Mercurial > repos > galaxyp > mass_spectrometry_imaging_segmentations

annotate test-data/Example_Continuous.imzML @ 7:adfef12c7e31 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit 8087490eb4dcaf4ead0f03eae4126780d21e5503
author galaxyp
date Fri, 06 Jul 2018 14:14:27 -0400
parents cee9cf693709
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
5
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
1 <?xml version="1.0"?>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
2 <mzML version="1.1" xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0_idx.xsd">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
3 <cvList count="3">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="1.3.1" URI="http://psidev.info/ms/mzML/psi-ms.obo" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
5 <cv id="UO" fullName="Unit Ontology" version="1.15" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
6 <cv id="IMS" fullName="Imaging MS Ontology" version="0.9.1" URI="http://www.maldi-msi.org/download/imzml/imagingMS.obo" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
7 </cvList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
8 <fileDescription>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
9 <fileContent>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
10 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
11 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
12 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="{51BB7C6F-9974-4626-B35F-5B65547BAE6B}" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
13 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="26C26A63DCF7CD1AD768A67AEDB7131C5D88C397" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
14 <cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
15 </fileContent>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
16 </fileDescription>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
17 <referenceableParamGroupList count="4">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
18 <referenceableParamGroup id="spectrum1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
19 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
20 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
21 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
22 </referenceableParamGroup>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
23 <referenceableParamGroup id="scan1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
24 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
25 <cvParam cvRef="MS" accession="MS:1000095" name="linear" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
26 </referenceableParamGroup>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
27 <referenceableParamGroup id="mzArray">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
28 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
29 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
30 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
31 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="32-bit float" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
32 </referenceableParamGroup>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
33 <referenceableParamGroup id="intensityArray">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
34 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
35 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of counts" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
36 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
37 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="32-bit float" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
38 </referenceableParamGroup>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
39 </referenceableParamGroupList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
40 <sampleList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
41 <sample id="sample1" name="Sample1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
42 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
43 </sample>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
44 </sampleList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
45 <softwareList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
46 <software id="Cardinal" version="1.12.0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
47 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
48 </software>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
49 </softwareList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
50 <scanSettingsList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
51 <scanSettings id="scansettings1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
52 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
53 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
54 </scanSettings>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
55 </scanSettingsList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
56 <instrumentConfigurationList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
57 <instrumentConfiguration id="IC1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
58 </instrumentConfigurationList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
59 <dataProcessingList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
60 <dataProcessing id="CardinalWriteImzML">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
61 <processingMethod order="1" softwareRef="Cardinal">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
62 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
63 </processingMethod>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
64 </dataProcessing>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
65 </dataProcessingList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
66 <run defaultInstrumentConfigurationRef="IC1" id="Experiment01" sampleRef="sample1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
67 <spectrumList count="9" defaultDataProcessingRef="CardinalWriteImzML">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
68 <spectrum id="Spectrum=1" defaultArrayLength="0" index="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
69 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
70 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
71 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
72 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
73 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
74 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
75 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
76 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
77 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
78 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
79 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
80 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
81 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
82 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
83 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
84 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
85 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
86 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
87 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
88 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="4812" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
89 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
90 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
91 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
92 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
93 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
94 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
95 <spectrum id="Spectrum=2" defaultArrayLength="0" index="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
96 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
97 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
98 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
99 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
100 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
101 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="2" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
102 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
103 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
104 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
105 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
106 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
107 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
108 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
109 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
110 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
111 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
112 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
113 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
114 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
115 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="9608" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
116 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
117 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
118 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
119 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
120 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
121 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
122 <spectrum id="Spectrum=3" defaultArrayLength="0" index="3">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
123 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
124 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
125 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
126 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
127 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
128 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
129 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
130 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
131 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
132 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
133 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
134 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
135 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
136 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
137 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
138 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
139 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
140 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
141 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
142 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="14404" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
143 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
144 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
145 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
146 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
147 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
148 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
149 <spectrum id="Spectrum=4" defaultArrayLength="0" index="4">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
150 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
151 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
152 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
153 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
154 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
155 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
156 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
157 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
158 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
159 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
160 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
161 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
162 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
163 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
164 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
165 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
166 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
167 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
168 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
169 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="19200" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
170 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
171 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
172 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
173 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
174 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
175 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
176 <spectrum id="Spectrum=5" defaultArrayLength="0" index="5">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
177 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
178 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
179 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
180 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
181 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
182 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="2" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
183 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
184 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
185 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
186 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
187 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
188 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
189 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
190 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
191 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
192 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
193 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
194 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
195 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
196 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="23996" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
197 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
198 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
199 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
200 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
201 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
202 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
203 <spectrum id="Spectrum=6" defaultArrayLength="0" index="6">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
204 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
205 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
206 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
207 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
208 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
209 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
210 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
211 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
212 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
213 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
214 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
215 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
216 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
217 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
218 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
219 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
220 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
221 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
222 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
223 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="28792" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
224 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
225 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
226 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
227 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
228 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
229 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
230 <spectrum id="Spectrum=7" defaultArrayLength="0" index="7">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
231 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
232 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
233 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
234 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
235 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
236 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
237 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
238 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
239 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
240 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
241 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
242 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
243 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
244 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
245 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
246 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
247 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
248 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
249 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
250 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="33588" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
251 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
252 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
253 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
254 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
255 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
256 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
257 <spectrum id="Spectrum=8" defaultArrayLength="0" index="8">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
258 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
259 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
260 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
261 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
262 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
263 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="2" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
264 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
265 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
266 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
267 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
268 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
269 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
270 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
271 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
272 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
273 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
274 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
275 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
276 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
277 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="38384" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
278 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
279 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
280 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
281 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
282 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
283 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
284 <spectrum id="Spectrum=9" defaultArrayLength="0" index="9">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
285 <referenceableParamGroupRef ref="spectrum1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
286 <scanList count="1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
287 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
288 <scan instrumentConfigurationRef="IC1">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
289 <referenceableParamGroupRef ref="scan1" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
290 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
291 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
292 </scan>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
293 </scanList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
294 <binaryDataArrayList count="2">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
295 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
296 <referenceableParamGroupRef ref="mzArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
297 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
298 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
299 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
300 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
301 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
302 <binaryDataArray encodedLength="0">
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
303 <referenceableParamGroupRef ref="intensityArray" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
304 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="43180" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
305 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1199" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
306 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4796" />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
307 <binary />
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
308 </binaryDataArray>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
309 </binaryDataArrayList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
310 </spectrum>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
311 </spectrumList>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
312 </run>
cee9cf693709 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msi_segmentation commit a7be47698f53eb4f00961192327d93e8989276a7
galaxyp
parents: 0
diff changeset
313 </mzML>