Mercurial > repos > galaxyp > eggnog_mapper

comparison tool-data/eggnog_mapper_db_versioned.loc.sample @ 8:96cac424c870 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit e45c15081260025e470d23975ef5a734d3f8fc66"
author galaxyp
date Tue, 25 Jan 2022 13:51:50 +0000
parents 4e4c6329f6cd
children
comparison
equal deleted inserted replaced
7:4e4c6329f6cd 8:96cac424c870
1 #This is a sample file distributed with Galaxy that enables tools 1 #This is a sample file distributed with Galaxy that enables tools
2 #to use a directory of eggnog_mapper data files. 2 #to use a directory of eggnog_mapper data files.
3 # 3 #
4 # eggnog-mapper requires the following files to be installed in the data directory: 4 # eggnog-mapper requires the following files to be installed in the data directory:
5 # https://github.com/jhcepas/eggnog-mapper/blob/master/data/og2level.tsv.gz 5 # https://github.com/jhcepas/eggnog-mapper/blob/master/data/og2level.tsv.gz
6 # http://eggnog5.embl.de/download/emapperdb-5.0.0/eggnog.db.gz 6 # http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog.db.gz
7 # A complete diamond database is available from: 7 # A complete diamond database is available from:
8 # http://eggnog5.embl.de/download/emapperdb-5.0.0/eggnog_proteins.dmnd.gz 8 # http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog_proteins.dmnd.gz
9 # 9 #
10 # The python script download_eggnog_data.py, 10 # The python script download_eggnog_data.py,
11 # included with eggnog_mapper, can be used to download the files to the correct directory 11 # included with eggnog_mapper, can be used to download the files to the correct directory
12 # 12 #
13 # The near-equivalence of columns "value" and "db" is needed for the tests to work, 13 # The near-equivalence of columns "value" and "db" is needed for the tests to work,