Mercurial > repos > galaxyp > flashlfq
diff test-data/aggregatePSMs_5ppmAroundZero.psmtsv @ 4:908ab13490dc draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/flashlfq commit 047addefbac7468a92ba4fc04899bd5136c58ea4
| author | galaxyp |
|---|---|
| date | Wed, 30 Jan 2019 05:39:17 -0500 |
| parents | 6d3560a3a548 |
| children |
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--- a/test-data/aggregatePSMs_5ppmAroundZero.psmtsv Fri Jan 26 09:08:09 2018 -0500 +++ b/test-data/aggregatePSMs_5ppmAroundZero.psmtsv Wed Jan 30 05:39:17 2019 -0500 @@ -1,5 +1,5 @@ -File Name Scan Number Scan Retention Time Num Experimental Peaks Total Ion Current Precursor Scan Number Precursor Charge Precursor MZ Precursor Intensity Precursor Mass Score Notch Quantification Intensity Ambiguous Matches Protein Accession Protein Name Peptide Description Start and End Residues In Protein Previous Amino Acid Next Amino Acid Base Sequence Full Sequence Variable Mods Matched Ion Counts Matched Ion Masses Localized Scores Missed Cleavages Peptide Monoisotopic Mass Decoy/Contaminant/Target Improvement Possible Mass Diff (Da) Mass Diff (ppm)Cumulative Target Cumulative Decoy QValue Cumulative Target Notch Cumulative Decoy Notch QValue Notch -sliced-raw 36 94.12193 13.00000 2929925.75000 34 2.00000 676.33484 3555206.50000 1350.65512 1.098 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098] 0 1350.65681 T 0.000 -0.00169 -1.251201 0 0.000000 1 0 0.000000 -sliced-mzml 36 94.12193 13.00000 2929925.75000 34 2.00000 676.33484 3555188.00000 1350.65512 1.098 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098] 0 1350.65681 T 0.000 -0.00169 -1.251202 0 0.000000 2 0 0.000000 -sliced-raw 25 94.05811 12.00000 2664486.50000 23 2.00000 676.33521 2498743.50000 1350.65586 1.094 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094] 0 1350.65681 T 0.000 -0.00096 -0.708933 0 0.000000 3 0 0.000000 -sliced-mzml 25 94.05811 12.00000 2664486.50000 23 2.00000 676.33484 2493913.00000 1350.65512 1.094 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094] 0 1350.65681 T 0.000 -0.00169 -1.251204 0 0.000000 4 0 0.000000 +File Name Scan Number Scan Retention Time Num Experimental Peaks Total Ion Current Precursor Scan Number Precursor Charge Precursor MZ Precursor Intensity Precursor Mass Score Notch Quantification Intensity Ambiguous Matches Protein Accession Protein Name Peptide Description Start and End Residues In Protein Previous Amino Acid Next Amino Acid Base Sequence Full Sequence Variable Mods Matched Ion Counts Matched Ion Masses Localized Scores Missed Cleavages Peptide Monoisotopic Mass Decoy/Contaminant/Target Improvement Possible Mass Diff (Da) Mass Diff (ppm)Cumulative Target Cumulative Decoy QValue Cumulative Target Notch Cumulative Decoy Notch QValue Notch +sliced-raw 36 94.12193 13.00000 2929925.75000 34 2.00000 676.33484 3555206.50000 1350.65512 1.098 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098] 0 1350.65681 T 0.000 -0.00169 -1.251201 0 0.000000 1 0 0.000000 +sliced-mzml 36 94.12193 13.00000 2929925.75000 34 2.00000 676.33484 3555188.00000 1350.65512 1.098 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098,1.098] 0 1350.65681 T 0.000 -0.00169 -1.251202 0 0.000000 2 0 0.000000 +sliced-raw 25 94.05811 12.00000 2664486.50000 23 2.00000 676.33521 2498743.50000 1350.65586 1.094 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094] 0 1350.65681 T 0.000 -0.00096 -0.708933 0 0.000000 3 0 0.000000 +sliced-mzml 25 94.05811 12.00000 2664486.50000 23 2.00000 676.33484 2493913.00000 1350.65512 1.094 0.000 0 0.00000 P34223 UBX1_YEAST UBX domain-containing protein 1 full [242 to 253] K Y EGFQVADGPLYR EGFQVADGPLYR 0 0;1 [[];[604.33330];] [1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094,1.094] 0 1350.65681 T 0.000 -0.00169 -1.251204 0 0.000000 4 0 0.000000