Mercurial > repos > galaxyp > cardinal_quality_report
annotate test-data/out4.imzml @ 8:bb9500286fe4 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
| author | galaxyp |
|---|---|
| date | Thu, 23 Apr 2020 08:11:44 -0400 |
| parents | 74b61bf5bc4b |
| children | f365bad862c9 |
| rev | line source |
|---|---|
|
2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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changeset
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1 <?xml version="1.0"?> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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2 <mzML version="1.1" xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0_idx.xsd"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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3 <cvList count="3"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="1.3.1" URI="http://psidev.info/ms/mzML/psi-ms.obo" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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5 <cv id="UO" fullName="Unit Ontology" version="1.15" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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6 <cv id="IMS" fullName="Imaging MS Ontology" version="0.9.1" URI="http://www.maldi-msi.org/download/imzml/imagingMS.obo" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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7 </cvList> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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8 <fileDescription> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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9 <fileContent> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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10 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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11 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
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7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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12 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="b0dec95e-b66f-4c3f-86df-166d942f42c3" /> |
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74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
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13 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="d9b557cf2c0e15a0cdd863e50897b07a55a26f31" /> |
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2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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14 <cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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15 </fileContent> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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16 </fileDescription> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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17 <referenceableParamGroupList count="4"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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18 <referenceableParamGroup id="spectrum1"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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19 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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20 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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21 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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22 </referenceableParamGroup> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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23 <referenceableParamGroup id="scan1"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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24 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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25 </referenceableParamGroup> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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26 <referenceableParamGroup id="mzArray"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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27 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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28 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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29 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
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7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
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30 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
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2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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31 </referenceableParamGroup> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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32 <referenceableParamGroup id="intensityArray"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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33 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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34 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of counts" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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35 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
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7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
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36 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
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2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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37 </referenceableParamGroup> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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38 </referenceableParamGroupList> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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39 <sampleList count="1"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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40 <sample id="sample1" name="Sample1"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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41 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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42 </sample> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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43 </sampleList> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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44 <softwareList count="1"> |
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7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
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45 <software id="Cardinal" version="2.4.0"> |
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2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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46 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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47 </software> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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48 </softwareList> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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49 <scanSettingsList count="1"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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50 <scanSettings id="scansettings1"> |
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7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
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51 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="2" /> |
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2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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52 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="3" /> |
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7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
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53 <cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="3" /> |
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74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
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54 <cvParam cvRef="IMS" accession="IMS:1000045" name="max dimension y" value="3" /> |
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74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
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55 <cvParam cvRef="IMS" accession="IMS:1000046" name="pixel size x" value="2.000000" /> |
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74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
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56 <cvParam cvRef="IMS" accession="IMS:1000047" name="pixel size y" value="1.000000" /> |
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2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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57 </scanSettings> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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58 </scanSettingsList> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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59 <instrumentConfigurationList count="1"> |
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7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
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60 <instrumentConfiguration id="IC1"> |
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74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
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61 <cvParam cvRef="MS" accession="MS:1000031" name="instrument model" /> |
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74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
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62 </instrumentConfiguration> |
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2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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63 </instrumentConfigurationList> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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64 <dataProcessingList count="1"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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changeset
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65 <dataProcessing id="CardinalWriteImzML"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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66 <processingMethod order="1" softwareRef="Cardinal"> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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67 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" /> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
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68 </processingMethod> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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69 </dataProcessing> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
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70 </dataProcessingList> |
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d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
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71 <run defaultInstrumentConfigurationRef="IC1" id="Experiment01" sampleRef="sample1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
72 <spectrumList count="5" defaultDataProcessingRef="CardinalWriteImzML"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
73 <spectrum id="Spectrum=1" defaultArrayLength="0" index="1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
74 <referenceableParamGroupRef ref="spectrum1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
75 <scanList count="1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
76 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
77 <scan instrumentConfigurationRef="IC1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
78 <referenceableParamGroupRef ref="scan1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
79 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
80 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" /> |
|
7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
81 <userParam name="3DPositionX" value="1.000000" /> |
|
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
82 <userParam name="3DPositionY" value="1.000000" /> |
|
2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
83 </scan> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
84 </scanList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
85 <binaryDataArrayList count="2"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
86 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
87 <referenceableParamGroupRef ref="mzArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
88 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
89 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
90 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
91 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
92 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
93 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
94 <referenceableParamGroupRef ref="intensityArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
95 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="4812" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
96 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
97 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
98 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
99 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
100 </binaryDataArrayList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
101 </spectrum> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
102 <spectrum id="Spectrum=2" defaultArrayLength="0" index="2"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
103 <referenceableParamGroupRef ref="spectrum1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
104 <scanList count="1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
105 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
106 <scan instrumentConfigurationRef="IC1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
107 <referenceableParamGroupRef ref="scan1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
108 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
109 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" /> |
|
7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
110 <userParam name="3DPositionX" value="3.000000" /> |
|
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
111 <userParam name="3DPositionY" value="1.000000" /> |
|
2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
112 </scan> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
113 </scanList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
114 <binaryDataArrayList count="2"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
115 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
116 <referenceableParamGroupRef ref="mzArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
117 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
118 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
119 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
120 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
121 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
122 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
123 <referenceableParamGroupRef ref="intensityArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
124 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="9608" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
125 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
126 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
127 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
128 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
129 </binaryDataArrayList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
130 </spectrum> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
131 <spectrum id="Spectrum=3" defaultArrayLength="0" index="3"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
132 <referenceableParamGroupRef ref="spectrum1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
133 <scanList count="1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
134 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
135 <scan instrumentConfigurationRef="IC1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
136 <referenceableParamGroupRef ref="scan1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
137 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
138 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" /> |
|
7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
139 <userParam name="3DPositionX" value="1.000000" /> |
|
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
140 <userParam name="3DPositionY" value="2.000000" /> |
|
2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
141 </scan> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
142 </scanList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
143 <binaryDataArrayList count="2"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
144 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
145 <referenceableParamGroupRef ref="mzArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
146 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
147 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
148 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
149 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
150 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
151 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
152 <referenceableParamGroupRef ref="intensityArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
153 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="14404" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
154 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
155 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
156 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
157 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
158 </binaryDataArrayList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
159 </spectrum> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
160 <spectrum id="Spectrum=4" defaultArrayLength="0" index="4"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
161 <referenceableParamGroupRef ref="spectrum1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
162 <scanList count="1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
163 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
164 <scan instrumentConfigurationRef="IC1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
165 <referenceableParamGroupRef ref="scan1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
166 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
167 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" /> |
|
7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
168 <userParam name="3DPositionX" value="3.000000" /> |
|
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
169 <userParam name="3DPositionY" value="2.000000" /> |
|
2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
170 </scan> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
171 </scanList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
172 <binaryDataArrayList count="2"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
173 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
174 <referenceableParamGroupRef ref="mzArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
175 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
176 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
177 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
178 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
179 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
180 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
181 <referenceableParamGroupRef ref="intensityArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
182 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="19200" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
183 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
184 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
185 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
186 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
187 </binaryDataArrayList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
188 </spectrum> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
189 <spectrum id="Spectrum=5" defaultArrayLength="0" index="5"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
190 <referenceableParamGroupRef ref="spectrum1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
191 <scanList count="1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
192 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
193 <scan instrumentConfigurationRef="IC1"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
194 <referenceableParamGroupRef ref="scan1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
195 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
196 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" /> |
|
7
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
197 <userParam name="3DPositionX" value="1.000000" /> |
|
74b61bf5bc4b
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
2
diff
changeset
|
198 <userParam name="3DPositionY" value="3.000000" /> |
|
2
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
199 </scan> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
200 </scanList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
201 <binaryDataArrayList count="2"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
202 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
203 <referenceableParamGroupRef ref="mzArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
204 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
205 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
206 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
207 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
208 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
209 <binaryDataArray encodedLength="0"> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
210 <referenceableParamGroupRef ref="intensityArray" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
211 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="23996" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
212 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
213 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
214 <binary /> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
215 </binaryDataArray> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
216 </binaryDataArrayList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
217 </spectrum> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
218 </spectrumList> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
219 </run> |
|
d4803c1e5e19
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1
galaxyp
parents:
diff
changeset
|
220 </mzML> |