >gi|223818|prf||1001148A rhodopsin</Hit_def> <Hit_accession>NP_001014890</Hit_accession> <Hit_len>348</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>712.22</Hsp_bit-score> <Hsp_score>1837</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>347</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>348</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>347</Hsp_identity> <Hsp_positive>347</Hsp_positive> <Hsp_gaps>1</Hsp_gaps> <Hsp_align-len>348</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq> <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>49886901</Statistics_db-num> <Statistics_db-len>17905752166</Statistics_db-len> <Statistics_hsp-len>149</Statistics_hsp-len> <Statistics_eff-space>2073575575566</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> </Statistics> </Iteration_stat> </Iteration> <Iteration> <Iteration_iter-num>7</Iteration_iter-num> <Iteration_query-ID>Query_7</Iteration_query-ID> <Iteration_query-def>gi|12583665|dbj|BAB21486.1| fresh water form rod opsin [Conger myriaster]</Iteration_query-def> <Iteration_query-len>354</Iteration_query-len> <Iteration_hits> <Hit> <Hit_num>1</Hit_num> <Hit_id>gi|12583665|dbj|BAB21486.1|</Hit_id> <Hit_def>fresh water form rod opsin [Conger myriaster]</Hit_def> <Hit_accession>BAB21486</Hit_accession> <Hit_len>354</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>731.095</Hsp_bit-score> <Hsp_score>1886</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>354</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>354</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>354</Hsp_identity> <Hsp_positive>354</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>354</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_hseq> <Hsp_midline>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> <Hit> <Hit_num>2</Hit_num> <Hit_id>gi|5931796|emb|CAB56646.1|</Hit_id> <Hit_def>rod opsin [Anguilla japonica]</Hit_def> <Hit_accession>CAB56646</Hit_accession> <Hit_len>352</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>663.685</Hsp_bit-score> <Hsp_score>1711</Hsp_score> <Hsp_evalue>0</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>343</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>343</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>315</Hsp_identity> <Hsp_positive>331</Hsp_positive> <Hsp_gaps>0</Hsp_gaps> <Hsp_align-len>343</Hsp_align-len> <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEA</Hsp_qseq> <Hsp_hseq>MNGTEGPNFYVPMSNATGVVRSPFEYPQYYLAEPWAYSALAAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWVVVCKPMSNFRFGENHAIMGVAFTWLMALACAAPPLFGWSRYIPEGMQCSCGIDYYTPNPETYNESFVIYMFVCHFTIPLTVVSFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSSFGPIFMTIPAFFAKSSALYNPLIYICMNKQFRNCMITTLCCGKNPFEEEEGASTTASKTEA</Hsp_hseq> <Hsp_midline>MNGTEGPNFY+PMSNATGVVRSPFEYPQYYLAEPWA+SAL+AYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERW+VVCKP++NFRFGE+HAIMGV TW MALACA PPLFGWSRYIPEG+QCSCGIDYYT P NESFVIYMF CHF+IPL V+SFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGS+FGPIFMTIP+FFAKSSALYNP+IYICMNKQFR+CMITTLCCGKNPFEEE+GAS T+SKTEA</Hsp_midline> </Hsp> </Hit_hsps> </Hit> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>49886901</Statistics_db-num> <Statistics_db-len>17905752166</Statistics_db-len> <Statistics_hsp-len>149</Statistics_hsp-len> <Statistics_eff-space>2146883802985</Statistics_eff-space> <Statistics_kappa>0.041</Statistics_kappa> <Statistics_lambda>0.267</Statistics_lambda> <Statistics_entropy>0.14</Statistics_entropy> </Statistics> </Iteration_stat> </Iteration> </BlastOutput_iterations> </BlastOutput>