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comparison encyclopedia_searchtolib.xml @ 2:fb192dd6658a draft default tip

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/encyclopedia/tools/encyclopedia commit 0bb79ebbaf73fe6e902f6ef20cc9c9741063bf34
author galaxyp
date Tue, 17 May 2022 14:56:17 +0000
parents 36880dfd9fa7
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1:36880dfd9fa7 2:fb192dd6658a
2 <description>Build a Chromatogram Library from Data-Independent Acquisition (DIA) MS/MS Data</description> 2 <description>Build a Chromatogram Library from Data-Independent Acquisition (DIA) MS/MS Data</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 @SEARCH2LIB_CMDS@ 8 @SEARCH2LIB_CMDS@
9 ]]></command> 9 ]]></command>
10 <inputs> 10 <inputs>
11 <expand macro="scan_inputs"/> 11 <expand macro="scan_inputs"/>
12 <expand macro="lib_input" optional="true" libhelp="Use a Prosit dlib spectral library to make a chromatogram elib using EncyclopeDIA, or else leave blank to make a Chromatogram library from just the fasta using Walnut"/> 12 <expand macro="lib_input" optional="true" libhelp="Use a Prosit dlib spectral library to make a chromatogram elib using EncyclopeDIA, or else leave blank to make a Chromatogram library from just the fasta using Walnut"/>