Mercurial > repos > galaxyp > maxquant

comparison test-data/03/mqpar.xml @ 6:2133b0be850a draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 4e77eeda8a112fb50af00325a5164b986c16fc5c"
author galaxyp
date Wed, 06 May 2020 13:35:51 -0400
parents dcd39bcc7481
children d253b379322b
comparison
equal deleted inserted replaced
5:7f432d87c82c 6:2133b0be850a
75 <maxPeptideLengthForUnspecificSearch>25</maxPeptideLengthForUnspecificSearch> 75 <maxPeptideLengthForUnspecificSearch>25</maxPeptideLengthForUnspecificSearch>
76 <useNormRatiosForOccupancy>True</useNormRatiosForOccupancy> 76 <useNormRatiosForOccupancy>True</useNormRatiosForOccupancy>
77 <minPeptides>1</minPeptides> 77 <minPeptides>1</minPeptides>
78 <minRazorPeptides>1</minRazorPeptides> 78 <minRazorPeptides>1</minRazorPeptides>
79 <minUniquePeptides>1</minUniquePeptides> 79 <minUniquePeptides>1</minUniquePeptides>
80 <useCounterparts>False</useCounterparts> 80 <useCounterparts>True</useCounterparts>
81 <advancedSiteIntensities>True</advancedSiteIntensities> 81 <advancedSiteIntensities>True</advancedSiteIntensities>
82 <customProteinQuantification>False</customProteinQuantification> 82 <customProteinQuantification>False</customProteinQuantification>
83 <customProteinQuantificationFile/> 83 <customProteinQuantificationFile/>
84 <minRatioCount>2</minRatioCount> 84 <minRatioCount>2</minRatioCount>
85 <restrictProteinQuantification>True</restrictProteinQuantification> 85 <restrictProteinQuantification>True</restrictProteinQuantification>
86 <restrictMods> 86 <restrictMods/>
87 <string>Oxidation (M)</string>
88 <string>Acetyl (Protein N-term)</string>
89 </restrictMods>
90 <matchingTimeWindow>0</matchingTimeWindow> 87 <matchingTimeWindow>0</matchingTimeWindow>
91 <matchingIonMobilityWindow>0</matchingIonMobilityWindow> 88 <matchingIonMobilityWindow>0</matchingIonMobilityWindow>
92 <alignmentTimeWindow>0</alignmentTimeWindow> 89 <alignmentTimeWindow>0</alignmentTimeWindow>
93 <alignmentIonMobilityWindow>0</alignmentIonMobilityWindow> 90 <alignmentIonMobilityWindow>0</alignmentIonMobilityWindow>
94 <numberOfCandidatesMsms>15</numberOfCandidatesMsms> 91 <numberOfCandidatesMsms>15</numberOfCandidatesMsms>