Mercurial > repos > galaxyp > fragpipe
annotate test-data/tmt11/test2.mzML @ 4:e969a182e3cb draft default tip
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit f98d62a3e8aef1dd26fa64eff5c19f5773652d43
| author | galaxyp |
|---|---|
| date | Fri, 13 Dec 2024 15:17:28 +0000 |
| parents | 14785481da2b |
| children |
| rev | line source |
|---|---|
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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1 <indexedmzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.2_idx.xsd"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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changeset
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2 <mzML xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" id="PTRC_Skubitz_Plex2_F14_9Aug19_Rage_Rep-19-06-08.raw.thermo" version="1.1.0"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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3 <cvList count="2"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="4.1.41" URI="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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5 <cv id="UO" fullName="Unit Ontology" version="09:04:2014" URI="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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changeset
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6 </cvList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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7 <fileDescription> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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8 <fileContent> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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9 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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10 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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11 </fileContent> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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changeset
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12 <sourceFileList count="1"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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13 <sourceFile id="RAW1" name="PTRC_Skubitz_Plex2_F14_9Aug19_Rage_Rep-19-06-08.raw.thermo.raw" location="file:///"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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14 <cvParam cvRef="MS" accession="MS:1000768" name="Thermo nativeID format" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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15 <cvParam cvRef="MS" accession="MS:1000563" name="Thermo RAW format" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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16 <cvParam cvRef="MS" accession="MS:1000569" name="SHA-1" value="dda606329b1e67175952e8b11a8f0b5634644871" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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17 </sourceFile> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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18 </sourceFileList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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19 </fileDescription> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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20 <referenceableParamGroupList count="1"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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21 <referenceableParamGroup id="CommonInstrumentParams"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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22 <cvParam cvRef="MS" accession="MS:1002732" name="Orbitrap Fusion Lumos" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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23 <cvParam cvRef="MS" accession="MS:1000529" name="instrument serial number" value="FSN20614" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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24 </referenceableParamGroup> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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25 </referenceableParamGroupList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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26 <softwareList count="2"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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27 <software id="Xcalibur" version="3.0.2041"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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28 <cvParam cvRef="MS" accession="MS:1000532" name="Xcalibur" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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29 </software> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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30 <software id="pwiz" version="3.0.20287"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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31 <cvParam cvRef="MS" accession="MS:1000615" name="ProteoWizard software" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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changeset
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32 </software> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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changeset
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33 </softwareList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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changeset
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34 <instrumentConfigurationList count="2"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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35 <instrumentConfiguration id="IC1"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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36 <referenceableParamGroupRef ref="CommonInstrumentParams" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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37 <componentList count="4"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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38 <source order="1"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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39 <cvParam cvRef="MS" accession="MS:1000398" name="nanoelectrospray" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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40 <cvParam cvRef="MS" accession="MS:1000485" name="nanospray inlet" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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41 </source> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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42 <analyzer order="2"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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43 <cvParam cvRef="MS" accession="MS:1000081" name="quadrupole" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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44 </analyzer> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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45 <analyzer order="3"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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46 <cvParam cvRef="MS" accession="MS:1000484" name="orbitrap" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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47 </analyzer> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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48 <detector order="4"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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49 <cvParam cvRef="MS" accession="MS:1000624" name="inductive detector" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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50 </detector> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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51 </componentList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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52 <softwareRef ref="Xcalibur" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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53 </instrumentConfiguration> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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54 <instrumentConfiguration id="IC2"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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55 <referenceableParamGroupRef ref="CommonInstrumentParams" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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56 <componentList count="4"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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57 <source order="1"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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58 <cvParam cvRef="MS" accession="MS:1000398" name="nanoelectrospray" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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59 <cvParam cvRef="MS" accession="MS:1000485" name="nanospray inlet" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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60 </source> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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61 <analyzer order="2"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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62 <cvParam cvRef="MS" accession="MS:1000081" name="quadrupole" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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63 </analyzer> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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64 <analyzer order="3"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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65 <cvParam cvRef="MS" accession="MS:1000083" name="radial ejection linear ion trap" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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66 </analyzer> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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67 <detector order="4"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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68 <cvParam cvRef="MS" accession="MS:1000253" name="electron multiplier" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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69 </detector> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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70 </componentList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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71 <softwareRef ref="Xcalibur" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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72 </instrumentConfiguration> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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73 </instrumentConfigurationList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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74 <dataProcessingList count="1"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
75 <dataProcessing id="pwiz_Reader_Thermo_conversion"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
76 <processingMethod order="0" softwareRef="pwiz"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
77 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
78 </processingMethod> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
79 <processingMethod order="1" softwareRef="pwiz"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
80 <cvParam cvRef="MS" accession="MS:1000035" name="peak picking" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
81 <userParam name="Thermo/Xcalibur peak picking" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
82 </processingMethod> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
83 </dataProcessing> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
84 </dataProcessingList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
85 <run id="PTRC_Skubitz_Plex2_F14_9Aug19_Rage_Rep-19-06-08.raw.thermo" defaultInstrumentConfigurationRef="IC1" startTimeStamp="2019-08-13T08:16:29Z" defaultSourceFileRef="RAW1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
86 <spectrumList count="10000" defaultDataProcessingRef="pwiz_Reader_Thermo_conversion"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
87 <spectrum index="2126" id="controllerType=0 controllerNumber=1 scan=2127" defaultArrayLength="170"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
88 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
89 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
90 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
91 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
92 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="762.337646484375" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
93 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="3.80934e05" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
94 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="1.657779375e06" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
95 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.071281433105" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
96 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="885.33984375" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
97 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
98 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
99 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
100 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="5.0249845584" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
101 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 511.2222@hcd30.00 [110.0000-1033.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
102 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="105.0" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
103 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="511.22222900390625" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
104 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
105 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
106 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
107 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1033.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
108 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
109 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
110 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
111 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
112 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
113 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=2114"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
114 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
115 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="511.222229003906" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
116 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
117 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
118 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
119 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
120 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
121 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
122 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="511.222229003906" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
123 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
124 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="2.293046734375e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
125 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
126 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
127 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
128 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
129 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
130 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
131 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
132 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
133 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
134 <binaryDataArray encodedLength="924"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
135 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
136 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
137 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
138 <binary>eJwt0F1IU2EYB/BXszIpQoswrXi3CUGaF0lQruhsEqQGORUvNPF1K83UzJlmH25H50e6YqQEEUlnGwgKgUyLKLJjEpGE5gyNPue8ENKo3Lrxog//T+fmx//52s5hjAVcrUUS+/e41p5clUeXw8CmiGLYEQV56mQJcmKUWFUIN7lEKke9pbhz4zNUlzVm1GuSyBm7BXfCz6GcPw7FQc0p9BN1p1eVoo1k2AP5xDxkE5oyOGyA8vpMGNCT6ndtOfZeG8k5M1RfWyDz+yGPd55B/6cH8h+6CvyPYxaovpHO4u5LD2TpY1B+GKT8Nb4Sc31SFeZuZUGmdUC+ax6qrjXV+B1tFBRxGefQd5qhmt8HlSNzlA8n1SB3GM5DH8nrTJDF3INiIbYW/f17oPTnBFQbbJCts0NRoVI2TkKe9oXm9EHKCxFW7BdoybIcKD8thWzxJuQFQcqzyzSXG1eHuTgfZMUqFDF+yr2aC5j7VAqZ5IGBX4NQ/v0MqplTZKef+rH76nFn1ARlg5nMtlL9+n83tEDlvg9KmimoJlgb0E9xQLW+G/JaN5QejJLNgxexf/sbFLOFjZjvbYayvxsqXdpLcCQDis5qygYv5ZnIy7DfBOUDFqgcD0Fpd8YV9MMmKG8eozzqp9w4DQONPVeR07yQvzM14Q5zQHFnqIm+f4jqS5E23E/OttF3z6Mc0QMVnRfyjZOUS6ZttE9y4wcYKN5ihzu2kjt1kDVYoHhLqgWV1B8mWdsy1YdClFPDkL8ilYVYGY5th1JJCjligPKKm9R7oGADNH/I14y7ecYW9Le5HTA9oRX7XAvFSj9kuQNQzfFB/mKc5vJz21D/WAgVc5Bssraj3+4jqx5DdtfYgfezZ0F5yE8+eQ9FcghKLu01zO0t6sKetAhFot6J/GjAKf0FKaVh+w==</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
139 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
140 <binaryDataArray encodedLength="888"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
141 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
142 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
143 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
144 <binary>eJwFwQtMDHAAB+BMKBbNtTbdldQm3Y5eHilF/H7/LtWOUiyXZsSaoxmpzTMjr3W7rO6W1E23kJPrqUtr6cFEIvPqNmY3Lemhonml+b7QQW86rHwKXVIYjhp3o3joEB7tVcNui4FlolGkSTPhVVUkbnEjpiMK4S6Jg+saDdL0F9gu24dXkaUc7skUQ/F6zNT3QJs1Ku42HoY51JH1X6OY7iNYGGvATUkjorYfEHJ7HXaqLbimOYXUsnzobOHc0VTGvikVA9IlfFITIjTWafEx5SJ8PK/Tuf0S7H0FkL0fYXyvTjlbO4OtB2X0r/Bl2YZfyL18ljZJAItM/iwY3RHtEWPG38EWZEd0oFE7hye0Y0ivNGI46zqS3ko5EDQC+I5jUF+NtZE9MPh1odfFiMfv2tBie4TJKQNSQxx4uy+ZXptLUHSuCjUv/PivIg/2m9l8Y0llf7MTD6bkw9H7BjJMgzhuWsVAaRua5wfR+7ZSaCSf4PpCJsbGC0Ss7wHao67ivGcX1fcbRN5QMZyXl6Jk011s22PE5jx3Tr7qxIVwD6YF18L5zFuxtdwALlTQ0qpk58geugd7cODnLfz+3oKEXAn7JpfQYk7mh4qXKPWpQ+2yEK73D+IsxQLGBLoJp9efYZXPZ/MWN+bouxD9bCXl87x4/piMJy85i88rPnFsVCr2a+Sc9iB/WP9AIa8Udwyh9B+o4xdG0EWuFFXdhSKjVCMCTRmcOdSBMNUEE+aYMPzBirkB/dEdYYvYrXOgn8JVnN43xX7eR6sxWOhGFrNp6Td0xmmjg+p6sdHVjNxaM2LLG6CWzmXCErXQda9lYpOKs2Z4i/rkUT50eKCs2dVGn+rnuLIukSpHJ2bm3BPlR2xYravEf+1uJxk=</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
145 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
146 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
147 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
148 <spectrum index="2144" id="controllerType=0 controllerNumber=1 scan=2145" defaultArrayLength="195"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
149 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
150 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
151 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
152 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
153 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="317.201324462891" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
154 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="1.072745546875e05" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
155 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="1.0367455e06" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
156 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.071182250977" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
157 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="718.346801757813" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
158 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
159 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
160 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
161 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="5.062125956283" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
162 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 424.1995@hcd30.00 [110.0000-859.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
163 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="105.0" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
164 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="424.19949340820313" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
165 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
166 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
167 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
168 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="859.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
169 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
170 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
171 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
172 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
173 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
174 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=2136"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
175 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
176 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="424.199493408203" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
177 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
178 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
179 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
180 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
181 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
182 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
183 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="424.199493408203" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
184 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
185 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="1.9822879375e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
186 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
187 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
188 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
189 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
190 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
191 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
192 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
193 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
194 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
195 <binaryDataArray encodedLength="1032"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
196 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
197 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
198 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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200 </binaryDataArray> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
201 <binaryDataArray encodedLength="1024"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
202 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
203 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
204 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
205 <binary>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</binary> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
206 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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207 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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208 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
209 <spectrum index="2354" id="controllerType=0 controllerNumber=1 scan=2355" defaultArrayLength="70"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
210 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
211 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
212 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
213 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
214 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="320.059173583984" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
215 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="28885.140625" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
216 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="2.1301084375e05" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
217 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="112.688179016113" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
218 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="1024.785278320313" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
219 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
220 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
221 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
222 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="5.514855710667" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
223 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 546.7552@hcd30.00 [110.0000-1104.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
224 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="105.0" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
225 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="546.75518798828125" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
226 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
227 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
228 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
229 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1104.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
230 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
231 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
232 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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|
233 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
234 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
235 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=2353"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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236 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
237 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="546.755187988281" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
238 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
239 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
240 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
241 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
242 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
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243 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
244 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="546.755187988281" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
245 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
246 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="6.408466171875e05" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
247 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
248 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
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249 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
250 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
251 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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252 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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253 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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254 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
255 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
256 <binaryDataArray encodedLength="464"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
257 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
258 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
259 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
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|
260 <binary>eJwt0T9IAlEcB/BnbomLEgRhWQlBSRE1OrxVGoNAsHyXXFaDeWalVHIpQXVIFjZFcSFF0VCQayBJTS1BERXUUWNCpDQcQn/u+5o+fH/3fr/f3TtCiNPi9lPyZzAG1fDlsCHRO0YMZfchpJEaJP2lAM7pOixGQwz1RJeAc9vCv6ewWD2D8lEBah+to6hLWhBev4l4bveOGTIPVx1UePbWhTDv1TGOfn95AvuSfZPQlYd05wJqd/VhzNXbIIn1QLZOp7CnwRJBPuiFck2QsG/LFsU9POxBljNNo/9WgMWsBFmFxND30gxVU4rnr2/IfhwzyN3pWdhZgRo1zyH7rJAeO6Hqs8VRNz1DUm5PoH5uncfeoRIkcWUBczJNi/w/5ZLILVcyFG1LmFNo5H5y6cZjCu8V2E/j++7fIbvZXOb3MbCCfFJdxXmPfQ118UlBfTefQZ/LnKW/RZ2Rxw==</binary> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
261 </binaryDataArray> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
262 <binaryDataArray encodedLength="388"> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
263 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
264 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
265 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
266 <binary>eJwBGAHn/ozUNUTF2iREjYJARN4KPkT6JnVEdQlTRFY76kSN7TZElHZtRL7HXUREZYFEG/B/RLgUYERTd0BEe/4FRewSi0Se6IdEjiEeRb3FgEQMG4ZEqCRrRb1jekR//IVEydRxRKpdiET6DMhEp3ujRB/0CUUSaolEe6UPRroehERJzwhF/SqGRDKLnUVk/7xEI56rRLW2mEQ1Y5RESKrhRrIbjESwIZNEheCQREr5rURrVSBFzajFRJo+v0R45qpEGXYWRVGIwETZAIhEmnIbRXlg10QfcalEX0EKRXghE0V32R1FMP6iRBg3pEUs5MtG9MOORFHNb0aiHLFEP/6NROedfkZ44gNGX2SXRHR2y0WOocZFeAI3RZfznETS4Xr3</binary> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
267 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
268 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
269 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
270 <spectrum index="2640" id="controllerType=0 controllerNumber=1 scan=2641" defaultArrayLength="243"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
271 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
272 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
273 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
274 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
275 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="690.352783203125" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
276 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="2.2401540625e05" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
277 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="2.17390275e06" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
278 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.346565246582" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
279 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="949.4521484375" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
280 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
281 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
282 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
283 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="6.26743632855" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
284 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 546.7549@hcd30.00 [110.0000-1104.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
285 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="105.0" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
286 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="546.7548828125" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
287 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
288 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
289 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
290 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1104.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
291 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
292 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
293 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
294 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
295 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
296 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=2638"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
297 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
298 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="546.7548828125" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
299 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
300 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
301 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
302 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
303 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
304 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
305 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="546.7548828125" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
306 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
307 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="4.226076875e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
308 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
309 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
310 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
311 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
312 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
313 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
314 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
315 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
316 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
317 <binaryDataArray encodedLength="1252"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
318 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
319 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
320 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
322 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
323 <binaryDataArray encodedLength="1260"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
324 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
325 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
326 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
327 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
328 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
329 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
330 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
331 <spectrum index="2921" id="controllerType=0 controllerNumber=1 scan=2922" defaultArrayLength="204"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
332 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
333 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
334 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
335 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
336 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="690.352783203125" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
337 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="1.38420015625e05" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
338 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="1.416077e06" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
339 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.071098327637" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
340 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="1052.461303710938" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
341 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
342 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
343 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
344 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="7.01970203255" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
345 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 546.7551@hcd30.00 [110.0000-1104.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
346 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="105.0" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
347 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="546.75506591796875" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
348 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
349 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
350 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
351 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1104.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
352 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
353 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
354 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
355 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
356 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
357 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=2920"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
358 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
359 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="546.755065917969" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
360 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
361 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
362 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
363 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
364 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
365 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
366 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="546.755065917969" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
367 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
368 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="2.985696839844e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
369 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
370 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
371 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
372 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
373 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
374 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
375 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
376 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
377 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
378 <binaryDataArray encodedLength="1100"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
379 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
380 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
381 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
382 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
383 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
384 <binaryDataArray encodedLength="1068"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
385 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
386 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
387 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
388 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
389 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
390 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
391 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
392 <spectrum index="3222" id="controllerType=0 controllerNumber=1 scan=3223" defaultArrayLength="152"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
393 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
394 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
395 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
396 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
397 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="603.320739746094" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
398 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="81526.6640625" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
399 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="7.982994375e05" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
400 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.071060180664" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
401 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="1052.46337890625" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
402 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
403 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
404 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
405 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="7.77446013495" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
406 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 546.7553@hcd30.00 [110.0000-1104.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
407 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="105.0" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
408 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="546.75531005859375" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
409 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
410 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
411 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
412 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1104.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
413 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
414 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
415 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
416 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
417 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
418 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=3220"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
419 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
420 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="546.755310058594" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
421 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
422 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
423 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
424 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
425 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
426 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
427 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="546.755310058594" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
428 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
429 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="1.653450789063e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
430 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
431 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
432 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
433 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
434 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
435 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
436 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
437 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
438 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
439 <binaryDataArray encodedLength="844"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
440 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
441 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
442 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
443 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
444 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
445 <binaryDataArray encodedLength="800"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
446 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
447 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
448 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
449 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
450 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
451 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
452 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
453 <spectrum index="3379" id="controllerType=0 controllerNumber=1 scan=3380" defaultArrayLength="311"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
454 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
455 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
456 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
457 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
458 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="252.108993530273" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
459 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="2.69617825e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
460 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="3.7053e07" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
461 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.071334838867" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
462 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="1041.383544921875" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
463 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
464 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
465 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
466 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="8.128922132017" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
467 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 581.2745@hcd30.00 [110.0000-1173.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
468 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="16.648750305176" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
469 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="581.27435302734375" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
470 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
471 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
472 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
473 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1173.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
474 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
475 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
476 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
477 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
478 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
479 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=3360"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
480 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
481 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="581.274536132813" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
482 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
483 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
484 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
485 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
486 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
487 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
488 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="581.274353027344" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
489 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
490 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="3.24074996875e07" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
491 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
492 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
493 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
494 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
495 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
496 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
497 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
498 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
499 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
500 <binaryDataArray encodedLength="1568"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
501 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
502 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
503 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
504 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
505 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
506 <binaryDataArray encodedLength="1576"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
507 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
508 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
509 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
510 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
511 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
512 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
513 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
514 <spectrum index="3407" id="controllerType=0 controllerNumber=1 scan=3408" defaultArrayLength="295"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
515 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
516 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
517 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
518 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
519 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="498.272247314453" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
520 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="7.61114e05" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
521 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="3.536525e06" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
522 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.071090698242" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
523 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="973.507385253906" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
524 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
525 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
526 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
527 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="8.180163218667" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
528 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 498.2729@hcd30.00 [110.0000-1007.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
529 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="105.0" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
530 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="498.27288818359375" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
531 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
532 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
533 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
534 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1007.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
535 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
536 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
537 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
538 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
539 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
540 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=3390"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
541 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
542 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="498.272888183594" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
543 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
544 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
545 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
546 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
547 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
548 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
549 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="498.272888183594" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
550 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
551 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="3.8321391875e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
552 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
553 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
554 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
555 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
556 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
557 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
558 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
559 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
560 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
561 <binaryDataArray encodedLength="1496"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
562 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
563 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
564 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
565 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
566 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
567 <binaryDataArray encodedLength="1496"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
568 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
569 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
570 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
571 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
572 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
573 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
574 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
575 <spectrum index="3412" id="controllerType=0 controllerNumber=1 scan=3413" defaultArrayLength="214"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
576 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
577 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
578 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
579 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
580 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="586.330505371094" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
581 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="9.981883125e05" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
582 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="5.0928025e06" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
583 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.060073852539" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
584 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="725.357849121094" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
585 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
586 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
587 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
588 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="8.19024011335" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
589 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 393.7083@hcd30.00 [110.0000-798.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
590 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="64.468849182129" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
591 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="393.70834350585938" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
592 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
593 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
594 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
595 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="798.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
596 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
597 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
598 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
599 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
600 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
601 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=3390"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
602 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
603 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="393.708343505859" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
604 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
605 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
606 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
607 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
608 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
609 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
610 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="393.708343505859" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
611 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
612 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="4.735924625e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
613 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
614 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
615 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
616 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
617 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
618 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
619 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
620 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
621 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
622 <binaryDataArray encodedLength="1104"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
623 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
624 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
625 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
626 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
627 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
628 <binaryDataArray encodedLength="1112"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
629 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
630 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
631 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
632 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
633 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
634 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
635 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
636 <spectrum index="3431" id="controllerType=0 controllerNumber=1 scan=3432" defaultArrayLength="130"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
637 <cvParam cvRef="MS" accession="MS:1000580" name="MSn spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
638 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
639 <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
640 <cvParam cvRef="MS" accession="MS:1000127" name="centroid spectrum" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
641 <cvParam cvRef="MS" accession="MS:1000504" name="base peak m/z" value="473.213409423828" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
642 <cvParam cvRef="MS" accession="MS:1000505" name="base peak intensity" value="58222.703125" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
643 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="9.551274375e05" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
644 <cvParam cvRef="MS" accession="MS:1000528" name="lowest observed m/z" value="110.071090698242" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
645 <cvParam cvRef="MS" accession="MS:1000527" name="highest observed m/z" value="1098.345947265625" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
646 <scanList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
647 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
648 <scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
649 <cvParam cvRef="MS" accession="MS:1000016" name="scan start time" value="8.228695983483" unitCvRef="UO" unitAccession="UO:0000031" unitName="minute" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
650 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="FTMS + c NSI d Full ms2 593.7260@hcd30.00 [110.0000-1198.0000]" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
651 <cvParam cvRef="MS" accession="MS:1000927" name="ion injection time" value="49.218441009521" unitCvRef="UO" unitAccession="UO:0000028" unitName="millisecond" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
652 <userParam name="[Thermo Trailer Extra]Monoisotopic M/Z:" value="593.224609375" type="xsd:float" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
653 <scanWindowList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
654 <scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
655 <cvParam cvRef="MS" accession="MS:1000501" name="scan window lower limit" value="110.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
656 <cvParam cvRef="MS" accession="MS:1000500" name="scan window upper limit" value="1198.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
657 </scanWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
658 </scanWindowList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
659 </scan> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
660 </scanList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
661 <precursorList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
662 <precursor spectrumRef="controllerType=0 controllerNumber=1 scan=3414"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
663 <isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
664 <cvParam cvRef="MS" accession="MS:1000827" name="isolation window target m/z" value="593.725952148438" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
665 <cvParam cvRef="MS" accession="MS:1000828" name="isolation window lower offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
666 <cvParam cvRef="MS" accession="MS:1000829" name="isolation window upper offset" value="0.34999999404" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
667 <userParam name="ms level" value="1" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
668 </isolationWindow> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
669 <selectedIonList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
670 <selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
671 <cvParam cvRef="MS" accession="MS:1000744" name="selected ion m/z" value="593.224609375" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
672 <cvParam cvRef="MS" accession="MS:1000041" name="charge state" value="2" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
673 <cvParam cvRef="MS" accession="MS:1000042" name="peak intensity" value="8.919737328125e06" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
674 </selectedIon> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
675 </selectedIonList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
676 <activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
677 <cvParam cvRef="MS" accession="MS:1000422" name="beam-type collision-induced dissociation" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
678 <cvParam cvRef="MS" accession="MS:1000045" name="collision energy" value="30.0" unitCvRef="UO" unitAccession="UO:0000266" unitName="electronvolt" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
679 </activation> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
680 </precursor> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
681 </precursorList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
682 <binaryDataArrayList count="2"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
683 <binaryDataArray encodedLength="748"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
684 <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
685 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
686 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
687 <binary>eJwt0EtIVFEcx/FTRiVE4EozhFtDDxc91CCykGM+0NkURpuZyNOMWY5a6mhZZt3UYrQyB5GoFo69KLJIy0pCOE1JDzJoJBAjujVBi8AwV0FB+D2uPvz+rzN3hBD6fJtXCiHsgRA6KdN7Zo1ErL3Ux9JLZ5U9HnRuhdBO/4EqeYGi31uGurAPlTJav+b8u8mH63L87Lc+QzUTRetLcRnvprj28870NdQvb6D9Lo7q6BTKxcXl5Mw5p0Yx8n3hAealy3jIj877B6iyjh0kv45i5N5QxayiKSvA3eI4Ou7rlfj1eRVz1aOoX62p5vfmzD9MPz+A1u6VNeSGzSiLMmp5f1Euit4PJi+dQd2cEOTutnF0/L/ruRPfd4QcdjUytzyKanVeE/sbdqHTWHLCvP8I9Y6EZvo33SgvlqAT9KC1028MdKMeiRmfTJq9299QVc+gKPeexA4/Rj4FUDW3otMTR92dd4p8N2gcrEf9sAnF0zZU/ePGiZ+m72TY5Be5GCnwoJ1ailI1oI6FUXwcNvM1I7b5nxJPsxdahtaSQZSX5rWwdyURVXYhyse1KLZ2oFPQifZ4n8kTd8x8e26r+Z6kNu58voxyRfYZ6q7tqO/nm5zkRpn5FsWWmOlXlZ+lnnYcrbXuENa0o/bGUJRNotPpaSd3+dC20jr4vuzkc9wpCl6gf3US1RtPJ/UxH+r1FaiqBrqYqxtCWTlssv0HrZZ/pr4xNcxe3SqUvvSw/A8+bBhG</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
688 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
689 <binaryDataArray encodedLength="700"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
690 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
691 <cvParam cvRef="MS" accession="MS:1000574" name="zlib compression" value="" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
692 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts" /> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
693 <binary>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</binary> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
694 </binaryDataArray> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
695 </binaryDataArrayList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
696 </spectrum> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
697 </spectrumList> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
698 </run> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
699 </mzML> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
700 <indexList count="1"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
701 <index name="spectrum"> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
702 <offset idRef="controllerType=0 controllerNumber=1 scan=2127">4969</offset> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
703 <offset idRef="controllerType=0 controllerNumber=1 scan=2145">12006</offset> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
704 <offset idRef="controllerType=0 controllerNumber=1 scan=2355">19296</offset> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
705 <offset idRef="controllerType=0 controllerNumber=1 scan=2641">25382</offset> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
706 <offset idRef="controllerType=0 controllerNumber=1 scan=2922">33117</offset> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
707 <offset idRef="controllerType=0 controllerNumber=1 scan=3223">40521</offset> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
708 <offset idRef="controllerType=0 controllerNumber=1 scan=3380">47398</offset> |
|
14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
galaxyp
parents:
diff
changeset
|
709 <offset idRef="controllerType=0 controllerNumber=1 scan=3408">55783</offset> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
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710 <offset idRef="controllerType=0 controllerNumber=1 scan=3413">64003</offset> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
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711 <offset idRef="controllerType=0 controllerNumber=1 scan=3432">71458</offset> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
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712 </index> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
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713 </indexList> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
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714 <indexListOffset>394827517</indexListOffset> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
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715 <fileChecksum>5930f131cffee70a428e4f7db7248ce056e29e8a</fileChecksum> |
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14785481da2b
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 905cc2be18669cffe9ac6c46fcd08b6857a67f4f
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716 </indexedmzML> |