Mercurial > repos > galaxyp > maxquant

comparison test-data/04/config.yml @ 6:2133b0be850a draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 4e77eeda8a112fb50af00325a5164b986c16fc5c"
author galaxyp
date Wed, 06 May 2020 13:35:51 -0400
parents dcd39bcc7481
children d253b379322b
comparison
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5:7f432d87c82c 6:2133b0be850a
11 separateLfq: False 11 separateLfq: False
12 lfqStabilizeLargeRatios: True 12 lfqStabilizeLargeRatios: True
13 lfqRequireMsms: True 13 lfqRequireMsms: True
14 advancedSiteIntensities: True 14 advancedSiteIntensities: True
15 matchBetweenRuns: False 15 matchBetweenRuns: False
16 includeContaminants: True
17 quantMode: 1
18 restrictProteinQuantification: True
19 restrictMods: []
20 useCounterparts: True
16 paramGroups: 21 paramGroups:
17 - files: ['BSA_min_23.mzXML', 'BSA_min_22.mzxml'] 22 - files: ['BSA_min_23.mzXML', 'BSA_min_22.mzxml']
18 maxMissedCleavages: 2 23 maxMissedCleavages: 2
19 fixedModifications: [Carbamidomethyl (C)] 24 fixedModifications: [Carbamidomethyl (C)]
20 variableModifications: [Oxidation (M)] 25 variableModifications: [Oxidation (M)]
21 enzymes: [Trypsin/P] 26 enzymes: [Trypsin/P]
27 enzymeMode: 0
22 labelMods: 28 labelMods:
23 - [Arg6,Lys4] 29 - [Arg6,Lys4]
24 - [] 30 - []
25 - [Arg10,DimethLys8] 31 - [Arg10,DimethLys8]
26 32