Mercurial > repos > galaxyp > maxquant

annotate test-data/09/combined/txt/msmsScans.txt @ 22:9c52362ae7bb draft default tip

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit c810d2eaedfcad1edf1a84cab8296dcd7b35f5bc
author galaxyp
date Mon, 18 Mar 2024 13:07:04 +0000
parents 8934bc76bb52
children
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97a7f34fcb6a "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 641b1d3af3b589a861cde2dc2f8803c9b79df7be"
galaxyp
parents:
diff changeset
1 Raw file Scan number Retention time Ion injection time Total ion current Collision energy Summations Base peak intensity Elapsed time Identified Matched Reverse MS/MS IDs Sequence Length Filtered peaks m/z Mass Charge Type Fragmentation Mass analyzer Parent intensity fraction Fraction of total spectrum Base peak fraction Precursor full scan number Precursor intensity Precursor apex fraction Precursor apex offset Precursor apex offset time Scan event number Modifications Modified sequence Proteins Score PEP Experiment Reporter intensity corrected 1 Reporter intensity corrected 2 Reporter intensity corrected 3 Reporter intensity corrected 4 Reporter intensity corrected 5 Reporter intensity corrected 6 Reporter intensity corrected 7 Reporter intensity corrected 8 Reporter intensity corrected 9 Reporter intensity corrected 10 Reporter intensity corrected 11 Reporter intensity corrected 12 Reporter intensity corrected 13 Reporter intensity corrected 14 Reporter intensity corrected 15 Reporter intensity corrected 16 Reporter intensity corrected 17 Reporter intensity corrected 18 Reporter intensity 1 Reporter intensity 2 Reporter intensity 3 Reporter intensity 4 Reporter intensity 5 Reporter intensity 6 Reporter intensity 7 Reporter intensity 8 Reporter intensity 9 Reporter intensity 10 Reporter intensity 11 Reporter intensity 12 Reporter intensity 13 Reporter intensity 14 Reporter intensity 15 Reporter intensity 16 Reporter intensity 17 Reporter intensity 18 Reporter PIF Reporter fraction Intens Comp Factor CTCD Comp RawOvFtT AGC Fill Scan index MS scan index MS scan number
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8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
2 tmt_data_18 4 0.022647 -1 1555.1 35 0 429.62 -1 -1 0 19 496.5587 NaN 0 PEAK CID ITMS NaN NaN NaN -1 NaN NaN 0 NaN 1 NaN NaN tmt_data_18.mzXML 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN NaN NaN 0 0 2 3
8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
3 tmt_data_18 6 0.028164 -1 306.22 35 0 210 -1 -1 0 3 562.254 NaN 0 PEAK CID ITMS NaN NaN NaN -1 NaN NaN 0 NaN 1 NaN NaN tmt_data_18.mzXML 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN NaN NaN 0 1 3 5
8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
4 tmt_data_18 7 0.030756 -1 76712 0 0 6269.6 -1 -1 0 84 1 NaN 0 PEAK CID FTMS NaN NaN NaN -1 NaN NaN 0 NaN 2 NaN NaN tmt_data_18.mzXML 437.7 465.76 538.68 473.42 0 662.1 803.52 0 1148.3 592.81 894.98 1139.6 977.11 1107.6 934.33 696.59 576.46 1213.5 437.7 465.76 538.68 473.42 0 662.1 803.52 0 1148.3 592.81 894.98 1139.6 977.11 1107.6 934.33 696.59 576.46 1213.5 NaN NaN NaN 0 2 3 5
8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
5 tmt_data_18 10 0.043625 -1 374.34 35 0 119.96 -1 + -1 GANDSMMM 8 7 604.7506 NaN 0 PEAK CID ITMS NaN NaN NaN -1 NaN NaN 0 NaN 1 3 Oxidation (M) _GANDSM(Oxidation (M))M(Oxidation (M))M(Oxidation (M))_ REV__sp|Q8N7M0|DYLT5_HUMAN 0 0.01 tmt_data_18.mzXML 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN NaN NaN 0 3 5 9
8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
6 tmt_data_18 14 0.05893 -1 417.62 35 0 66.299 -1 -1 0 10 553.2144 NaN 0 PEAK CID ITMS NaN NaN NaN -1 NaN NaN 0 NaN 1 NaN NaN tmt_data_18.mzXML 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN NaN NaN 0 4 8 13
8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
7 tmt_data_18 39 0.17826 -1 136.05 35 0 61.009 -1 + -1 QEMEPTR 7 3 404.2059 NaN 0 PEAK CID ITMS NaN NaN NaN -1 NaN NaN 0 NaN 1 Oxidation (M) _QEM(Oxidation (M))EPTR_ REV__sp|O15457|MSH4_HUMAN 4.59465663460819 0.01 tmt_data_18.mzXML 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN NaN NaN 0 5 32 38
8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
8 tmt_data_18 155 0.75055 -1 211.81 35 0 69.087 -1 -1 PGTSGWDSCR 10 6 457.2214 NaN 0 PEAK CID ITMS NaN NaN NaN -1 NaN NaN 0 NaN 1 Unmodified _PGTSGWDSCR_ CON__Q6KB66-1 0 0.01 tmt_data_18.mzXML 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN NaN NaN 0 6 147 154
8934bc76bb52 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 419e4f6608f60f0d73987b890d6b7f8854e874fb
galaxyp
parents: 15
diff changeset
9 tmt_data_18 162 0.781 -1 239.53 35 0 62.874 -1 + -1 MRLQIEQR 8 6 459.9375 NaN 0 PEAK CID ITMS NaN NaN NaN -1 NaN NaN 0 NaN 1 Unmodified _MRLQIEQR_ REV__sp|Q8ND30|LIPB2_HUMAN 4.96526132859811 0.01 tmt_data_18.mzXML 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NaN NaN NaN 0 7 153 161