--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/gffcompare_output_jeipux.bed	Thu Jan 11 11:16:51 2018 -0500
@@ -0,0 +1,29 @@
+1	43776566	43778980	STRG.1163.2_i	0	-	43776566	43778980	100,100,100	3	1094,244,100	0,1948,2314
+1	43776566	43778980	STRG.1163.1_i	0	-	43776566	43778980	100,100,100	3	1155,122,100	0,1887,2314
+1	6453836	6460700	STRG.88.1_u	0	+	6453836	6460700	100,100,100	2	50,156	0,6708
+1	86703842	87050092	STRG.2299.4_j	0	+	86703842	87050092	100,100,100	21	29,148,158,54,102,78,229,101,248,174,80,113,234,80,184,87,148,131,105,102,470	0,40838,41498,50384,56445,108669,117379,150517,153284,174560,226911,255900,286249,317195,340174,340987,343194,343605,343845,344990,345780
+1	86754158	86767638	STRG.2299.6_j	0	+	86754158	86767638	100,100,100	3	122,102,509	0,6129,12971
+1	9942024	9944103	STRG.229.6_j	0	-	9942024	9944103	100,100,100	3	131,395,84	0,298,1995
+1	9942024	9944103	STRG.229.3_j	0	-	9942024	9944103	100,100,100	4	131,62,108,84	0,298,585,1995
+1	86908792	86909683	STRG.2297.1_i	0	-	86908792	86909683	100,100,100	2	319,285	0,606
+1	193145390	193173087	STRG.5202.1_j	0	+	193145390	193173087	100,100,100	8	42,177,205,129,159,393,119,3806	0,11825,16222,17211,20375,22048,23126,23891
+1	193167974	193173087	STRG.5202.3_j	0	+	193167974	193173087	100,100,100	3	157,119,3806	0,542,1307
+2	119749138	119749844	STRG.8811.1_j	0	+	119749138	119749844	100,100,100	3	148,217,172	0,223,534
+2	119972463	120018974	STRG.8821.1_j	0	+	119972463	120018974	100,100,100	19	17,223,92,63,58,171,138,183,161,190,147,176,92,126,71,122,76,112,53	0,482,26018,38279,38538,39469,40129,40448,41155,42159,42879,43229,44316,44676,45117,45292,45835,46024,46458
+2	121008466	121011756	STRG.8871.5_j	0	+	121008466	121011756	100,100,100	4	311,80,1704,74	0,576,1360,3216
+2	121194837	121221232	STRG.8881.3_j	0	-	121194837	121221232	100,100,100	12	3770,146,200,95,2006,192,431,150,272,153,505,75	0,4138,4769,5465,7705,10082,12861,13517,14243,16432,20829,26320
+2	121216142	121247714	STRG.8881.5_j	0	-	121216142	121247714	100,100,100	7	29,93,58,1063,1297,203,214	0,5015,7562,11502,19430,27751,31358
+3	57736119	57820993	STRG.12098.5_j	0	+	57736119	57820993	100,100,100	9	81,144,126,81,126,88,91,106,487	0,11771,28137,32920,43263,60078,66327,70902,84387
+5	110840253	110874013	STRG.22906.3_j	0	+	110840253	110874013	100,100,100	13	1290,125,148,91,109,54,62,100,87,164,116,86,1987	0,8135,8376,9342,15471,18120,20609,23004,25268,26009,26684,27754,31773
+5	110855689	110868215	STRG.22906.4_j	0	+	110855689	110868215	100,100,100	6	144,54,62,100,87,208	0,2684,5173,7568,9832,12318
+5	111417441	111454864	STRG.22929.1_j	0	+	111417441	111454864	100,100,100	3	320,2274,249	0,2168,37174
+5	111546620	111566751	STRG.22958.1_u	0	+	111546620	111566751	100,100,100	4	167,77,2000,786	0,7231,15766,19345
+5	111553369	111564411	STRG.22958.2_u	0	+	111553369	111564411	100,100,100	3	559,1223,249	0,9017,10793
+5	111553369	111567041	STRG.22958.3_u	0	+	111553369	111567041	100,100,100	3	559,2000,2005	0,9017,11667
+5	110786093	110796066	STRG.22901.3_j	0	-	110786093	110796066	100,100,100	20	134,136,158,119,173,191,144,588,269,87,146,126,90,61,148,89,51,83,59,335	0,206,990,1480,1679,2016,2635,2854,4118,4756,4958,5507,6008,6303,6872,7721,8099,8491,8653,9638
+5	110792544	110796066	STRG.22901.5_j	0	-	110792544	110796066	100,100,100	5	569,89,51,221,335	0,1270,1648,2040,3187
+5	112871741	112874253	STRG.22984.5_j	0	-	112871741	112874253	100,100,100	3	755,67,361	0,1753,2151
+5	112875222	112896379	STRG.22984.4_j	0	-	112875222	112896379	100,100,100	3	104,159,124	0,2762,21033
+5	113184127	113192079	STRG.22997.1_u	0	-	113184127	113192079	100,100,100	3	590,88,1476	0,4158,6476
+12	69229664	69231901	STRG.52020.2_u	0	+	69229664	69231901	100,100,100	2	62,203	0,2034
+12	69199878	69228169	STRG.52021.2_j	0	-	69199878	69228169	100,100,100	18	2004,68,177,109,78,60,55,683,73,49,57,84,75,94,78,76,101,73	0,3028,4212,6531,7980,8142,9038,9433,11494,12344,13108,13950,15432,22098,22520,23225,26459,28218