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comparison encyclopedia_library_to_blib.xml @ 2:99297071f4b5 draft default tip

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/encyclopedia/tools/encyclopedia commit 0bb79ebbaf73fe6e902f6ef20cc9c9741063bf34
author galaxyp
date Tue, 17 May 2022 14:55:10 +0000
parents 6278dd24a860
children
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1:6278dd24a860 2:99297071f4b5
2 <description>Convert EncyclopeDIA Library to BLIB for Skyline</description> 2 <description>Convert EncyclopeDIA Library to BLIB for Skyline</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 EncyclopeDIA -convert -libtoblib 8 EncyclopeDIA -convert -libtoblib
9 -Djava.awt.headless=true -Duser.language=en-US -Duser.region=US 9 -Djava.awt.headless=true -Duser.language=en-US -Duser.region=US
10 -Xmx\$[ \${GALAXY_MEMORY_MB:-20480} / 1024 ]g 10 -Xmx\$[ \${GALAXY_MEMORY_MB:-20480} / 1024 ]g
11 -numberOfThreadsUsed "\${GALAXY_SLOTS:-4}" 11 -numberOfThreadsUsed "\${GALAXY_SLOTS:-4}"
12 -i '$i' 12 -i '$i'