Mercurial > repos > galaxyp > maxquant

comparison test_mqparam.py @ 9:37d669de2828 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 5e4f8567c0145de8c6f9344fe4ee4c3bf2a81e59"
author galaxyp
date Fri, 19 Feb 2021 21:24:41 +0000
parents dcd39bcc7481
children
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8:ea0a1d50c83f 9:37d669de2828
1 """Tests for mqparam class. If testing a new MaxQuant version, 1 """Tests for mqparam class. If testing a new MaxQuant version,
2 create a new parameter file using '<MAXQUANT_CMD> -c ./mqpar.xml' 2 create a new parameter file using '<MAXQUANT_CMD> -c ./mqpar.xml'
3 """ 3 """
4 4
5 import xml.etree.ElementTree as ET
6
5 import pytest 7 import pytest
6 import xml.etree.ElementTree as ET
7 from mqparam import MQParam, ParamGroup 8 from mqparam import MQParam, ParamGroup
8 9
9 TEMPLATE_PATH = './test-data/template.xml' 10 TEMPLATE_PATH = './test-data/template.xml'
10 11
11 12