Mercurial > repos > galaxyp > flashlfq

comparison flashlfq.xml @ 9:878f6725c4f3 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/flashlfq commit becdef66cd300f7fab7bb04e62632230e8709f09"
author galaxyp
date Thu, 09 Jan 2020 02:52:23 -0500
parents 29fe0caf7bca
children 92c059f90d0e
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8:29fe0caf7bca 9:878f6725c4f3
1 <tool id="flashlfq" name="FlashLFQ" version="1.0.2.1"> 1 <tool id="flashlfq" name="FlashLFQ" version="1.0.3.0">
2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description> 2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.0.2">flashlfq</requirement> 4 <requirement type="package" version="1.0.3">flashlfq</requirement>
5 </requirements> 5 </requirements>
6 <command><![CDATA[ 6 <command><![CDATA[
7 #import re 7 #import re
8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv" 8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv"
9 ln -s '${idt}' '${idt_path}' && 9 ln -s '${idt}' '${idt_path}' &&