Mercurial > repos > galaxyp > eggnog_mapper

diff test-data/make_comp_file.sh @ 6:3cb37af59360 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit 2200885b5049b2d952959001c8a9b5ae5c62bee5"
author galaxyp
date Sat, 05 Sep 2020 07:21:28 +0000
parents f4e5279b5d10
children
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line diff
--- a/test-data/make_comp_file.sh	Mon Nov 11 11:50:36 2019 -0500
+++ b/test-data/make_comp_file.sh	Sat Sep 05 07:21:28 2020 +0000
@@ -4,17 +4,6 @@
 
 emapper.py \
     -i $base_path/test-data/nlim_fragment.fasta \
-    --output HMM_nlim \
-    --output_dir $base_path/test-data \
-    --override \
-    --database $base_path/test-data/cached_locally/hmmdb_levels/ENOG411CB2I/ENOG411CB2I \
-    --data_dir $base_path/test-data/cached_locally \
-    --no_refine\
-    --no_annot \
-    --no_file_comments
-
-emapper.py \
-    -i $base_path/test-data/nlim_fragment.fasta \
     --output DIA_nlim \
     --output_dir $base_path/test-data \
     --override \