Mercurial > repos > galaxyp > data_manager_eggnog_mapper_abspath

comparison data_manager/eggnog_macros.xml @ 3:b711f5b6bd44 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/data_manager_eggnog_mapper_abspath commit fd234f7532b34a1b6ced0d3ac53a8f42348e23f7"
author galaxyp
date Fri, 19 Feb 2021 18:54:00 +0000
parents 269f0970d762
children fcb8bdd124f4
comparison
equal deleted inserted replaced
2:2aec8d30ff42 3:b711f5b6bd44
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@VERSION@">2.0.1</token> 3 <token name="@VERSION@">2.0.1</token>
4 <token name="@EGGNOG_DB_VERSION@">5.0</token> 4 <token name="@EGGNOG_DB_VERSION@">2.0</token>
5 <!--
6 # Versionning is super confusing:
7 # eggnog-mapper 1.* needed a db v4.5 (based on eggnog v4.5)
8 # eggnog-mapper 2.0 needs a db v2.0 (based on eggnog v5.0)
9 # db v4.5 are not compatible with eggnog-mapper 2.0
10 -->
11 <token name="@IDX_VERSION@">2.0</token>
5 <xml name="citations"> 12 <xml name="citations">
6 <citations> 13 <citations>
7 <citation type="doi">10.1093/nar/gkv1248</citation> 14 <citation type="doi">10.1093/nar/gkv1248</citation>
8 <citation type="doi">10.1093/molbev/msx148</citation> 15 <citation type="doi">10.1093/molbev/msx148</citation>
9 </citations> 16 </citations>
45 <param name="test" value="true"/> 52 <param name="test" value="true"/>
46 <param name="diamond_database" value="true"/> 53 <param name="diamond_database" value="true"/>
47 <yield /> 54 <yield />
48 <output name="out_file"> 55 <output name="out_file">
49 <assert_contents> 56 <assert_contents>
50 <has_text text="eggnog_mapper_db" /> 57 <has_text text="eggnog_mapper_db_versioned" />
51 <has_text text="@EGGNOG_DB_VERSION@" /> 58 <has_text text="@EGGNOG_DB_VERSION@" />
52 </assert_contents> 59 </assert_contents>
53 </output> 60 </output>
54 </test> 61 </test>
55 </xml> 62 </xml>