Mercurial > repos > galaxyp > maxquant

comparison macros.xml @ 12:0839f84def5e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit d0dc9303d449c63a6ffe8fbfe195951d5db9cb89"
author galaxyp
date Sun, 20 Jun 2021 16:37:41 +0000
parents d72c96ad9a16
children 181bd6a5f6ce
comparison
equal deleted inserted replaced
11:d72c96ad9a16 12:0839f84def5e
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <macros> 2 <macros>
3 <token name="@VERSION@">1.6.10.43</token> 3 <token name="@VERSION@">1.6.17.0</token>
4 <token name="@VERSION_PTXQC@">1.0.9</token> 4 <token name="@VERSION_SUFFIX@">0</token>
5 <token name="@VERSION_PTXQC@">1.0.10</token>
5 <token name="@SUBSTITUTION_RX@">[^\w\-\s\.]</token> 6 <token name="@SUBSTITUTION_RX@">[^\w\-\s\.]</token>
6 <token name="@TMT2PLEX@"> 7 <token name="@TMT2PLEX@">
7 - [TMT2plex-Lys126,TMT2plex-Nter126,0,0,0,0,True] 8 - [TMT2plex-Lys126,TMT2plex-Nter126,0,0,0,0,True]
8 - [TMT2plex-Lys127,TMT2plex-Nter127,0,0,0,0,True] 9 - [TMT2plex-Lys127,TMT2plex-Nter127,0,0,0,0,True]
9 </token> 10 </token>
38 - [TMT10plex-Lys131N,TMT10plex-Nter131N,0,0,0,0,True] 39 - [TMT10plex-Lys131N,TMT10plex-Nter131N,0,0,0,0,True]
39 </token> 40 </token>
40 <token name="@TMT11PLEX@"> 41 <token name="@TMT11PLEX@">
41 @TMT10PLEX@ 42 @TMT10PLEX@
42 - [TMT11plex-Lys131C,TMT11plex-Nter131C,0,0,0,0,True] 43 - [TMT11plex-Lys131C,TMT11plex-Nter131C,0,0,0,0,True]
44 </token>
45 <token name="@TMTPRO16PLEX@">
46 - [TMTpro16plex-Lys127N,TMTpro16plex-Nter127N,0,0,0,0,True]
47 - [TMTpro16plex-Lys127C,TMTpro16plex-Nter127C,0,0,0,0,True]
48 - [TMTpro16plex-Lys128N,TMTpro16plex-Nter128N,0,0,0,0,True]
49 - [TMTpro16plex-Lys128C,TMTpro16plex-Nter128C,0,0,0,0,True]
50 - [TMTpro16plex-Lys129N,TMTpro16plex-Nter129N,0,0,0,0,True]
51 - [TMTpro16plex-Lys129C,TMTpro16plex-Nter129C,0,0,0,0,True]
52 - [TMTpro16plex-Lys130N,TMTpro16plex-Nter130N,0,0,0,0,True]
53 - [TMTpro16plex-Lys130C,TMTpro16plex-Nter130C,0,0,0,0,True]
54 - [TMTpro16plex-Lys131N,TMTpro16plex-Nter131N,0,0,0,0,True]
55 - [TMTpro16plex-Lys131C,TMTpro16plex-Nter131C,0,0,0,0,True]
56 - [TMTpro16plex-Lys132N,TMTpro16plex-Nter132N,0,0,0,0,True]
57 - [TMTpro16plex-Lys132C,TMTpro16plex-Nter132C,0,0,0,0,True]
58 - [TMTpro16plex-Lys133N,TMTpro16plex-Nter133N,0,0,0,0,True]
59 - [TMTpro16plex-Lys133C,TMTpro16plex-Nter133C,0,0,0,0,True]
60 - [TMTpro16plex-Lys134N,TMTpro16plex-Nter134N,0,0,0,0,True]
61 - [TMTpro16plex-Lys126C,TMTpro16plex-Nter126C,0,0,0,0,True]
43 </token> 62 </token>
44 <token name="@ITRAQ4PLEX@"> 63 <token name="@ITRAQ4PLEX@">
45 - [iTRAQ4plex-Lys114,iTRAQ4plex-Nter114,0,0,0,0,False] 64 - [iTRAQ4plex-Lys114,iTRAQ4plex-Nter114,0,0,0,0,False]
46 - [iTRAQ4plex-Lys115,iTRAQ4plex-Nter115,0,0,0,0,False] 65 - [iTRAQ4plex-Lys115,iTRAQ4plex-Nter115,0,0,0,0,False]
47 - [iTRAQ4plex-Lys116,iTRAQ4plex-Nter116,0,0,0,0,False] 66 - [iTRAQ4plex-Lys116,iTRAQ4plex-Nter116,0,0,0,0,False]
635 <expand macro="mod_option" value="Tyr-&gt;CamCys"/> 654 <expand macro="mod_option" value="Tyr-&gt;CamCys"/>
636 <expand macro="mod_option" value="Val-&gt;CamCys"/> 655 <expand macro="mod_option" value="Val-&gt;CamCys"/>
637 <expand macro="mod_option" value="Xle-&gt;CamCys"/> 656 <expand macro="mod_option" value="Xle-&gt;CamCys"/>
638 <expand macro="mod_option" value="Cysteinyl"/> 657 <expand macro="mod_option" value="Cysteinyl"/>
639 <expand macro="mod_option" value="Cysteinyl - carbamidomethyl"/> 658 <expand macro="mod_option" value="Cysteinyl - carbamidomethyl"/>
659 <expand macro="mod_option" value="Oxidation (MP)"/>
660 <expand macro="mod_option" value="Propionamide (C)"/>
661 <expand macro="mod_option" value="Propionamide (K)"/>
662 <expand macro="mod_option" value="Propionamide (N-term)"/>
640 </xml> 663 </xml>
641 <xml name="label"> 664 <xml name="label">
642 <expand macro="mod_option" value="Arg6"/> 665 <expand macro="mod_option" value="Arg6"/>
643 <expand macro="mod_option" value="Arg10"/> 666 <expand macro="mod_option" value="Arg10"/>
644 <expand macro="mod_option" value="Lys4"/> 667 <expand macro="mod_option" value="Lys4"/>
772 <expand macro="mod_option" value="iodoTMT6plex-Cys127"/> 795 <expand macro="mod_option" value="iodoTMT6plex-Cys127"/>
773 <expand macro="mod_option" value="iodoTMT6plex-Cys128"/> 796 <expand macro="mod_option" value="iodoTMT6plex-Cys128"/>
774 <expand macro="mod_option" value="iodoTMT6plex-Cys129"/> 797 <expand macro="mod_option" value="iodoTMT6plex-Cys129"/>
775 <expand macro="mod_option" value="iodoTMT6plex-Cys130"/> 798 <expand macro="mod_option" value="iodoTMT6plex-Cys130"/>
776 <expand macro="mod_option" value="iodoTMT6plex-Cys131"/> 799 <expand macro="mod_option" value="iodoTMT6plex-Cys131"/>
800 <expand macro="mod_option" value="TMTpro16plex-Nter126C"/>
801 <expand macro="mod_option" value="TMTpro16plex-Nter127N"/>
802 <expand macro="mod_option" value="TMTpro16plex-Nter127C"/>
803 <expand macro="mod_option" value="TMTpro16plex-Nter128N"/>
804 <expand macro="mod_option" value="TMTpro16plex-Nter128C"/>
805 <expand macro="mod_option" value="TMTpro16plex-Nter129N"/>
806 <expand macro="mod_option" value="TMTpro16plex-Nter129C"/>
807 <expand macro="mod_option" value="TMTpro16plex-Nter130N"/>
808 <expand macro="mod_option" value="TMTpro16plex-Nter130C"/>
809 <expand macro="mod_option" value="TMTpro16plex-Nter131N"/>
810 <expand macro="mod_option" value="TMTpro16plex-Nter131C"/>
811 <expand macro="mod_option" value="TMTpro16plex-Nter132N"/>
812 <expand macro="mod_option" value="TMTpro16plex-Nter132C"/>
813 <expand macro="mod_option" value="TMTpro16plex-Nter133N"/>
814 <expand macro="mod_option" value="TMTpro16plex-Nter133C"/>
815 <expand macro="mod_option" value="TMTpro16plex-Nter134N"/>
816 <expand macro="mod_option" value="TMTpro16plex-Lys126C"/>
817 <expand macro="mod_option" value="TMTpro16plex-Lys127N"/>
818 <expand macro="mod_option" value="TMTpro16plex-Lys127C"/>
819 <expand macro="mod_option" value="TMTpro16plex-Lys128N"/>
820 <expand macro="mod_option" value="TMTpro16plex-Lys128C"/>
821 <expand macro="mod_option" value="TMTpro16plex-Lys129N"/>
822 <expand macro="mod_option" value="TMTpro16plex-Lys129C"/>
823 <expand macro="mod_option" value="TMTpro16plex-Lys130N"/>
824 <expand macro="mod_option" value="TMTpro16plex-Lys130C"/>
825 <expand macro="mod_option" value="TMTpro16plex-Lys131N"/>
826 <expand macro="mod_option" value="TMTpro16plex-Lys131C"/>
827 <expand macro="mod_option" value="TMTpro16plex-Lys132N"/>
828 <expand macro="mod_option" value="TMTpro16plex-Lys132C"/>
829 <expand macro="mod_option" value="TMTpro16plex-Lys133N"/>
830 <expand macro="mod_option" value="TMTpro16plex-Lys133C"/>
831 <expand macro="mod_option" value="TMTpro16plex-Lys134N"/>
777 </xml> 832 </xml>
778 <xml name="citations"> 833 <xml name="citations">
779 <citations> 834 <citations>
780 <citation type="bibtex"> 835 <citation type="bibtex">
781 @article{cox2008maxquant, 836 @article{cox2008maxquant,