Mercurial > repos > galaxyp > custom_pro_db_annotation_data_manager

comparison ensembl_datasets.loc.sample @ 1:9b4ee836e35b draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/custom_pro_db commit 2174137cf8a15deefed5910ffa152c4ce9c81af6
author galaxyp
date Thu, 08 Jun 2017 10:55:08 -0400
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0:45755942ae7b 1:9b4ee836e35b
1 aaegypti_gene_ensembl may2009.archive.ensembl.org A.aegypti genes (Ensembl 54 aaegypti) (AaegL1)
2 amelanoleuca_gene_ensembl may2017.archive.ensembl.org Panda genes (Ensembl 89 amelanoleuca) (ailMel1)
3 aplatyrhynchos_gene_ensembl may2017.archive.ensembl.org Duck genes (Ensembl 89 aplatyrhynchos) (BGI_duck_1.0)
4 acarolinensis_gene_ensembl may2017.archive.ensembl.org Anole lizard genes (Ensembl 89 acarolinensis) (AnoCar2.0)
5 acarolinensis_gene_ensembl may2009.archive.ensembl.org Anole lizard genes (Ensembl 54 acarolinensis) (AnoCar1.0)
6 agambiae_gene_ensembl may2009.archive.ensembl.org Mosquito genes (Ensembl 54 agambiae) (AgamP3)
7 amexicanus_gene_ensembl may2017.archive.ensembl.org Cave fish genes (Ensembl 89 amexicanus) (AstMex102)
8 btaurus_gene_ensembl may2017.archive.ensembl.org Cow genes (Ensembl 89 btaurus) (UMD3.1)
9 btaurus_gene_ensembl may2009.archive.ensembl.org Cow genes (Ensembl 54 btaurus) (Btau_4.0)
10 celegans_gene_ensembl may2017.archive.ensembl.org C.elegans genes (Ensembl 89 celegans) (WBcel235)
11 celegans_gene_ensembl may2012.archive.ensembl.org C.elegans genes (Ensembl 67 celegans) (WBcel215)
12 celegans_gene_ensembl may2009.archive.ensembl.org C.elegans genes (Ensembl 54 celegans) (WS190)
13 cjacchus_gene_ensembl may2017.archive.ensembl.org Marmoset genes (Ensembl 89 cjacchus) (C_jacchus3.2.1)
14 cfamiliaris_gene_ensembl may2017.archive.ensembl.org Dog genes (Ensembl 89 cfamiliaris) (CanFam3.1)
15 cfamiliaris_gene_ensembl may2012.archive.ensembl.org Dog genes (Ensembl 67 cfamiliaris) (CanFam 2.0)
16 tsyrichta_gene_ensembl may2017.archive.ensembl.org Tarsier genes (Ensembl 89 tsyrichta) (tarSyr1)
17 cporcellus_gene_ensembl may2017.archive.ensembl.org Guinea Pig genes (Ensembl 89 cporcellus) (cavPor3)
18 csabaeus_gene_ensembl may2017.archive.ensembl.org Vervet-AGM genes (Ensembl 89 csabaeus) (ChlSab1.1)
19 choffmanni_gene_ensembl may2017.archive.ensembl.org Sloth genes (Ensembl 89 choffmanni) (choHof1)
20 cintestinalis_gene_ensembl may2017.archive.ensembl.org C.intestinalis genes (Ensembl 89 cintestinalis) (KH)
21 cintestinalis_gene_ensembl may2009.archive.ensembl.org C.intestinalis genes (Ensembl 54 cintestinalis) (JGI 2)
22 csavignyi_gene_ensembl may2017.archive.ensembl.org C.savignyi genes (Ensembl 89 csavignyi) (CSAV 2.0)
23 drerio_gene_ensembl may2017.archive.ensembl.org Zebrafish genes (Ensembl 89 drerio) (GRCz10)
24 drerio_gene_ensembl mar2015.archive.ensembl.org Zebrafish genes (Ensembl 79 drerio) (Zv9)
25 drerio_gene_ensembl may2009.archive.ensembl.org Zebrafish genes (Ensembl 54 drerio) (Zv8)
26 dnovemcinctus_gene_ensembl may2017.archive.ensembl.org Armadillo genes (Ensembl 89 dnovemcinctus) (Dasnov3.0)
27 dnovemcinctus_gene_ensembl may2012.archive.ensembl.org Armadillo genes (Ensembl 67 dnovemcinctus) (dasNov2)
28 dnovemcinctus_gene_ensembl may2009.archive.ensembl.org Armadillo genes (Ensembl 54 dnovemcinctus) (ARMA)
29 dordii_gene_ensembl may2017.archive.ensembl.org Kangaroo rat genes (Ensembl 89 dordii) (dipOrd1)
30 dmelanogaster_gene_ensembl may2017.archive.ensembl.org Fly genes (Ensembl 89 dmelanogaster) (BDGP6)
31 dmelanogaster_gene_ensembl dec2014.archive.ensembl.org Fly genes (Ensembl 78 dmelanogaster) (BDGP 5)
32 dmelanogaster_gene_ensembl may2009.archive.ensembl.org Fly genes (Ensembl 54 dmelanogaster) (BDGP 5.4)
33 etelfairi_gene_ensembl may2017.archive.ensembl.org Tenrec genes (Ensembl 89 etelfairi) (TENREC)
34 ecaballus_gene_ensembl may2017.archive.ensembl.org Horse genes (Ensembl 89 ecaballus) (Equ Cab 2)
35 eeuropaeus_gene_ensembl may2017.archive.ensembl.org Hedgehog genes (Ensembl 89 eeuropaeus) (eriEur1)
36 fcatus_gene_ensembl may2017.archive.ensembl.org Cat genes (Ensembl 89 fcatus) (Felis_catus_6.2)
37 fcatus_gene_ensembl may2012.archive.ensembl.org Cat genes (Ensembl 67 fcatus) (CAT)
38 falbicollis_gene_ensembl may2017.archive.ensembl.org Collared flycatcher genes (Ensembl 89 falbicollis) (FicAlb_1.4)
39 gmorhua_gene_ensembl may2017.archive.ensembl.org Cod genes (Ensembl 89 gmorhua) (gadMor1)
40 ggallus_gene_ensembl may2017.archive.ensembl.org Chicken genes (Ensembl 89 ggallus) (Gallus_gallus-5.0)
41 ggallus_gene_ensembl jul2016.archive.ensembl.org Chicken genes (Ensembl 85 ggallus) (Galgal4)
42 ggallus_gene_ensembl may2012.archive.ensembl.org Chicken genes (Ensembl 67 ggallus) (WASHUC2)
43 gaculeatus_gene_ensembl may2017.archive.ensembl.org Stickleback genes (Ensembl 89 gaculeatus) (BROAD S1)
44 ggorilla_gene_ensembl may2017.archive.ensembl.org Gorilla genes (Ensembl 89 ggorilla) (gorGor3.1)
45 ggorilla_gene_ensembl may2009.archive.ensembl.org Gorilla genes (Ensembl 54 ggorilla) (gorGor1)
46 hsapiens_gene_ensembl may2017.archive.ensembl.org Human genes (Ensembl 89 hsapiens) (GRCh38.p10)
47 hsapiens_gene_ensembl mar2017.archive.ensembl.org Human genes (Ensembl 88 hsapiens) (GRCh38.p7)
48 hsapiens_gene_ensembl mar2016.archive.ensembl.org Human genes (Ensembl 84 hsapiens) (GRCh38.p5)
49 hsapiens_gene_ensembl sep2015.archive.ensembl.org Human genes (Ensembl 82 hsapiens) (GRCh38.p3)
50 hsapiens_gene_ensembl may2015.archive.ensembl.org Human genes (Ensembl 80 hsapiens) (GRCh38.p2)
51 hsapiens_gene_ensembl dec2014.archive.ensembl.org Human genes (Ensembl 78 hsapiens) (GRCh38)
52 hsapiens_gene_ensembl feb2014.archive.ensembl.org Human genes (Ensembl 75 hsapiens) (GRCh37.p13)
53 hsapiens_gene_ensembl may2012.archive.ensembl.org Human genes (Ensembl 67 hsapiens) (GRCh37.p7)
54 hsapiens_gene_ensembl may2009.archive.ensembl.org Human genes (Ensembl 54 hsapiens) (NCBI 36)
55 itridecemlineatus_gene_ensembl may2017.archive.ensembl.org Squirrel genes (Ensembl 89 itridecemlineatus) (spetri2)
56 itridecemlineatus_gene_ensembl may2009.archive.ensembl.org Squirrel genes (Ensembl 54 itridecemlineatus) (speTri1)
57 lchalumnae_gene_ensembl may2017.archive.ensembl.org Coelacanth genes (Ensembl 89 lchalumnae) (LatCha1)
58 loculatus_gene_ensembl may2017.archive.ensembl.org Spotted gar genes (Ensembl 89 loculatus) (LepOcu1)
59 lafricana_gene_ensembl may2017.archive.ensembl.org Elephant genes (Ensembl 89 lafricana) (Loxafr3.0)
60 lafricana_gene_ensembl may2009.archive.ensembl.org Elephant genes (Ensembl 54 lafricana) (BROAD E1)
61 mmulatta_gene_ensembl may2017.archive.ensembl.org Macaque genes (Ensembl 89 mmulatta) (Mmul_8.0.1)
62 mmulatta_gene_ensembl jul2016.archive.ensembl.org Macaque genes (Ensembl 85 mmulatta) (MMUL 1.0)
63 mgallopavo_gene_ensembl may2017.archive.ensembl.org Turkey genes (Ensembl 89 mgallopavo) (Turkey_2.01)
64 mmurinus_gene_ensembl may2017.archive.ensembl.org Mouse lemur genes (Ensembl 89 mmurinus) (Mmur_2.0)
65 mmurinus_gene_ensembl jul2016.archive.ensembl.org Mouse lemur genes (Ensembl 85 mmurinus) (micMur1)
66 mdomestica_gene_ensembl may2017.archive.ensembl.org Opossum genes (Ensembl 89 mdomestica) (monDom5)
67 mmusculus_gene_ensembl may2017.archive.ensembl.org Mouse genes (Ensembl 89 mmusculus) (GRCm38.p5)
68 mmusculus_gene_ensembl oct2016.archive.ensembl.org Mouse genes (Ensembl 86 mmusculus) (GRCm38.p4)
69 mmusculus_gene_ensembl may2015.archive.ensembl.org Mouse genes (Ensembl 80 mmusculus) (GRCm38.p3)
70 mmusculus_gene_ensembl oct2014.archive.ensembl.org Mouse genes (Ensembl 77 mmusculus) (GRCm38.p2)
71 mmusculus_gene_ensembl may2012.archive.ensembl.org Mouse genes (Ensembl 67 mmusculus) (NCBI m37)
72 mfuro_gene_ensembl may2017.archive.ensembl.org Domestic ferret genes (Ensembl 89 mfuro) (MusPutFur1.0)
73 mlucifugus_gene_ensembl may2017.archive.ensembl.org Microbat genes (Ensembl 89 mlucifugus) (Myoluc2.0)
74 mlucifugus_gene_ensembl may2009.archive.ensembl.org Microbat genes (Ensembl 54 mlucifugus) (myoLuc1)
75 nleucogenys_gene_ensembl may2017.archive.ensembl.org Gibbon genes (Ensembl 89 nleucogenys) (Nleu1.0)
76 meugenii_gene_ensembl may2017.archive.ensembl.org Wallaby genes (Ensembl 89 meugenii) (Meug_1.0)
77 oprinceps_gene_ensembl may2017.archive.ensembl.org Pika genes (Ensembl 89 oprinceps) (OchPri2.0-Ens)
78 oprinceps_gene_ensembl mar2017.archive.ensembl.org Pika genes (Ensembl 88 oprinceps) (OchPri2.0)
79 oniloticus_gene_ensembl may2017.archive.ensembl.org Tilapia genes (Ensembl 89 oniloticus) (Orenil1.0)
80 oanatinus_gene_ensembl may2017.archive.ensembl.org Platypus genes (Ensembl 89 oanatinus) (OANA5)
81 ocuniculus_gene_ensembl may2017.archive.ensembl.org Rabbit genes (Ensembl 89 ocuniculus) (OryCun2.0)
82 ocuniculus_gene_ensembl may2009.archive.ensembl.org Rabbit genes (Ensembl 54 ocuniculus) (RABBIT)
83 olatipes_gene_ensembl may2017.archive.ensembl.org Medaka genes (Ensembl 89 olatipes) (HdrR)
84 ogarnettii_gene_ensembl may2017.archive.ensembl.org Bushbaby genes (Ensembl 89 ogarnettii) (OtoGar3)
85 ogarnettii_gene_ensembl may2009.archive.ensembl.org Bushbaby genes (Ensembl 54 ogarnettii) (otoGar1)
86 oaries_gene_ensembl may2017.archive.ensembl.org Sheep genes (Ensembl 89 oaries) (Oar_v3.1)
87 ptroglodytes_gene_ensembl may2017.archive.ensembl.org Chimp genes (Ensembl 89 ptroglodytes) (CHIMP2.1.4)
88 ptroglodytes_gene_ensembl may2009.archive.ensembl.org Chimp genes (Ensembl 54 ptroglodytes) (CHIMP2.1)
89 panubis_gene_ensembl may2017.archive.ensembl.org Olive Baboon genes (Ensembl 89 panubis) (PapAnu2.0)
90 psinensis_gene_ensembl may2017.archive.ensembl.org Chinese softshell turtle genes (Ensembl 89 psinensis) (PelSin_1.0)
91 pmarinus_gene_ensembl may2017.archive.ensembl.org Lamprey genes (Ensembl 89 pmarinus) (Pmarinus_7.0)
92 pformosa_gene_ensembl may2017.archive.ensembl.org Amazon molly genes (Ensembl 89 pformosa) (Poecilia_formosa-5.1.2)
93 pabelii_gene_ensembl may2017.archive.ensembl.org Orangutan genes (Ensembl 89 pabelii) (PPYG2)
94 pcapensis_gene_ensembl may2017.archive.ensembl.org Rock hyrax genes (Ensembl 89 pcapensis) (proCap1)
95 pvampyrus_gene_ensembl may2017.archive.ensembl.org Megabat genes (Ensembl 89 pvampyrus) (pteVam1)
96 rnorvegicus_gene_ensembl may2017.archive.ensembl.org Rat genes (Ensembl 89 rnorvegicus) (Rnor_6.0)
97 rnorvegicus_gene_ensembl mar2015.archive.ensembl.org Rat genes (Ensembl 79 rnorvegicus) (Rnor_5.0)
98 rnorvegicus_gene_ensembl may2012.archive.ensembl.org Rat genes (Ensembl 67 rnorvegicus) (RGSC 3.4)
99 scerevisiae_gene_ensembl may2017.archive.ensembl.org S.cerevisiae genes (Ensembl 89 scerevisiae) (R64-1-1)
100 scerevisiae_gene_ensembl dec2013.archive.ensembl.org S.cerevisiae genes (Ensembl 74 scerevisiae) (EF 4)
101 scerevisiae_gene_ensembl may2009.archive.ensembl.org S.cerevisiae genes (Ensembl 54 scerevisiae) (SGD1.01)
102 sharrisii_gene_ensembl may2017.archive.ensembl.org Tasmanian Devil genes (Ensembl 89 sharrisii) (Devil_ref v7.0)
103 saraneus_gene_ensembl may2017.archive.ensembl.org Shrew genes (Ensembl 89 saraneus) (sorAra1)
104 sscrofa_gene_ensembl may2017.archive.ensembl.org Pig genes (Ensembl 89 sscrofa) (Sscrofa10.2)
105 tguttata_gene_ensembl may2017.archive.ensembl.org Zebra finch genes (Ensembl 89 tguttata) (taeGut3.2.4)
106 trubripes_gene_ensembl may2017.archive.ensembl.org Fugu genes (Ensembl 89 trubripes) (FUGU 4.0)
107 tnigroviridis_gene_ensembl may2017.archive.ensembl.org Tetraodon genes (Ensembl 89 tnigroviridis) (TETRAODON 8.0)
108 tbelangeri_gene_ensembl may2017.archive.ensembl.org Tree Shrew genes (Ensembl 89 tbelangeri) (tupBel1)
109 ttruncatus_gene_ensembl may2017.archive.ensembl.org Dolphin genes (Ensembl 89 ttruncatus) (turTru1)
110 vpacos_gene_ensembl may2017.archive.ensembl.org Alpaca genes (Ensembl 89 vpacos) (vicPac1)
111 xtropicalis_gene_ensembl may2017.archive.ensembl.org Xenopus genes (Ensembl 89 xtropicalis) (JGI 4.2)
112 xtropicalis_gene_ensembl may2009.archive.ensembl.org Xenopus genes (Ensembl 54 xtropicalis) (JGI 4.1)
113 xmaculatus_gene_ensembl may2017.archive.ensembl.org Platyfish genes (Ensembl 89 xmaculatus) (Xipmac4.4.2)